Neoarius graeffei (lesser salmon catfish): 132872817
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Entry
132872817 CDS
T10798
Symbol
caprin2
Name
(RefSeq) caprin-2
KO
K18744
caprin-2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132872817 (caprin2)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
132872817 (caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
BclA_C
Motif
Other DBs
NCBI-GeneID:
132872817
NCBI-ProteinID:
XP_060763895
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All DBs
Position
2:complement(45247247..45275340)
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AA seq
949 aa
AA seq
DB search
MRETRAMVQLFPSPASDAMVLSESAEERDVRPDGSSSAESPRALSALQLALNPSATVYHG
YETYIEDGLLCLRHKIRNIEKKKLKLEGYQMRLKNGETLNQDQMDAIGRYDEAVHNLKFA
KELEKTLCSLTQDLLKAQRKAMRREQIQRAETEQRRLSTMLQVQYILCTLQRHDLKKIFN
AYERARYLPVPEVDKLLNLASLLACKRDQSMSLEDQMERASFVYLDLLNGSDQPVAGSTY
KYLKEKLLRLVDSGLFNHIPEPKKEDGQKPDASSKSSAPSAVVSLNSDMASRQFLNRRYT
MERDLVGPGQGEDLNVQSSWKAEFLALKEQEPPDSWDMEFSDPPESSKTELQKPWKETSG
FIPKTTVTVESAAAVETKPKQQGKNKGNQDSKLDGEVKKAVPVEVFDSPSSLAKDPALRK
QQLDHLMGQITGSFSFIQDSFLDGEATSGNGRTRGLHPSPVATPLAQRQLKKIPADILPP
SQNSTPPPLHTQQCPGDAPSTLVNGDQISKTSDLKLHTEDGPHAKQEKGFTPPPLYCREP
CISSGPCEDKSSKQEEKQPLSNGDVPPPVLAQTFSTPPSRRSLPVTTTSFGSLHSVFSAE
VPMTRSSELKSDEGGFLGSARLSYSTASTLSHSTASTQTPPELSVPQDDLQMECAYLSES
DISATSHIYSSPSLNSAPQSNLVQHYYPRSTLRGMTHSARGFSHASLRSSGASRGGYEVH
RVNLRTQGGSFSAQAHREPGSVLYTSQENGYQPSHKRTGGTAARRNSSVAGWSDSSQVSS
PDREGSYIIDSAHGDSLAITPITGPPPSHTLMPVYPQLRVAFSAARATNLAPGTLDQPIT
FDLLHSNQGGAFDAPSGHFSCPAAGTYVFFFHILKLAISVPLYVNLMRNDEVVASAYAND
GAPDHETASNHAVMPLRVGDHIWLRLHRGAIYGSSWKYSTFSGFLLYPD
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagagagacacgggccatggttcagctgtttccgtctccagcctcggacgccatggtg
ctctcggagtcggcggaagaaagggatgtccgaccggatggcagctcgagcgctgaatct
cctcgtgctctctcggccttacagcttgccctaaacccctcagccactgtctaccatggg
tatgagacctacatcgaggacgggctcctctgtcttaggcacaagatccgcaacattgag
aaaaagaagctcaagctggaaggttaccaaatgcggctaaagaatggggaaacgctgaat
caagaccaaatggatgcaatagggaggtatgatgaagcggttcacaacctgaagtttgcc
aaagagttggagaagaccctttgttctctcactcaggatctgttgaaggctcagaggaag
gccatgcggcgcgagcagattcagagggcggagaccgagcagaggcgtttgagcacgatg
ctgcaggtgcagtatatcctctgcactctccagaggcacgacctcaagaaaatcttcaat
gcatatgagcgtgcacgctacctgccagtgccggaagtggataagctgctaaacctggct
tcattattagcttgcaagagggatcagagcatgagtttggaggatcagatggaacgggca
tcttttgtttacctggacctgttgaatggtagtgaccaaccagttgctggctcgacatat
aaatacctcaaggagaagctgctcagactagtggattctggtttattcaatcacatccca
gagcctaaaaaggaggatggacaaaaacccgatgcttcatcaaaatcaagtgccccatct
gcggtggtcagtttaaactctgatatggcttcaaggcagtttttaaacagacgctacaca
atggagcgtgacctcgtgggacctggtcagggtgaggatctgaatgtgcaatcaagctgg
aaagcagagtttttagccctgaaggaacaggaaccaccagactcttgggatatggagttt
tctgatccaccggagtcctccaaaacagagttacagaagccttggaaagaaacctcaggg
ttcatccccaaaaccacggtcactgtggagtctgctgctgctgtcgagaccaaaccgaag
cagcagggaaaaaataaaggaaaccaggactccaaattggatggtgaggtgaagaaggct
gtacctgtggaggtgtttgactctccatcctctttggctaaagatcctgccttgcgcaaa
cagcagctggatcacctgatgggtcagatcactggctccttcagctttattcaggattcc
tttctggatggagaagccacatctggtaatggccgaaccagagggctgcacccgtctcct
gtcgccactcctctggctcagagacagctgaagaaaatcccagctgacatcctgcctccg
tctcagaattcgactcctcctcctcttcatacccagcagtgtcctggagatgccccaagc
acactggtcaatggtgatcagatctcaaaaacctctgacctgaagcttcatactgaagat
ggaccacatgcaaagcaagagaagggcttcacccctccacctctttactgcagagagccc
tgtatctcctctggaccttgtgaggacaagagctcgaaacaggaagaaaagcagccactt
tctaatggagatgtgcccccacctgttctggcacagaccttctccactccacccagcaga
cgatctctacctgtgaccaccacatccttcggcagcctgcactctgtgttcagtgcggag
gttcctatgaccaggagctctgagctgaaatctgatgaaggtggctttttaggatctgca
cgtctgagctacagtacagcaagcacactgagccactccactgctagcacacagacccca
cctgagctcagcgtgccacaagatgacctgcagatggagtgtgcatacctatcagaaagt
gacatcagtgctaccagtcacatttattcatctcctagtctgaattctgcccctcagtct
aatctggtccagcattattacccccgcagtactctaagaggtatgacgcacagcgcaaga
ggattctctcacgcctcactccgctcatctggggcttccagaggtggctatgaggtgcac
agagtaaatttgcgtactcaaggagggagcttcagtgcccaagcccatcgtgagcctgga
tctgttctatacacctcccaggaaaacgggtatcagccaagtcataaacgtactggagga
acagcagctcggaggaacagctcagttgcaggttggagcgactcctcccaggtgagcagc
ccagaccgagagggcagctatataatagactcagctcatggagactctctggcgatcacg
ccaatcactggcccacctccttctcacaccctgatgcctgtgtatccgcaacttcgtgtg
gccttttcagctgcccgtgccacaaacttggcaccagggaccctggaccagcccattact
ttcgacctgctccacagcaaccagggtggtgcatttgatgcaccttctggccacttttcc
tgtccggcagcaggcacgtacgtcttctttttccatatccttaagctggcaatcagcgtg
ccgctgtacgtcaatctgatgcgcaacgatgaggtagtggcttcagcatatgccaacgac
ggtgcacctgaccatgagacggccagcaaccatgccgtgatgcctctgcgcgtcggtgat
cacatctggctgcgcctccaccgtggtgctatctacggcagtagctggaagtatagcacc
ttctcaggcttcctgctctatccagattga
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