Neoarius graeffei (lesser salmon catfish): 132872532
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Entry
132872532 CDS
T10798
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03030
DNA replication
ngra03410
Base excision repair
ngra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132872532 (pole)
03410 Base excision repair
132872532 (pole)
03420 Nucleotide excision repair
132872532 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngra03032
]
132872532 (pole)
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132872532 (pole)
Enzymes [BR:
ngra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132872532 (pole)
DNA replication proteins [BR:
ngra03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
132872532 (pole)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
132872532 (pole)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
DUF8375
Motif
Other DBs
NCBI-GeneID:
132872532
NCBI-ProteinID:
XP_060763411
LinkDB
All DBs
Position
24:complement(49772265..49927462)
Genome browser
AA seq
2283 aa
AA seq
DB search
MVLQNSGRYKADRSGGADQEKQQDDVSTLSAVKRLERSQFTDEMDARYGFERMKEPGEKT
GWLINMHPTEILDDDKRMISAVDYYFVQEDGSRFKVALPYKPYFYIATRKNCEREVVSFL
SKKFQGKIAKLETVPKEDLDLHNHLVGLKRTYIKLSFNTVDDLVRVKREISPAVRKNRER
ENSNDAYTSMLSSALVGGSVMTADEDGTSKKMADQLDNIVDMREYDVPYHVRLSIDLRIH
VAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAALIQRWFEHIHETKPNIF
VTYNGDFFDWPFVETRAAHHNLNMYQEIGFQKDSQGEYKSSQSIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAVEEEEKIPLEQVTNFNEV
CDDIRKKLTCLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGKPRAFHELNREEQARHE
KKRLGDYCRRAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SVAQENGDAAEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCHTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKATNEKKPKVTISYPGAMLNI
MVKAGFTNDQYQELVDPASLTYQTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAESSIKKHFLRKWLKMPSLHDMDIRSILDWGYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISEMFTSEGKRQVTNQL
EPGETTDMEDFGAPQRPLQPAILVSTKRKRASKADDSQTESQELELTQSWREILGPPPPM
GTTQEERLVWLRYHKKKWELQIRQRKERRKRRRMLDGEAQPTGGGVIRGGPSTGLGNFLR
RTARSILDMPWQIVQIAETSHPGLYKLWAVIGTDLHCMKLNIPRVFYVNQRVPKQDEGAT
YKKVNRILPRSNVVYYLYQYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQ
LGCVCMVNKQVVRALAGREADTFELDHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALF
GLFIPSQRKASVFVLDTVRSNQMPNLSTLYGAERTALLEKTSEELLPPEKHLFEVRAEND
IKAIHRAVQRILLSYKEERRGPTLIAVQSNWELRRLVAGMTVLEEFPVVPVHVTDDISYS
VLDWQRHGARRMIKHYLNLDSCLSHAFDMARYYHLPIGNLPEDISIFGSDLFLARHLRKH
NHLLWLSPTARPDLGGKEADDSRLVMESDERGSVEINAPGCFSTVCVELDIQSLAVNTIL
QSQHVNDMEGGASMGVSFDVIQHASLEDMMSGNQGVTAVASYDETALCSNTFRILKSMVV
GWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLG
SSVVYGNFNRIILSTKKRRIDDAIAYVEYITNSIHSREIFHSLSITFSRCWEFLLWMDPA
NYGGVKGNVPSSIMYGETDKKKKGKEEGEDEGSEDDDEVDEPEEERDREEDEVEDLIESN
WNIMQYLPQAASCQKYFLLIISAYIAAVYHSMREELRRNAPGATPIKRRGGSQASQQPAG
DVSALPGMITFSQEYVSSELTQNIFTITQKIQKKVCGTRSVTQPSEMFPVLPGSHLPLNN
PALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVEVGEFSEEAQFRDPCNSYVLPEVICH
QCNFCRDLDLCKDPSVAQDGSVLPQWFCSNCQAQYDTDSIEMTLVEALQKKLMSYTLQDL
ECAKCQGVKEANMPLYCSCAGDFRLTFSTKSFTEQVDVFRSIAVHYNMNFLLETIDWILR
MNS
NT seq
6852 nt
NT seq
+upstream
nt +downstream
nt
atggttttacagaacagcgggagatataaagcagaccggagtggaggagcagatcaggag
aaacagcaagatgacgtgtctactttgtccgccgttaagcgactcgaacgcagtcagttc
accgatgagatggacgcacgctacggcttcgagcgcatgaaggagccgggagagaaaacc
ggctggttgatcaacatgcatccgacagagattctggatgatgataagcggatgatcagc
gcagtggattattactttgttcaggaggacggcagcaggtttaaggtggcgctgccgtac
aaaccgtacttctacatcgccacgagaaagaactgtgagagagaagtcgtctccttctta
tcaaagaagttccaaggaaagatcgccaagctggagaccgttcccaaagaggatctcgac
ctgcataaccacctggtgggactgaagaggacgtacattaaactgtcctttaacacggtg
gacgatctggtgcgagtgaagcgggagatctcgcctgcggtgaggaagaacagagagagg
gagaactccaacgatgcctacaccagcatgctgtccagtgcacttgtaggtggaagtgtg
atgacggctgatgaagatggcacgtctaagaaaatggctgaccagctggacaacattgtg
gacatgcgagagtacgatgtgccttaccatgtcagactgtccatcgacctcaggatccac
gtggcccactggtataacgtacggtacagaggaagtgcgtatcccccggagattgtgcgt
cgggatgaccttgtggaaagaccagatcctgttgtcttggcgttcgatatcgagaccacc
aaactccctctgaagttccccgacgcagaaacagaccagatcatgatgatctcgtacatg
attgatgggcagggtttcctcatcaccaacagagagattgtctctgaggacatcgaggat
ttcgagttcacccctaagccggagtacgagggccctttcactgtgtttaacgagcctgat
gaggctgctctgattcagcgatggttcgaacacatccacgagaccaaacccaacattttt
gtcacctataacggggacttcttcgactggccgtttgtcgagactcgggcagctcaccac
aacctcaacatgtaccaggagatcggttttcagaaggacagccagggcgagtacaagtcc
agccagtcgattcacatggactgcctcaggtgggtgaagagagacagctacctgcctgtc
ggaagccacaatctgaaagcagcagccaaggccaaactgggttacgaccctgtggagttg
gaccctgaagagatgtgccgcatggccaccgaggagccgcagacgttggctacgtactcg
gtgtccgatgccgtggcaacctactacctctacatgaaatacgttcatccgttcatcttc
gccctgtgcaccatcattcccatggagcctgacgaggtgttgcgtaagggttcagggacg
ttgtgcgaggcgttgttgatggtccaggctttccacgccaacatcgttttcccgaataag
caggagcaggtgttcaataagctgaccgacgacggccacgttctggactcggagacctac
gtgggcggccatgtcgaggctctggagtccggagtgttccgcagtgacatcccgtgccgc
ttcaaaatgaatccggcagcgttcgacttcctgctgcagagggtggagcggactctgcgt
cacgctgttgaagaagaggagaagatcccactggagcaagtcacgaactttaatgaggtt
tgtgatgacatcaggaagaagctgacctgtttgaaagaagtgccgaacaggatcgagtgt
cctctgatttaccatctggacgtcggggccatgtaccccaacatcatcctgaccaataga
ctgcagccatctgccatggtggacgaggcgacctgtgctgcgtgtgattttaataaacct
ggagctacctgccagcggaggatggcctggcagtggagaggagagatcatgccggcgagt
cgtagtgagttccaccgaattcagcagcagttggagtctgagaagttccctcctctgttt
ccgaacggaaaaccacgtgccttccacgagctcaacagagaggaacaggctcggcacgaa
aagaaacgtctgggagactactgtcgaagggcctataagaaagtgcacttgacgaggctg
gaagagagagtcacgactatatgtcagagagagaattccttctacgtggacacggttcga
gcgttccgagatcgccgctatgagtttaaaggcctgcataaggtgtggaagaagaagctg
tctgtggctcaggagaacggtgacgcggcggaagtgaagcgctgtaagaatatggagatc
ctttacgactccctgcagctcgcacataaatgcatcctcaattccttctacggttacgtc
atgagaaaaggagcgagatggtactccatggaaatggccggcattgtgtgtcacaccgga
gccaacatcatcacacaggccagagagctgatcgaacagatcgggaggcctttagagctg
gacactgacggtatctggtgtgtcctgccgaactccttccctgagaacttcgtcatcaag
gccaccaacgagaagaagcccaaagtgaccataagttaccccggggccatgctgaacatc
atggttaaggcaggctttaccaacgatcagtaccaggagctggtggacccggcctcgctc
acgtaccagacgaggtcagagaacagcatcttctttgaggtggatggaccgtacctggcc
atgatcctgcctgcgtctaaagaggagggcaagaagctgaagaagagatatgccgtgttt
aacgaggacggctctctggctgagctgaaggggttcgaggtgaagagaagaggagaactc
cagctcattaagatcttccagtcgtccgttttcgaggctttcctcaaaggcaccactctg
gaggaagtctacgcctcggtcgccaaagtagccgactactggctggatgtgctctacagc
aaggcggcgaacatgccagacgcagagctcttcgagttgatttctgaaaaccgctccatg
tcccggaagctggaagactacggcgagcagaaatccacgtccatcagcacagccaaacgt
ctggcggagtttctcggagatcagatggtgaaggacgcaggtctgagctgtcgctacgtc
atctctcgcaaacccgagggctctcccgttactgagagggcgattcctttggccatattc
caggctgaatccagtattaagaagcacttcctgcgcaaatggctgaagatgcccagcctc
catgacatggacatcagatcgatcctggactggggttactacattgagagattgggcagc
gccattcagaagatcatcaccattccggcagcactacagcaggtgaaaaacccagtgccg
cgagtgcgtcatccggactggctgcataagaagcttctggaaaagaacgacatctacaag
cagaagaaaatcagcgagatgttcaccagtgaaggaaagagacaggtgaccaatcagctc
gagccaggcgagacgaccgatatggaggattttggagctccgcagcgccccctacagcct
gccatcctcgttagtactaagaggaagcgagcatctaaggctgacgacagccagactgag
tctcaggagctggagctcacacagtcctggagagagatcctgggtcctccgccacctatg
ggtacaacacaggaggagaggctggtgtggctgcggtaccataagaagaagtgggagctg
cagatccggcagaggaaagagcgaaggaagagacggcgcatgctcgacggagaggctcag
ccaaccggaggcggagtgatcaggggcggaccaagcacaggacttgggaacttcctccgc
aggacagcccggagcattctggacatgccctggcaaatcgtacagattgcagaaaccagt
cacccaggcctgtataagctgtgggcggtgatcggtactgacctgcactgcatgaagctt
aatatcccacgagtcttttatgtcaatcaaagagtgcccaagcaggacgagggggccacg
tataaaaaggtgaaccggattttgccgcgctccaacgtggtgtattatctgtaccagtac
tctgtgcctgaggacatgtatcaggaacacatcaatgagatcaatgcagacctttctgcc
ccagacatagagggcgtgtacgagacacaggtgccgctgttgttccgggcgctggtgcag
ctcggctgcgtgtgtatggtcaataagcaggtggtgagggcgctggctggccgggaggcc
gacaccttcgaactggatcatctggagatgaggtcactggctcagttcagctacttggag
ccaggcagcgtgaggcacatctacctgtaccatcacagtcagggccacaaggctctgttc
ggcctcttcatcccctctcagcgcaaagccagcgtcttcgtcctcgacacggttcggagt
aaccagatgccgaacttgagtactctgtatggagcggagcgcactgcgctgttagagaag
acctcagaggagctgctgcctccagagaagcacctgtttgaagtgcgtgccgagaacgac
atcaaggctattcaccgcgcagtgcagcgcattctgctcagctataaggaggagcgtcgt
ggtcccactctgatcgctgtacagtctaactgggagctgcggcgtctggtggccggtatg
accgtcctggaggagttccccgtggtccccgtgcacgtgacggacgatatcagctacagc
gtgctggactggcagcggcacggcgcacgccgcatgatcaaacactatttaaacctggac
agctgtctttcacacgccttcgacatggccaggtattaccacttgcctatcgggaacctg
cctgaggacatctccatattcggctcggacctctttctggcacggcacttgcggaagcac
aaccacctgctgtggctttcccccacagcgagacccgacctcgggggcaaggaagccgac
gacagccgcctggtgatggagagcgacgagcggggctccgtggagatcaacgccccggga
tgcttctccacagtgtgtgtggagttggacattcagagcttagcagtgaacacaatcctc
cagtcgcagcacgtgaacgacatggagggcggggccagcatgggcgtgagttttgatgtc
attcagcacgcgtcactggaggacatgatgtcgggaaaccagggggtgacggcggtagct
agttacgatgagactgcactctgctccaacacattcaggatcttgaagagtatggtggtt
ggctgggtgcgggagatcacccagtaccataacgtatacgcagataatcaggtgatgcac
ttctaccgctggctgcgctccccgagctcactcctgtacgacccggcgctgcaccgcacg
ctgctcaacatgatgaagaagattttcctccagctggttgccgagtttaagcggctcggt
tcttctgtggtctacgggaactttaaccgcatcattctcagtaccaagaaacggcgcatt
gatgatgccatcgcctacgtggagtacatcaccaacagcatccattcacgggagatcttc
cactccctgtccatcaccttctcccgatgctgggagttcctgctgtggatggatccagct
aactacggaggagtgaaagggaacgtgccctccagcatcatgtacggagagacggacaag
aaaaagaaaggaaaggaggaaggagaggatgagggcagtgaggatgatgacgaggttgat
gaaccagaggaagagcgagacagagaggaagatgaggtggaggacctgattgagagcaac
tggaacatcatgcagtacctgcctcaggctgcttcctgtcagaaatacttccttttgatc
atctcagcgtacattgctgccgtgtatcacagcatgagggaggagctcaggcgaaatgct
cctggagccacgcccataaaaagacggggcggaagccaagcgtcccaacagcctgccggt
gacgtcagtgcacttcctggcatgatcacgttctctcaggagtacgtgtcaagcgagctc
acgcagaacatcttcaccatcacacagaagatccagaaaaaggtgtgtgggacacgcagc
gtgactcagccgtctgaaatgttccccgtgctgccaggatcacacctgcccctcaacaac
cccgcgctggagttcatcaaatacgtctgtcaggttctctcgctggacgctaacatcgtg
aaccaggtcaataagctgaagcgggatctcctgcgcttggtggaggttggcgagttctcc
gaggaggctcagttccgtgatccctgcaactcctacgtcctgccagaggtcatctgccac
cagtgcaacttttgccgtgaccttgacctctgcaaggacccttccgtagcccaggacggc
tcggtcctgccgcagtggttctgctccaactgtcaggcgcagtacgacaccgactccata
gagatgactctagtagaggctctgcagaaaaagctgatgagttacacgctgcaggacctg
gagtgtgcgaaatgccaaggggtgaaggaagccaacatgccgctgtactgcagctgcgca
ggagacttcaggctcaccttcagcacaaagagcttcacagagcaggtcgatgtgttcaga
agcatcgctgtccattacaacatgaacttcctgctggagaccatcgactggatcctcagg
atgaacagttag
DBGET
integrated database retrieval system
