Neoarius graeffei (lesser salmon catfish): 132872607
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Entry
132872607 CDS
T10798
Symbol
trmt2a
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog A isoform X1
KO
K15332
tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132872607 (trmt2a)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
132872607 (trmt2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
Methyltransf_4
Methyltransf_11
RRM_1
MTS
Ubie_methyltran
Methyltransf_15
PrmA
Cons_hypoth95
RRM_PARP14_3
Methyltransf_23
N6_N4_Mtase
Methyltransf_32
RrnaAD
CMAS
Methyltransf_12
UPF0020
RRM_occluded
RRM_fung
Methyltransf_18
TPMT
FtsJ
PB1
Motif
Other DBs
NCBI-GeneID:
132872607
NCBI-ProteinID:
XP_060763515
LinkDB
All DBs
Position
24:complement(57935005..57952853)
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AA seq
617 aa
AA seq
DB search
MADVISDSSILNDSAAPVEESSIQPEPPQEKNQQEEPAAERKTEGEDCEERSNSDLYRYI
KEDMFTSEIFKVEIQNLPKYIGFSDVKKYLNKHGLNPHKIKLMGKQNFAFVTFKNQEDRD
KAMKLVHGMQWKGKVLSVRLAKPKADPLLRKRRQDEEAADGGEPAPKRPAEGHDGPEDEP
LSVQIANAVTPLWQVPYDEQLRRKEQEVEAVLHTLTREIGRSNKAMLPWLFVQKEKNKGV
CCALGPIRPSPVQTEYRNKCEFEIGTGADGEDKTVGFRLGKYKGGSCAVVSPSDTIHIPA
AAKRVVLAFQNYIRTTPYAVYSPETYEGHWRQLTVRTSRTNQIMAIVVFHPQKLSEDETA
SLKESLRNYFTDGEGRDSGVTSLHFVRMGQRTSAGTDDLPCELVAGDAWIHEELLGLRFR
ISPHSFFQTNTLAAEVLYSSVGDWAQLDRDSTVLDVCCGTGTIGISLAKRVRKVIGIELC
QEAVDDAKVNAQANGLTNIEFHCGKAEDIFPTVLNAVVSPNITAIVDPPRAGLHSKVILA
IRRAEHLKRLVYVACNAKAAMNNFIDLCRAPSNRVRGAPFRLVRAMAVDLFPQTMHCETI
LLFERVDYGSNTSDAKN
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtgatttcggactcctccatcctgaacgattcagcagcccctgtggaagag
tccagcatccagccagaacctccacaggagaaaaaccaacaggaggaacctgcagcagaa
agaaagactgaaggagaagattgtgaagagcgcagcaactctgacctctaccgttacatc
aaggaggacatgttcacctccgagatcttcaaggtggagatccagaacctgcccaagtac
attggcttcagcgatgtgaagaagtacctgaacaaacatgggctgaacccgcacaagatc
aagctgatggggaagcagaactttgcctttgtcaccttcaaaaaccaggaggacagggac
aaggccatgaagctggtccatggcatgcagtggaaggggaaggtcctgagcgtgcgattg
gccaagcccaaagccgacccgctcctcaggaagcgcaggcaggacgaagaggcagcagac
ggaggagagcctgcgcccaaacgtcctgctgagggacacgacggccccgaggacgaaccc
ctcagtgtccagattgccaatgcggtcacacccctgtggcaggtcccgtacgacgagcag
ctcaggaggaaggagcaggaggtggaggcggtcctgcacacgctcaccagggaaataggt
cgcagtaataaagccatgctgccgtggctgtttgtgcagaaggagaagaataaaggtgtg
tgttgtgcgctcgggcccatcagaccctcacctgtacagacagagtacaggaacaagtgt
gagtttgagatcggtaccggtgcagatggagaggataagacggtgggatttcgcttgggg
aagtataaaggaggctcgtgtgctgtggtgagtccctcagataccatccacatccctgca
gcagccaaacgcgtcgtccttgctttccagaactacatcaggacaactccgtatgctgtg
tacagtccagagacgtacgagggtcactggaggcagctcaccgtccgcacaagcagaacc
aaccagatcatggctattgtcgtcttccatccacagaaactgtccgaggacgagacggcg
tctctgaaggagtctctgagaaactattttacagacggcgaggggagggacagcggggtt
acatctctgcacttcgtgagaatgggacagaggacgtctgcagggacggacgatctgccg
tgtgagctggtggccggtgacgcgtggatccacgaggaactgctcgggctcagattccgc
atttctcctcactccttcttccagacgaacactctggcggcggaggtgctctactcctct
gtaggtgattgggctcagctggaccgtgacagcaccgtgctggatgtgtgctgtggaaca
ggaaccatcggcatctccctggccaagagagtgaggaaggtgattggaatcgagctgtgt
caggaggcagtggacgacgctaaagtgaacgcacaagctaacggtttgactaacattgag
ttccactgtggtaaagcagaggacattttccccaccgtactcaacgctgtggtgtctccg
aatattactgcgattgtagatcctccacgagcaggactgcattccaaggtgattttggcg
atcagacgggcggagcatctgaagaggctggtgtatgtcgcctgtaatgcgaaagcagcc
atgaacaacttcattgatctgtgcagagctccatctaaccgtgttcgtggagcaccgttc
cgtctggtgcgagcgatggctgtggatctgttccctcagaccatgcactgcgagaccatc
ctgctgttcgagagggtcgactacggctccaacacctccgacgccaagaactga
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