Neoarius graeffei (lesser salmon catfish): 132873395
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Entry
132873395 CDS
T10798
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ngra01100
Metabolic pathways
Module
ngra_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
132873395 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ngra01003
]
132873395 (csgalnact1a)
Enzymes [BR:
ngra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
132873395 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
132873395 (csgalnact1a)
Glycosyltransferases [BR:
ngra01003
]
Glycan extension
O-Glycan
132873395 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
DLP_helical
Csm1_N
NYD-SP28_assoc
Motif
Other DBs
NCBI-GeneID:
132873395
NCBI-ProteinID:
XP_060764895
LinkDB
All DBs
Position
25:complement(50449783..50533646)
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AA seq
549 aa
AA seq
DB search
MCIYDAGLFKMLRRGLFLWLSRICGILVLVCCFLSLLYVITCNPHTDDPLVASRLGAPGS
PRGPGVPGVLSGAPLGSSSHENYQALLQEREEQQRQHISSLKKQIAELKEALQERVERPK
ELQEKSGNAGTDLNEFLRAQMGRAEISAGVRLPNEYAVIPFESFTLQRVYQLETGLTRHP
EEKPARKDKRDEINEVVESAVHTLNSHKHNMGDKFSADKVYSMADFIEGLARTEKDKGTL
YELTFRGDRKNEFRRLVLFRPFGPLMKVSNERVATSHTIINIIVPLSQRADKFKQFMHTF
REVCIKQDGRVHLTVVYFGQDQMNEVKGILENTSRELNFRNFTMIHLNEEFSRGRGLDVG
ARAWKGGNVLLFFCDVDIVFTADFLNSCRLNTQPGKKVFYPILFSQYNPAVIYGGSDHIP
PVEQQLVIKKDTGFWRDFGFGMTCQYRSDFINIGGFDVDIKGWGGEDVHLYRKYLHSNLL
VIRAPSRGLFHLWHEKHCADELPPEQYKMCMQSKAMNEASHGQLGMLLFRHEIEAHLRRQ
KQRSAAKKA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatatatgatgctggtttgttcaagatgttgcgcagaggcttgtttttgtggctt
tctcgcatctgtggcattctagtcctcgtttgctgcttcctttctctcctctacgtcatc
acttgcaaccctcataccgatgaccccttggtggcatccaggctgggcgcaccaggctct
ccaagagggcctggggttcctggtgtactcagcggcgcccccttgggttcatcaagccac
gaaaactatcaagctctgcttcaggaacgtgaggaacagcaacggcaacacatttccagc
ctgaagaaacaaatcgcggaactgaaggaagccctgcaagagcgagtcgagaggccgaag
gagcttcaggaaaaatcgggcaacgcagggaccgatctgaacgagtttctccgcgcacaa
atgggccgggcagagataagtgcaggtgtccggttgccaaacgagtatgctgtgataccg
tttgagagcttcacactgcagcgtgtttatcagctggagacaggactgacacgtcatcct
gaggaaaaaccagcgaggaaagataaacgcgacgagattaacgaagtagtggaaagtgct
gtgcacacgctgaactcacacaaacacaatatgggagataaatttagtgcagacaaggtg
tacagcatggctgacttcattgaaggtttagcacgaacagagaaggataaaggaacactg
tatgagctgacgttccgtggagataggaagaacgagttcaggcgtctggttctgtttcgt
ccgtttggcccgttgatgaaggtgtcgaacgagcgtgtggcgacatctcacaccattatc
aacatcatcgtacctctttcacagagagccgacaaattcaaacaattcatgcacaccttc
agggaggtgtgtatcaagcaagatggacgagtacacctcactgttgtctacttcggccaa
gaccagatgaacgaagtcaaaggaatcctggagaacacatccagagagctaaacttccgt
aacttcacgatgatccacctgaacgaggagttttcccgaggccgaggtctggatgtgggt
gcccgagcctggaaaggaggaaacgttctgctgtttttctgtgacgtcgacatcgtcttt
actgctgactttctcaacagctgccgactgaacacacagccaggaaagaaagtgttttat
ccgattctgttcagccagtataatcccgcagtgatttatggaggcagcgatcacatcccg
cctgtggagcaacaactggtgattaagaaagacacaggcttctggcgggactttggtttc
gggatgacctgtcagtacagatccgacttcatcaacatcggtgggtttgatgtggatatt
aaagggtggggtggtgaggatgtgcacctctacaggaagtacctgcacagtaacctgctg
gtgatccgtgctccgtctcgcggtcttttccacctgtggcacgagaagcactgcgctgac
gagctcccacctgagcagtacaagatgtgcatgcagagcaaagccatgaacgaggcgtca
cacgggcagctgggaatgctgctcttccggcatgagatcgaggctcacctgcgcagacag
aagcagcgtagcgccgccaagaaagcctga
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