Neoarius graeffei (lesser salmon catfish): 132873454
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Entry
132873454 CDS
T10798
Symbol
ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ngra03041
]
132873454 (ppwd1)
03110 Chaperones and folding catalysts [BR:
ngra03110
]
132873454 (ppwd1)
Enzymes [BR:
ngra01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
132873454 (ppwd1)
Spliceosome [BR:
ngra03041
]
Complex C
Other components
PPlases
132873454 (ppwd1)
Chaperones and folding catalysts [BR:
ngra03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
132873454 (ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_TEP1_2nd
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_2nd
WD40_Gbeta
PEP5_VPS11_N
Beta-prop_Vps41
VPS11_N
Motif
Other DBs
NCBI-GeneID:
132873454
NCBI-ProteinID:
XP_060765024
LinkDB
All DBs
Position
25:complement(58177434..58195558)
Genome browser
AA seq
629 aa
AA seq
DB search
MASRAESERLENKRKVKEGEGEEEEEEEEESWVGPLPAEAAPVKKRKVLEYERVYLDNLP
SAAMYERSYMHRDVITFIICTKTDFIITASQDGHVKFWKKKEDEGIEFVKHFRSHLSVIE
CISVSAEGALLCTVGDDQAMKVFDVVNFDMINMLKLGFHPGQCEWIYNPGDAINTVACSE
KSTGRIRVYDGRGSNQPLHTFDKMHSSPLCQIRLNPRYRVIVSADRAGMLEYWTGLPTEF
KFPRQVEWEYKTDTDLYEFAKCKTFPTSLAFSHDGKKMATIAADRKVRIFRFLTGKLMRV
FDESLTMFTELQQMRQQLPDMEFGRRMAVERELEKVDGVRLTNIIFDETGHFVLYGTMLG
IKVINVETNRCVRILGKQENIRVVQLTLFQGVAKSMKAAPTVEMKASDNPALQSNDPDPT
VFCTAFKKNRFYMFTKREPEDTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIIH
TTMGDIHLKLYPVECPKTVENFCVHSRNGYYNGHLFHRVIKGFMIQTGDPTGTGMGGESI
WGGEFEDEFHFSLRHDRPYTLSMANAGPGTNGSQFFLTVVPTPWLDNKHTVFGRTTKGME
VVQRISNVKVNPKTDKPYEDVSIINITIK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcgcgcggagagtgagcgtttggagaataagcgcaaggtgaaggagggagag
ggagaggaggaggaggaggaggaggaggagagctgggtcgggccgctgcctgctgaagct
gctccggtgaagaagaggaaagtgctggagtatgagagagtttatctggataatcttcct
tctgctgccatgtatgagcgaagctacatgcaccgagacgtgatcaccttcatcatctgc
accaaaacagatttcatcatcacggcaagtcaggatggtcatgtgaagttctggaagaag
aaagaagatgaaggaattgagtttgtgaaacacttccgcagccacctgagtgtgattgag
tgtatttcagtcagtgctgagggagcgctcctctgcaccgttggagatgatcaggccatg
aaagttttcgacgttgtgaactttgacatgatcaacatgctgaagctgggattccacccc
ggtcagtgcgagtggatctataaccccggtgatgccatcaacactgtggcctgctccgag
aaatccacagggaggatccgcgtgtacgacggacgaggcagcaaccagccgctgcacacg
tttgataagatgcactcgtctcctctgtgtcagatccggctgaacccgcggtaccgcgtc
atcgtgtcggccgacagagccggaatgctggagtactggaccggccttccgacggagttt
aaattccccaggcaggtggagtgggagtataaaaccgacacggacctgtacgagttcgcc
aagtgtaaaacctttcccaccagcctggcgttctcacacgacgggaagaagatggccacc
atcgccgccgaccgcaaagtccggatcttccggttcctgacagggaaactcatgagggtg
ttcgacgaatcgctaacaatgttcacagagctgcagcagatgaggcagcagctgccggac
atggagtttggccgcaggatggcggtggagagagagctggagaaagtggacggcgttcga
ctgactaacatcatctttgacgagacgggacactttgttctgtacggaaccatgctgggc
atcaaggtcatcaacgtggagaccaaccggtgtgtgaggattttggggaaacaggagaac
atccgtgtggtgcagctcactctcttccagggcgtggctaagagcatgaaggcggctccc
accgttgagatgaaggcgtctgataaccctgccctccagagcaatgaccctgaccccacc
gtcttctgtaccgccttcaagaagaaccgcttctacatgttcacaaagcgagagccagag
gacaccaagagcgccgactcggacagagatgtcttcaacgagaagccgtctaaagaggag
gtgatggcggccacgcaggcagaaggtccgaagagggtctcggacagcgccatcatccac
accactatgggagacatccatctgaagctctatcctgtggagtgccccaaaactgtggag
aacttctgtgtccacagcaggaacggctactacaacggacacctatttcatcgtgtcatt
aagggtttcatgatccagaccggagaccccacaggcacagggatgggcggagagagcatc
tggggcggagagttcgaggacgagttccacttcagtctgagacatgaccggccgtacaca
ctcagcatggccaacgctggaccaggaaccaacggctcacagttcttcctcacggtggtg
cccacgccgtggctggacaacaagcacaccgtgtttggacgaactacaaaagggatggag
gtggtgcagaggatctccaatgtcaaggtcaacccaaagacggacaaaccgtacgaggac
gtcagcatcatcaacattaccatcaagtag
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