Neoarius graeffei (lesser salmon catfish): 132872537
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Entry
132872537 CDS
T10798
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03030
DNA replication
ngra03410
Base excision repair
ngra03420
Nucleotide excision repair
ngra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132872537 (rfc5)
03410 Base excision repair
132872537 (rfc5)
03420 Nucleotide excision repair
132872537 (rfc5)
03430 Mismatch repair
132872537 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ngra03032
]
132872537 (rfc5)
03036 Chromosome and associated proteins [BR:
ngra03036
]
132872537 (rfc5)
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132872537 (rfc5)
DNA replication proteins [BR:
ngra03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132872537 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
132872537 (rfc5)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132872537 (rfc5)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132872537 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
132872537 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_assoc_2
ResIII
AAA_24
DEAD
DUF815
TIP49
AAA_19
AAA_7
PhoH
ATPase_2
AAA_30
TniB
AAA_5
nSTAND3
DNAX_ATPase_lid
AAA_2
Mg_chelatase
FKRP_N
Motif
Other DBs
NCBI-GeneID:
132872537
NCBI-ProteinID:
XP_060763417
LinkDB
All DBs
Position
24:complement(50204414..50222612)
Genome browser
AA seq
334 aa
AA seq
DB search
MASTSKAPSQNRNLPWVEKYRPQKLDDLISHQDILSTIQKFIREDRLPHLLFYGPPGTGK
TSTILACAKQLYKDKEFNAMVLELNASDDRGIDVVRGPILSFSSTRTIFKKGFKLVILDE
ADAMTVDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQTQMIPRL
EHVIQQESVDITPDGMKAIVTLSTGDMRRSLNILQSTHMAYGKVTEETVYTCTGHPLRSD
IANILDWALNKDFTAAYNQILQLKTLKGLALHDILTELHLLIHRVDFSPAIRMGLLIKLA
DIEYRLASGTSEKIQLSSMVAAFQAVRDIVVSDG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaagcaaggcaccatctcagaacaggaatttgccttgggttgagaagtac
agaccacagaagctggatgatttgatctcacatcaggacattctgagtacaattcagaag
ttcatcagagaagaccgactgcctcacctgctgttttacgggcctccgggaacaggaaag
acctccaccattttagcctgtgcgaagcagctctacaaggataaagagttcaacgccatg
gttctggagctcaatgcttcagatgaccgtggtatagatgtggttcgaggccccatcctc
agcttctccagcaccaggaccattttcaagaaaggttttaagttggtgattctggacgag
gcggatgccatgaccgtggacgctcagaacgctttaaggagagtgattgagaagttcaca
gagaacactcggttctgtctcatctgtaactacctttctaaaatcatccctgcgctgcag
tcccgatgcacacggttccggttcggacctctgtcccagacccagatgatccccagactg
gagcacgtcatccagcaggagagcgtcgacatcactccagatggcatgaaggctattgtg
actctgtcaacaggagacatgaggcgatcgttaaacattctacagagcactcacatggcc
tacgggaaggtgacggaggagacggtgtacacgtgcacaggacatcctctacgctcagac
atcgccaacatactggactgggccttgaacaaagacttcaccgcagcgtataaccaaatc
ttacagctgaaaactctgaaaggtttagcgctgcacgacattctgaccgagctgcatctt
ctcatacacagagtggatttctcgccagcgattcggatgggcttgctgattaaacttgca
gacatcgagtatcgcctggcctctggtactagtgagaagattcagctgagttctatggtg
gccgctttccaggcagttagagacatagtggtcagtgatggctaa
DBGET
integrated database retrieval system
