Neoarius graeffei (lesser salmon catfish): 132873410
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Entry
132873410 CDS
T10798
Symbol
cercam
Name
(RefSeq) probable inactive glycosyltransferase 25 family member 3 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00310
Lysine degradation
ngra00514
Other types of O-glycan biosynthesis
ngra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
132873410 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
132873410 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ngra01003
]
132873410 (cercam)
Enzymes [BR:
ngra01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
132873410 (cercam)
Glycosyltransferases [BR:
ngra01003
]
O-Glycan biosynthesis
O-linked Gal type
132873410 (cercam)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
132873410
NCBI-ProteinID:
XP_060764924
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Position
25:57416108..57434796
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AA seq
593 aa
AA seq
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MSLGVLVFSLFLMFPRTGSYFSEENYAEESEMQPPTVVMAIIARNAAHSLPYYLGALERL
NYPKERISIWAATDHNIDNTTAVLREWLTVMQQHYHYIEWRPMDKPTSYAGEMGPKHWSN
GRYEHIMRLKQAVLNFAKKRWADYILFADTDNILTNPDTLNLLMAENKSVIAPMLDSQSA
YSNYWCGITPQGYYRRTAEYFPTRNRYRKGCYPVPMVHSTMLLDLRKEATKNLAFYPPHA
DYSWPYDDIIVFAFSCRVSEVQMYVCNKERYGYLNIPAKPHQSVEDDRINFVHLCLEALI
DGPPMYLSRYVHVPPKQTDLMGFDEVYLINLRRRPDRRDRMLWSLYELEINAKVVDAVDG
AALNSSDIKILGVDLLPGYYDPFSGRTLTKGEVGCFLSHYYIWKEMVDMQLDTALIFEDD
VRFEGNFKRRLMRMMDEVEQAELDWDIIYLGRKQVNPGEEDPVETVKNLVVAGYSYWTLS
YAISLQGAQKLINAEPISKMLPVDEFLPIMYDKHPNEDYKSHFLNRNLQAFSASPLLVQP
CHYAGDAEWVSDTETSTLWDDDNVPTDWRGSYKSLKGGAPPAGIQNAAYRDEL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcggggttttggttttctctctgtttctgatgtttccgcggacaggaagttat
ttctcggaggagaattacgcggaggagtcggagatgcagccgcccaccgtggtgatggcc
atcatcgcccgcaacgcagcgcactctctgccttactacctcggagctctggagagactc
aactaccccaaagagcgcatctccatctgggcggcgacagaccacaacattgataacacc
actgcggtgctgagggagtggctcaccgtcatgcagcagcactatcactacatcgagtgg
cggcccatggacaagcccacgtcttacgcaggtgaaatggggcctaaacactggagtaac
ggccgctacgaacacatcatgaggctcaaacaggcagtgctgaatttcgccaagaaacgc
tgggctgattatatcctgtttgcagatacagataacatcctgaccaacccggacacgctg
aacctcctcatggctgagaataaatctgtaatcgcacccatgctggattctcagtcggcc
tactccaactactggtgtggcatcacgcctcagggttactatcgccgcacagccgagtac
ttcccgaccaggaaccggtaccggaaaggctgttaccctgttcccatggtccactccacc
atgctactggacctgcgcaaggaggccaccaagaacctggccttctacccaccgcacgcc
gattactcctggccctatgatgacatcatcgtctttgctttctcctgcagagtttcagag
gttcagatgtacgtgtgtaataaagagcgttacggatacctgaacattccggcgaagccg
catcagagcgtggaggacgaccgcattaacttcgtccatctctgcctcgaggctctgatc
gatggaccccccatgtatttgtcccgttatgttcacgttcctcccaagcagacggacctg
atgggctttgatgaggtttacctgataaacctgcgcaggcggcctgaccgcagagacagg
atgctgtggtctctctatgagctggagatcaacgctaaagtggtggatgctgtggacgga
gcagctctgaacagcagtgatattaagatcctgggcgtggaccttctgcctgggtattat
gacccattctctggccgcacgctcacaaaaggggaggtgggatgtttcctcagccactac
tacatctggaaggagatggtggacatgcagctggacacagctctgatctttgaggacgat
gttcggtttgagggcaacttcaaacggcgcctgatgaggatgatggacgaggtggagcaa
gccgagctcgactgggacatcatatacctgggcaggaagcaggtgaacccaggtgaggag
gaccctgtggaaaccgtgaagaacctggtggttgctggttattcgtactggacgctgtcc
tacgccatctcactgcagggagctcagaagctgatcaacgctgagccgatctccaaaatg
cttcctgtagatgagttcctgcccatcatgtacgacaaacatcctaacgaagactacaaa
tcccacttcctgaaccggaacctgcaggcgttctcagcaagccccctgctggtgcagcca
tgtcattacgcaggcgatgctgagtgggtgagcgacacggagacgtccacgctgtgggac
gatgataacgtccccacagactggaggggctcatacaagagtctgaagggcggagcgcca
ccggctggcattcagaacgccgcctacagggacgagctgtga
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