| Entry |
|
|---|
| Symbol |
lingo1a
|
|---|
| Name |
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
|
|---|
| KO |
| K23533 | leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein |
|
|---|
| Organism |
ngra Neoarius graeffei (lesser salmon catfish)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:ngra00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:ngra04131]
132872989 (lingo1a)
Membrane trafficking [BR:ngra04131]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
132872989 (lingo1a)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
2:51129462..51194959
|
|---|
| AA seq |
615 aa
MVAVEVSGHSYLVACWQPILILMLATVLSGSTTGCPSRCECNAPERAVVCHRKKLMSIPE
GIPSETRFLDLSKNRIKTINPEEFSGFPNLEELELNENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLNSLEHLTLEKCNLTSVPTEAFTHLHSLNILCLRNLNINSIRDYSFKRLSRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYVALRHLVYLRFLNMSYNPIVIIEGNKL
HDLLRLQEFHLVGGRLAIIEPYSFRGLNYLKILNVSGNALTTLEESAFHSVGNLETLVLY
GNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDILQPNYFTCRKSRIR
DRKAQQTYVDEGTTVHFACQADGDPAPVIMWLSPQKQLVTPKTIGRLTMFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTAVAHLHVHSYSPDLLNQSNKTFAFISNQPTDSGANETKAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGLS
SGNADAPRKFNMKMI |
|---|
| NT seq |
1848 nt +upstreamnt +downstreamnt
atggtggcagtggaagtaagtgggcacagctacctggtggcatgctggcagcccatccta
attttaatgcttgccactgtgctatccggctctaccacaggctgtccatcccgctgcgag
tgtaatgccccggagcgtgctgttgtgtgccaccgtaaaaagttgatgtcaattcctgag
ggtattccatctgagacaaggttcctagacctcagtaagaaccgcattaaaacaattaac
ccagaggagttctctgggtttcccaacttggaggagctggaattgaatgaaaacaccata
tccaccattgaacctggggcctttaacaacttgtatggccttcggactctcgggctgcgc
agcaacaagcttaaacttattcagctgggtgttttcacaggcctcagcaaccttacaagg
ctggatatcagtgagaataaaatagttatcctgctagattacatgttccaggatctctat
aatctacgctctctggaagtgggtgataacgaccttgtgtttatatcccacagagcattc
catggtctcaacagcctggaacacctgacattggaaaagtgcaacttgacctctgttccc
acagaggcctttactcatttgcacagcctcaacattttgtgtctgcgcaacctcaacatt
aacagcatcagagattattccttcaaacgcctctcccgtctcaaagttctggagatcgct
aattggccatacctagacacaatgactactaactgtttatatggtttgaatcttacatcg
ttaacaatcaccaatgcgaatttaacttcaatcccatatgtggcactccggcacctggtt
tacctgcgattcttaaatatgtcttacaatcccattgtaatcattgaggggaacaagctc
catgacctgcttagactgcaggagtttcacttggttggtggtagactggctataatagag
ccatactcatttagaggactcaactatctaaagatcctgaatgtgtcaggcaatgctcta
actacattggaagaatcagctttccactcagtggggaacttggagacactggtgctatat
ggcaaccctctggcatgtgactgtaggcttctctgggtattccgtcgcagatggaggctc
aactttaaccgccagcaacccacatgcgcctcacctgagtttgttcaaggaaaagaattc
aaagatttccctgacatattacagcctaattattttacatgtcgcaaatcaagaatccgg
gaccgcaaagcacagcagacgtatgtagatgagggaaccactgtgcattttgcatgccag
gcagatggcgatccggccccagttatcatgtggctttctccacaaaaacagttagttacc
ccaaaaactataggaagacttaccatgtttcctgatggtactttggaggtgcgctatgct
cagatccaagacaatgggacatatgtgtgtattgcaagtaatgcaggtggaaatgacact
gctgttgctcaccttcatgttcacagctactctcctgacttgctcaaccagtccaacaaa
acctttgcttttatttctaatcagcccactgacagcggagccaatgagacaaaagctact
gttcctttcccctttgatataaagactcttatcattgccaccaccatgggattcatctcc
ttccttggtgtggtattattctgtttggtactgctattcctgtggagccggggtaaaggt
aacactaaacacaacatcgagattgagtacgtaccacgtaaatcagatgcaggactaagc
agtggtaatgctgatgcacctcgtaaatttaatatgaaaatgatttaa |
|---|
