Neoarius graeffei (lesser salmon catfish): 132873436
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Entry
132873436 CDS
T10798
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132873436
Cell adhesion molecules [BR:
ngra04515
]
Cadherins
Protocadherins
132873436
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Fibulin_C
Peptidase_S55
DUF1081
7TM_GPCR_Sri
RibLong
Cadherin_4
DUF294_C
Motif
Other DBs
NCBI-GeneID:
132873436
NCBI-ProteinID:
XP_060764987
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Position
25:3323553..3326058
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AA seq
818 aa
AA seq
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MVYLRSRVVSRYRRMTKTQLKWQAVFFIFCVYGMDFGFCQARYSIPEETPEGSFVGNIAN
DLGIEISRLISGKARVVTKGGRQYVELSRDKGTLVVKERIDREELCKQTTPCSFTFDLIM
ENPIELHRVTVEVQDINDNAPKFPKGTVNLQISENTASGKRFHLDNAVDLDVGVNSIESY
SLSQTNRFKLEMQNQADGQKYVEMILNHELDREERAELKLVLTAYDGGSPRKSGTMQIQI
SVLDVNDNAPVCKQSVYKAEVKENSPAGTVVTAVSATDADEGINGLVSYSIAQASVEARN
IFEINTETGEITITQGLDYENEKNYQINIKAMDKGGLEDTCKITIEVLDENDNSPSIQLM
SFSNFIAENSPTGTTVAVLNVEDADSGKNGLVQCKINKNLPFKIESSLSDYYALITDETL
DRENIAEYNITIVVSDQGSPARHNNKTINVKISDVNDNPPVFSSDEYKTFVFENNSPGVA
VLTVKASDADWGPNARLSYFLEENNIQGNPGSSLVSVNSDSGVVHAIKAFDFEQMKTFSF
NVTARDGGSPPLSSEVTVKIIVQDQNDNAPQVLYPVQTGGSVVAEIVPRSADVGYLVAKV
VAVDVDSGQNAWLSYKLQKATDRALFEVGAQNGEIRTVRQVTDKDAVKQKLTVVVEDNGQ
PSRSAVVNINIAVADSFPEVLSEFTDFTHAKEYNDDLTFYLVLALAAVSFLFITTVVVII
SVKIYRWRQSRIFYQSNLPVIPYYPPGYADTGVTGTLPHGYHYDACMTTDSRKSDCKYST
LGGQSVLVMDPSFTETMQHAMRAKEFQQDPESPEVVRK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggtttatttgcgatcgcgtgttgtttctcggtatcgtcggatgacaaaaacgcagtta
aaatggcaggctgtgttctttattttctgtgtttacgggatggacttcggcttttgtcaa
gcgcgatattccataccggaggagactccagagggatcatttgtaggcaacatcgccaac
gatttgggaatagagatcagcagacttatttctggaaaagctcgggttgtaacaaagggc
ggccggcaatatgtcgaactgagcagagacaaaggcaccctcgtagtgaaggagaggata
gaccgagaggagctctgcaagcaaacaacgccctgcagcttcacctttgatctgatcatg
gaaaaccccatcgaactgcatcgtgtcactgtggaggttcaagatatcaatgacaatgcg
ccaaaatttcctaaaggtaccgtcaatttacaaattagtgagaacacagcatctgggaaa
cgctttcatttagacaacgcggtcgatttggatgtcggtgtaaatagtattgaaagctat
tctcttagtcagaccaaccgattcaagcttgaaatgcaaaatcaggccgatgggcaaaaa
tatgtcgaaatgattttaaaccatgagctcgaccgagaagaacgtgctgagctaaaatta
gttctgactgcatatgacggaggatcaccaagaaagtcaggcacaatgcaaattcaaatt
tctgtattagatgtgaatgataatgccccggtgtgcaaacaatcagtttataaagcggaa
gtgaaggaaaattctccagctgggaccgtcgtgactgcagtaagcgccactgatgctgac
gaaggaataaacggtctagtctcgtattctattgcacaggccagtgtagaagccagaaat
atttttgagataaacacagaaacaggagagattacaatcacacaaggcttagactatgag
aatgaaaagaattatcaaataaatatcaaggcaatggacaaaggggggctggaagatacg
tgtaaaattactattgaagttcttgatgaaaatgataattccccctccatacagctaatg
tcattttcaaactttattgcagaaaattctccaaccggaacaactgtggctgttcttaat
gtagaagacgcagattccggtaaaaatgggctcgtgcagtgtaaaataaacaaaaacttg
ccgtttaaaatagaatcctcgctttctgattactatgcattaattactgatgaaacgctt
gatcgagaaaatattgctgaatacaacataaccatagtggtgtctgatcagggaagtcct
gctcgacacaataacaaaacgatcaatgtgaagatttccgatgtgaatgataacccaccc
gtattcagttctgatgagtataaaacatttgtttttgaaaacaactctccgggtgtggct
gtgctgacagtcaaagcgagcgatgctgactggggtccaaacgcgcgactctcttatttt
ttggaggagaataatatccagggcaacccagggagttctttagtctcagtgaactcagac
agcggggttgtacatgcgatcaaagcctttgattttgagcaaatgaaaacgttcagcttt
aatgtgacagcccgagatggagggtcgccccctttaagttctgaagttacagtgaagatc
atcgttcaagatcagaatgacaacgctcctcaggttctctacccagtacagactggaggc
tctgtggtggctgagatcgtgcctcgttcagcagatgtcggctatctggtcgctaaagtg
gtagctgttgatgtggactctggacagaacgcctggctctcttacaaactccagaaagcc
acagacagggcgctgtttgaagtgggagcgcagaacggagagatacggactgtgcgccag
gtcactgataaagatgcagtgaaacaaaagctgactgtagttgtggaggataacggacag
ccatctcgctcagctgtagtcaacatcaatatagctgtagcggactctttccctgaagtg
ctctcagaattcaccgactttacgcacgccaaagaatataacgatgacctcaccttttat
ttagttttagcattagctgctgtctctttccttttcatcacaactgtagtagttataata
tcagtaaagatctacaggtggagacaatcgcgcatcttctatcagtccaatctcccagtt
attccgtactatccacccggttacgcagacacaggagttactggaactctgccgcacggg
tatcattatgatgcttgtatgacgactgactcgaggaagagtgactgtaaatattctaca
cttggaggacaaagtgttttagtgatggacccgagttttacagagactatgcagcacgcg
atgagagcaaaagaattccagcaagacccagagtcaccggaagtggtaaggaaataa
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