Neoarius graeffei (lesser salmon catfish): 132872513
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Entry
132872513 CDS
T10798
Symbol
tsc1a
Name
(RefSeq) TSC complex subunit 1a isoform X1
KO
K07206
tuberous sclerosis 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04140
Autophagy - animal
ngra04150
mTOR signaling pathway
ngra04218
Cellular senescence
ngra04910
Insulin signaling pathway
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
132872513 (tsc1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132872513 (tsc1a)
09143 Cell growth and death
04218 Cellular senescence
132872513 (tsc1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
132872513 (tsc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132872513 (tsc1a)
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Gene cluster
GFIT
Motif
Pfam:
Hamartin
CC_Bre1
TolB_like
ZYG-11_interact
DUF948
Motif
Other DBs
NCBI-GeneID:
132872513
NCBI-ProteinID:
XP_060763389
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Position
24:47923066..47961897
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AA seq
1118 aa
AA seq
DB search
MAKDQPNVFDLLPLLESTDLHDLEQVRSVLQENLSADKGSVLLNGLVDYYLDTSSPQAVD
LLSSIREPHDKHLLDKMNECMAKPSSRLLTLTLLGHVVRKQPPWIHKITRFPLLTSLLKC
LKTESDVVVLISGVLVLVILLPMIQQTSKQLLFEFFDIFGRLAAWNQRNPSHAQGVYAVH
LHASVYSFFHRLYGMYPCNFVSYLRSHYSMKENVDTFEEVVKPMLEHVRIHPELVTGTKD
YELDPIRWKRFETHDIVIECAKVSLDPKEAFCEEGYTSLPDRVPRQLGDSSRSCSDLSTH
GSSSVTSVATVRQSLCLSLPQLTVTQHPSLNPQTPIVQGLEATSSGMKEAVWSPSSVCGM
STPPSFRGMSPTTVSDLSHSASHLSGRVPSTPVDGKWTPFASTPSESSPLPLLLGEFEHT
AQPTSITLPHPKTNQEIKKGATINGKGTGDSLGPFSLMELSDIVKRTEREKEDAIAAELL
TLTQGKPDPLPTPALDTSFSSTTDTSLPLNSNIYTLPHNLVSTPDRVVNHTKGADQQPSW
SLWPCWTPMENSSLSPSAAESTSVELFKGSFSYEHLFDLALPKLASLFVERRTVESQQKA
GREEVEVGDLPATSPLEVLDRLIQQGHDLHEKVLKRSPSSNPSAEPHCGGKHHSTKGKGS
GIPDELALLRSQLLLLHNYLLYERHKREQHALRNRRLLRRIINATALEEQNNSMKAQLRL
QEVEIQTLRVSLQEEQARSKHLQQEGEAQVQQLHSQLQKLQHERHDYCTKTQELQSDLQE
SKKRMDEMEAELQRANNKLCNTGHLLSQLTIKLNNSESLEQQMAFLNKQLLLLGEANKLC
VQEVQRLGPDSHKEKKMLQMCSTRESERLRQSSIQQSQRLEAAQQRITDLETQLTKKEHL
ILEQKKLLENVKNQAKGQLQASENRYLAQKHVTQALQSKMLQLYSQLELTSLSNSTPAGG
TAEPGSPQNQKPKGNDTSGSAQTSESGKREETSYVCVNGELPPLSPGSTLINGSKEEDLP
VLSCSSPLAESFLGMHNQELLKKTKSPYKEEHAHRIHDQGSEPAERRPELTGSQRLAEEE
PELLPPVDRHRARAYNIQRRRRHDLHIMDYNETHQEKT
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggaccagccaaatgtgtttgacctccttccgcttctggaatccacagatctg
catgacctggagcaggttagaagtgtcttacaggagaaccttagtgcagataaagggtct
gtgcttctcaatggccttgtggattattacctggacaccagctctcctcaggctgtggac
cttctgtcctccatcagggaacctcacgacaagcaccttttagacaagatgaacgagtgc
atggccaagccgagcagcaggctcctgaccctgacgcttctcggtcatgttgttcgcaag
cagccgccatggattcacaagatcactcgcttccctctgctcacttcactactcaaatgc
ctcaagaccgagtctgatgttgtggttctgatatctggagtgttggtgttagtcatcctg
ctacccatgatacaacagaccagcaaacagctcctgtttgagtttttcgacatctttgga
cgacttgcagcttggaatcagagaaacccaagccatgctcagggagtgtatgcagttcac
ctgcacgccagcgtgtactcattctttcatcgcctctacggcatgtacccctgcaacttt
gtgtcctacctgcgctcccactatagcatgaaggagaacgtggacacttttgaggaagta
gttaagccgatgcttgagcatgtccggatccatccggagcttgttaccggaaccaaagac
tatgaactggacccgattaggtggaagaggttcgagacccacgacattgtgatcgaatgt
gccaaagtgtccctggaccctaaggaagcgttctgtgaggagggctacacgtccctgcct
gaccgtgtgccacggcaactcggagacagcagcaggtcctgctcagatctcagcacccat
ggaagttcatccgtcacctcagtggccacagttcgccagtccctttgcctttccttaccc
cagctgacagtcactcagcacccaagcctcaatccacagacccccattgtacagggtctt
gaggcaacgtcctcagggatgaaggaggccgtgtggagcccttcctctgtgtgtgggatg
agcacccctcccagcttcagaggaatgtcccccaccaccgtctctgatctctcacatagt
gcctcccacttgtcagggcgggtcccgagcacaccagtggatgggaagtggactccgttt
gcatccacgccctcagagtcctcccctctcccgttgctcttgggggaatttgagcacact
gcccaacccaccagcattactctcccacatcctaagacaaatcaggagataaaaaaaggc
gcgactatcaacggcaaaggtacaggcgacagtcttggtcctttttcattgatggagctc
tctgacattgtgaagaggaccgagagagagaaagaagatgccatcgcagcagagctgctg
acactaacccagggcaaacctgacccgctccccacgccagccctggatacatccttctcc
agcaccacagacacatccctccccttaaactccaacatttataccctgcctcataacctg
gtctccaccccagacagggtggtgaaccacactaaaggagcagaccagcagccttcctgg
agcttgtggccctgttggactcccatggagaactcctccttgagcccttctgcagctgaa
agcacctccgtggagctgtttaagggctcgttctcttacgagcatctctttgacctggcc
ttgccaaagctggcgtctctgtttgtggaaaggaggactgtcgagtctcaacagaaggct
ggcagagaggaggtggaggtgggggatctgcctgctacgtcccctctggaggtgctggat
cgtctcattcagcaaggtcatgaccttcatgaaaaagtcttgaagagatctccttcgtca
aacccctcagctgagccgcactgtggaggtaaacatcacagcactaaaggaaaaggctcc
ggaatccctgatgaactggcactgttgcgcagtcagctgctgctcctgcacaattatctg
ctttatgagaggcacaaaagagagcagcacgcactgcgcaaccgccgcctactccgccgt
atcatcaacgccactgcgctggaggaacagaacaactcgatgaaggcccagctgcggttg
caggaggtggagatccagactctgcgggtgagtctgcaggaagagcaggcgcgctccaaa
catctgcagcaggaaggagaggcgcaggtgcagcagctccacagccaactccagaagctt
cagcacgagaggcatgactactgtaccaagactcaggagctccagagtgacttgcaggaa
agtaagaagagaatggatgagatggaggcggagctacagagagctaataacaaattgtgc
aatacgggacatctgctcagccagctgactatcaagctcaacaacagtgaaagcctggag
caacagatggccttcttgaacaaacagctgttactgctgggcgaagccaataaactgtgt
gtacaggaagtccagcgcctcggaccggactcgcataaagagaagaagatgctgcagatg
tgctccacacgagagagcgagcggttgaggcagagctccatccagcagagccagaggctg
gaggcggcccagcagcgcatcactgacctggagacccagctcaccaagaaagagcacctc
atcctggagcagaagaaactcctggaaaatgtcaaaaatcaggccaaagggcagctgcaa
gcttctgagaacaggtatcttgcccaaaagcatgtgactcaggcgctacagtccaagatg
ctccagctgtacagtcagctcgagctcaccagcctctcaaacagcacaccagcaggagga
acagctgaaccaggcagccctcaaaaccagaagccgaaaggcaacgatacctccggttca
gctcaaacctccgagtcagggaaaagagaggaaacttcttacgtgtgcgtgaacggcgag
ctgccaccgctgtcccccggatcaacgctgatcaacggcagtaaggaagaagaccttccc
gtcctgtcctgcagctctcctttggccgagagcttcctgggaatgcacaaccaagagctg
ctgaagaagacgaagagtccatataaggaagagcacgcccaccggattcatgaccagggc
tccgagcctgctgaaagacgccctgagctcacaggatcccagaggctggcggaggaagaa
cccgaactcctcccgcctgtggatcggcacagagctcgcgcttacaacatccagaggcgc
agacggcacgacctgcacatcatggattacaacgagacccaccaggagaagacataa
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