Neoarius graeffei (lesser salmon catfish): 132872462
Help
Entry
132872462 CDS
T10798
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04137
Mitophagy - animal
ngra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132872462 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132872462 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132872462 (vcp)
03009 Ribosome biogenesis [BR:
ngra03009
]
132872462 (vcp)
04131 Membrane trafficking [BR:
ngra04131
]
132872462 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132872462 (vcp)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132872462 (vcp)
Ribosome biogenesis [BR:
ngra03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132872462 (vcp)
Membrane trafficking [BR:
ngra04131
]
SNARE
SNARE associated proteins
Others
132872462 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132872462 (vcp)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132872462 (vcp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
AAA_18
ATPase
DUF815
ABC_tran
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
NACHT
Viral_helicase1
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
132872462
NCBI-ProteinID:
XP_060763284
LinkDB
All DBs
Position
24:44463862..44475266
Genome browser
AA seq
808 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRRETVCIVLSDDSCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIG
GLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGSVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKAN
LRKSPISKDVDLDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGG
GGPSQGSAGGSGGNVFNEDNDNDDDLYG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggcggagaatctaaaaatgacgatctttctactgccattctaaaacaaaag
aacagacccaacaggttgatcgttgatgaatccatcaatgaagataacagtgtggtctcc
ctctctcaggccaagatggacgagcttcagcttttccgaggggacactgtgctgctgaag
ggtaagaaaaggagggagactgtttgcatcgtactgtccgatgatagctgctctgatgag
aaagtccgcatgaacagggtggtgcgcaacaacctcagggttcgccttggagatgtcatc
agcattcaaccgtgcccagatgtgaagtatgggaaacgtatccatgtactgcccattgat
gacacagtggagggaatcactggcaacttatttgaggtgtacctaaagccttacttccta
gaggcttaccggccaatccgtaaaggtgatatctttctggtgagaggaggcatgcgtgct
gttgagtttaaagtggtagagactgaccccagcccttactgtatagtggctccagacact
gtcattcactgtgaaggagaacctattaagcgtgaggatgaagaggaatctctgaatgaa
gtaggctacgatgacattggaggtgtgagaaagcagctggctcaaatcaaagaaatggtg
gagttgcccctcaggcacccagcactcttcaaggccattggtgtgaaacctccccgtggt
attcttctgtacggaccccctggaactggaaaaacactgattgctcgtgctgtcgcaaat
gaaactggagcattctttttcctgataaatggccctgaaattatgagtaaactggctggt
gagtctgagagcaacctgcgtaaagcttttgaagaagctgagaagaacgctcctgccatt
atcttcattgatgagctggatgctattgcacccaagagagagaagactcacggtgaagta
gagaggcgcatcgtgtctcagctgctcaccctgatggatggactgaagcagcgggctcac
gtcatcgtaatggccgccaccaacagacccaacagcattgatccagctctcaggagattc
ggacgctttgacagagaggtggacatcggcattcctgatgctacaggaagactggaaatc
ctacagatccacactaagaacatgaagctggccgatgatgttgacctggagcaggttgcc
aacgagacccatggtcatgtgggtgctgatttggctgccctctgctcagaggccgcactg
caggccatccgcaaaaagatggaccttattgatctggaggacgagacaatcgatgcagag
gtcatgaactccctggctgtcaccatggatgactttaggtgggccctgagtcagagcaac
ccgtcagctctccgtgagactgtggttgaggtgcccaacatcacctgggaggacattggt
ggcttggatgatgtcaagagagaactccaggaactggtgcagtacccagtggagcatcca
gacaaattcctgaagtttggtatgactccatccaagggtgtgttgttctatgggccacca
ggttgtggtaaaacgctcctggccaaggccattgccaatgagtgccaggccaacttcata
tccatcaaaggtcctgaactgctaaccatgtggtttggagagtctgaggcgaatgttcgt
gagatctttgataaggctcgccaagctgccccctgcgtgctcttctttgatgagctggac
tccattgctaaagcccgtggtggaagcgtgggcgatggcggtggagcagccgaccgtgtc
attaaccagatcctgaccgagatggatggcatgtccagcaagaagaacgtcttcatcatt
ggcgccaccaacagaccagatatcatcgaccctgccatcctcaggcctggccgtctggat
cagcttatctacatcccactgcccgatgagaaatcccgcatggccattctcaaagctaac
ctcaggaagtctccaatctccaaggatgtagacctggactacctggccaagatgaccaat
ggcttctctggtgctgacttaacagaaatctgccagagagcctgcaaactagctattcgt
gaatccatcgagaatgagatcaggagggaacgcgagaggcagacaaacccatcagccatg
gaagtggaagaggatgacccagtacctgagatcaggaaggaccactttgaggaggccatg
cgtttcgcccgtcgctccgtcagcgacaacgacatccgcaaatatgagatgtttgcacag
accctgcagcaaagcagaggcttcggcagcttcagattcccttccagtaatcagggcgga
ggtggaccaagccaaggttctgcaggaggcagtggagggaatgtcttcaacgaggacaac
gacaacgacgacgacctttacggataa
DBGET
integrated database retrieval system
