Neoarius graeffei (lesser salmon catfish): 132873417
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Entry
132873417 CDS
T10798
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra00562
Inositol phosphate metabolism
ngra01100
Metabolic pathways
ngra04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
132873417 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
132873417 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132873417 (synj1)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
132873417 (synj1)
Membrane trafficking [BR:
ngra04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
132873417 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
DUF7537
Motif
Other DBs
NCBI-GeneID:
132873417
NCBI-ProteinID:
XP_060764935
LinkDB
All DBs
Position
25:19884088..19969259
Genome browser
AA seq
1577 aa
AA seq
DB search
MAFSKGYRVYHKLDPPPYSVIVETRNREECLMFESGAVAVLSAAEKDAVKNTYTKMLDAY
GILGVLRLNLGDSMLHSLVLVTGCSSVGKVQESEVFRVTATDFISLKNDPSDEDRIADVR
KVLNSGSFYFAWSSTGVSMDLSLNAHRRIREDTSDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACVISRLSSERAGTRFNVRGTNDDGQVANFVETEQVIFLD
DKVSSFIQVRGSIPLFWEQPGIQGILSHLNQSRHSGTIRKDTKHRLVGSHRVKLSRGFEA
NAPAFERHFTALRRLYGKQLIINLLGMKEGEHMLSKAFQSHLKASEHANSVKMVNFDYHQ
MVKGGKTEKLLTVLKPQISRFLDDCGFFCYSAEIGIETCQSGTLRVNCLDCLDRTNSVQA
FFALEMLPKQLDALGLKEKPQLVARFQEVFRTMWSLNGDSVSKIYAGTGALDGKAKAGKL
KDGARSVTRTIQNNFFDSSKQEAIDILRLGSTLNSDLADKARALLTTSSLYASPRVLLGM
CQNHHKYTRPKKIRVCVGTWNVNGGKQFRSIAFRNQTLNDWLIDAPKKAGHPEFQDSRPQ
PADIFAIGFEEMVELNAGNIVSASTTNQKLWAAELQKSISRDNKYVLLASEQLVGVCLFI
FIRPQHAAFIRDVAVDTVKTGMGGATGNKGGVAIRMLFHTTSICFVCSHFAAGQSQVKER
NDDYNEITRKLSFPMGRLLYSHDYVFWCGDFNYRINLPNEEVKELIRQQNWDALIAGDQL
VEQRNAGQVFRGFIEGKLDFAPTYKYDLFSDDYDTSEKCRTPAWTDRVLWKRRKWDFQKT
AEELELNVVGALLDEEDQHLWNPGELKYYSRAELKTSDHRPVVAIIDVDILEVDPEARHQ
VYKDVIALQGPPDGTVLVSLCSSGPNDYFDDALIDELLDKFANFGDVILIRFVEEKMWVT
FLEGYSALAALSLSASTVMGKTIDIRLKSPGWIKSLEEEMSVERICGSIPTSASSTLLAE
DNDMGDEFDMEGDVDEEVENILPQHLQPGAGMDVGISPAPSPRSSPCPSPTHGEPAPPCR
PSRAPPRTAGPPQVIPLENQLVGASVSQGLEPKRPPPPRPNAPPARPAPPQRPPPPSGRG
QSTGAASSSRPNIPPRAGVISVPPQSRPPPPPAHPGAPRPIAEVHPGAPRSTTDNHPGAP
RPVPDAQNKPAELPLAPPPSLPGPMRPQMVSPMQPQATSPIRPPIQAQLPQPMVPTLPPP
MVPTLPPPMVPTMSAPLQPQPASTSTGAAMPPQPGLASPKPPPRSRSSHALPPEASPAPA
SQTNGTNGIRREAQLEMGPLDPLTIDLFSSTSWLNSQSLSRNSSLHSSFHSSTSSRSLNS
TPVPRFPQSNPQKTLDPTPALLAPPPPSRSRSQETLPVSSNPFLTDVQSKPNSINPFTGT
MAASQHRSLTPDFDTKPGLHRAASALVHSSTLPSSFSRPPQPALAPPPPKVQQWVTFDDE
SDFQRSGKAPASTATPLSSSATFQQPQSSFSISGFDSDGNWASLTTSTLPTLPPPVSGRT
NANATPRNPLLPEFTER
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagtaaaggatatcgtgtttatcacaaactggacccgccaccttacagtgtg
attgtagagacaagaaaccgtgaggaatgcttgatgtttgagtctggagctgtggctgtt
ctgtcggctgcagaaaaagatgccgtcaagaacacgtacaccaagatgctggatgcttac
ggcattcttggggttcttcgtcttaaccttggagactccatgctgcacagtttggtgtta
gtaaccgggtgcagctcggtagggaaagtgcaggaatcagaagtgttcagggtcacagcc
acagacttcatctctctgaagaacgatccgtcagatgaggacaggattgcagatgtgcga
aaagttctaaactctggcagcttctattttgcctggtcgtccaccggagtgagtatggac
ctgagtctgaatgcacaccgcaggatccgagaagacacttcagataaccgtttcttctgg
aatcaatccctgcatctgcacctaaagcattatggtgtaaactgtgatgactggctgttg
aggctgatgtgtggtggagtggagatccgcaccatctacgctggccacaagcaggccaaa
gcctgtgtcatttctcgcctcagctctgagagggcaggcacacgcttcaacgtgcgcggc
accaatgatgacggccaggtggccaactttgtggagaccgagcaggttattttccttgat
gacaaagtctcttctttcattcaagtccgtggatctataccgttgttctgggagcagcca
ggtatacagggaattttgtcacatctgaatcaaagccgccattcgggcacaatcaggaag
gacacaaaacacagactggttggttcccaccgtgtcaagctgtcccgcggttttgaggcc
aatgcaccggcttttgagaggcattttacagctctgaggaggctctatggtaaacagttg
atcattaacctgctgggtatgaaagagggggagcacatgctcagcaaagcattccagagt
cacctgaaagcctcagagcatgcaaattctgtgaaaatggtcaactttgactaccaccaa
atggttaagggagggaagacggagaaactcttgactgtactgaaaccacagatcagcagg
ttcctggacgactgtggcttcttctgttactctgctgagattggaattgaaacatgtcag
tctgggactctacgagtcaactgtctggactgcctggacaggacaaatagtgtccaagcc
ttctttgcacttgagatgttgcctaagcagctggatgccctgggtcttaaagagaagccc
caattggtggctcgctttcaggaggtcttccgcaccatgtggtcactcaatggagactcg
gtcagcaagatctatgctggcacaggtgctctagatggcaaggctaaggctggaaagctg
aaagacggcgcacgctcagtcaccaggaccatccagaacaacttctttgacagttcaaag
caagaagctattgatattctgaggctgggtagcactctaaacagtgaccttgctgataaa
gctagagctctcctcaccaccagcagtctgtatgcatctcccagagttttgctgggcatg
tgtcagaaccaccacaaatacactcggcctaaaaagatccgtgtctgtgtggggacatgg
aacgtcaatgggggcaagcagttccgtagcattgcgtttcggaatcagaccctcaacgac
tggttgatagatgcaccaaaaaaagcaggccaccccgaatttcaagacagcagaccccag
cctgcagacatctttgccattggctttgaggaaatggtggagctgaatgctggcaacatt
gtcagtgcaagcaccaccaatcagaagctgtgggcagcagagctgcagaagagcatctcg
cgggataataagtatgtgctgctggcctcagagcagctggtgggagtctgcctcttcatc
ttcattcggccccagcatgctgcgttcatcagagatgttgctgtagacacagtcaaaacc
ggaatgggtggcgccacagggaataaagggggtgtggctatccgcatgctcttccacacc
accagtatctgctttgtgtgctcacatttcgctgccggccagtcacaggtcaaggagcga
aacgatgactacaatgagatcactcgcaagctgtcattcccaatgggccgtctactctac
tcccatgattatgtgttctggtgtggggacttcaactatcgcatcaacctgccaaatgag
gaggtaaaagagctgatcaggcagcagaactgggatgctctgatcgctggggaccagctt
gtggagcagaggaatgcaggccaggtattcaggggctttattgaaggaaagttggacttt
gccccgacctacaaatatgaccttttttctgatgactatgacacaagtgagaaatgtcgc
acacctgcatggaccgaccgtgtgctctggaagagaagaaagtgggactttcagaaaact
gctgaggagttggagctgaatgtagtaggagcactactagatgaggaagatcagcatctg
tggaaccctggtgagctcaagtactacagcagagctgagctcaagacctcagatcacagg
ccagtggtggccatcatcgatgtggatattcttgaggtggatccagaagcgcggcatcag
gtgtacaaagacgtgattgccctgcaaggtccacctgatggcacagtcctcgtctctctg
tgcagttcagggccgaatgactacttcgatgatgctctgatagatgaactgctggataag
tttgctaactttggcgatgttattctgatcaggtttgtggaggaaaagatgtgggtgacg
tttttggaagggtactctgcactggctgccctttcactgagtgcctccactgtgatgggg
aaaaccatagacattcgtttaaagagccctggctggatcaagagtctggaagaagagatg
agtgtggagaggatctgtggcagcatccccacctccgccagctccacgctgctcgccgag
gacaacgacatgggagacgagtttgacatggagggcgatgtggatgaggaggtggagaat
attcttccccagcacctgcaacctggggctggtatggatgtgggtatttccccagcaccc
tctccccgctccagcccgtgcccctcaccaacacatggagagcctgcacccccctgcagg
ccaagcagagctccaccacgtacagccggacccccacaagttattcctttagaaaatcag
ctggtaggagcttctgtatcacaagggctggaaccaaaacgcccccctcccccacgaccc
aacgctccccctgccagacctgcacctccgcagcgccccccacctccatcaggacgaggc
cagtctactggagcagcaagcagttcaaggccgaacatccctcctcgggcgggtgttatc
agtgtgccaccacaatcaagaccaccaccacctcctgcccaccccggagctcccagaccc
atagcagaggttcacccaggagccccgcgatccaccacagataaccaccctggagccccg
agacccgttccagacgcacaaaacaaaccagcagaactccctctggcacctcctccctca
ctgcccggccccatgaggcctcagatggtctctccaatgcagcctcaggccacctccccc
attcgtccaccaatacaagcccagctgcctcaacccatggtacccacattgcccccaccc
atggtacctacgcttcctcctcctatggtgccaacaatgtcggcccctctgcagccgcag
ccagcttctacaagcaccggagcagccatgccacctcagcctggcctggcatcacccaaa
ccaccaccccgtagccgctcctcacacgccctgccaccagaggcttctcctgctcctgca
tctcagacaaatggaacgaatggaatccgaagagaagcacaattggaaatgggccccctt
gacccgctcaccatcgatctgttctcctccacttcctggctaaacagccaatccctgtct
aggaattcttcactccacagctccttccactcatccaccagttcacggtctctaaattcc
actccagttcctcggtttccccagtctaatccacagaagacccttgaccccacaccagct
ttgctggccccaccccctccttcccgcagccgctcacaggaaaccctcccagtctcctcg
aaccccttcttgactgatgttcaatctaaacccaacagtatcaacccatttactggcacc
atggcagcatcacagcatcgctcactcacgcctgacttcgacaccaagccgggcctccac
agagccgcatctgcccttgttcacagctcaactctgccttcatctttctccagaccacct
cagccagctttagctccgcctccacccaaagtccagcagtgggtgacctttgatgatgag
tcagactttcagaggtcaggaaaagctccagcatcaactgcaactccattgtcgtccagt
gctacattccagcagccccaaagcagcttctccatctctgggtttgactctgacggtaac
tgggcttcccttaccacatccacattgccaacactgcctcctcctgtgtcaggcagaact
aatgctaacgcaaccccaagaaaccccctcctccctgagttcacggaaagataa
DBGET
integrated database retrieval system
