Neoarius graeffei (lesser salmon catfish): 132873508
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Entry
132873508 CDS
T10798
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132873508 (sbno1)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132873508 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
132873508
NCBI-ProteinID:
XP_060765141
LinkDB
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Position
25:11541888..11557961
Genome browser
AA seq
1424 aa
AA seq
DB search
MADIEHFVVDCDAVSLKMMDPGQDLLLAALSESGICPNDLFDIDSQDTVQSPASQQSVSK
NVLDIGLGSEAAGIVGIEPAVPPTPTVTIRQKPQPSTTTFVLNQLNQLPSLGTIVVTKPS
MGTSSRQTITVTKVVQTPSSAQRSSSSSSTTATMCSVAPPNREQVKLKDLLRTSSVKTNS
LGELMKLKPPPDIAQPVATATGTKIILLSTKLMNKPVEVNNGVKKEVSSKDVARIWANEE
IKMRSFSPVNLPGMKEEEEPEEEEEEELGHAETYAEYMPMKLKIGERHPDPVVETSSLSS
VNPPNVWYRLSVPEETIDRGWLSALQLEAITYACQQHETFLPNGDRAAYLIGDGAGVGKG
RTIAGIIYENYLLGRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKH
NGSVKKGVIFATYSSLIGESQTGGKYKTRFKQLLHWCGDDFDGVIIFDECHKAKNVCPIG
SSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFSNFIQ
AVERRGVGAMEIVAMDMKLRGMYIARQLSFQGVTFKIEEVPLTQNYIKMYNKSVRLWVSA
REKFQQAANLMDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVV
IGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLVEKHFPAPDRQKLFSLLGIDLSAK
KTPSPAETKEEQKGKKRKGAEVKKGAKKSRKSGGLSGSSSDESNSEDSDKDEDTDDSFDS
VSSGDDDEDDFNPFKDDSSEDEEDDPWLIRKDSKKSKEKKNKKKKKTIDPDSIQSALLAS
GLGSTRPAFTTPIVKSTSNNTVAPAKSEPEESSCVTSNDAVEDAQQMKRELLEQLEKLAE
DLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQR
FMDGEKNIAIISEAASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQV
TAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALE
IVMKSIVNLDAPLVSPPSYFEGDFFKEIRNGLIGVGLINVEDRSGVLSLDKDYNNIGKFL
NRILGMEVQQQNALFQYFSDTLNAVVQNAKKNGRYDMGILDLGSGDEKVKKMDAKKFLTP
GYSTSGHVELYTVSVERGMSWEDATHIWAEQSGPDDGFYVQVRNNKKIAIMVKEVNTKKR
LFMVYRPNTGKQLKLETYADIRKRCKKVLSDEAKQCWIDQYKSSADVCSHAYWRGNCKKV
SVGLQCEIGLRCRTYFVLCGSVLSVWTKVEGVLASVSGSNMKMQIVRLRTEDGQRIVGLI
IPANCVAPLTNILSSSDQSQQLAVQQQQMWQQLHPQSLSHSFNT
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggcagatattgaacacttcgtggttgattgcgatgcggtttcacttaagatgatggat
ccaggacaagacttgctccttgcagctcttagcgaaagtggaatctgtccaaatgacctt
tttgacattgattctcaggacactgttcagtcccctgcctctcaacagtcagtttccaag
aatgtccttgacattggtcttggtagtgaagcagctggaattgttggaattgaacccgct
gtgccacccacacctacagtcacaatacgacagaagcctcagccctcaaccaccacgttt
gtcttaaatcaactgaatcaactgccatcattgggaaccattgtggtcacaaagccctca
atggggacctcctccagacagactatcacagtaaccaaggtggtgcagacgccatcgtca
gctcaacgaagctcgtcctcatcctccactactgccaccatgtgcagtgtggccccaccg
aatcgagagcaggttaagctgaaggacctgctccggaccagcagtgtgaagacgaacagc
cttggtgaacttatgaagctgaagcctccacctgatattgctcagcctgttgctacagct
acaggaaccaagattattttgctctccacaaagttgatgaataagccagtggaggtaaac
aatggtgtgaagaaggaggtgtcgagcaaagatgtcgctagaatctgggccaatgaagaa
atcaaaatgcgaagcttttcacctgtgaatttacctggaatgaaggaggaggaggagcca
gaggaggaagaggaggaggagttgggacacgcagaaacatatgctgaatacatgccaatg
aaattgaaaataggagagcgacatcctgatcctgtggtagagaccagttccctctcaagt
gtcaacccacctaatgtgtggtacaggctttccgttccagaggagacgatcgacagaggc
tggctatctgctcttcagcttgaagccattacatatgcttgtcagcaacatgagacattc
cttccaaatggagacagagcagcttacctgatcggtgatggtgctggtgttggaaaggga
agaactattgctggaatcatatatgaaaactaccttctgggcaggaaaagatctctctgg
tttagtgtatcgaacgacttgaagtatgatgcagaaagggacttgagagatattggtgca
aagaacatccaggtccattctttaaacaagttcaaatatggaaaaatctcctcaaaacac
aatggaagtgtgaaaaaaggtgtgatctttgctacatactcatccctgattggagaaagc
caaacaggtggaaagtataagacaagattcaaacaattactccattggtgtggggatgat
tttgatggtgtgataatctttgatgaatgtcacaaagccaaaaatgtttgcccaattggg
tcatcaaagcctacaaagactggactggctgttctcgagctgcagaacaaactgccaaaa
gcacgtgttgtctatgccagtgctacaggagcctctgagcctcggaacatggcttacatg
aatcgtcttgggatctggggggaaggaacgcctttcaaagaattttctaattttattcaa
gctgttgaaaggagaggtgttggtgccatggagattgttgccatggatatgaaattgaga
ggaatgtacattgctcgacagctgagctttcagggtgtgacatttaagattgaagaagtc
cctctgacacaaaactacatcaaaatgtataacaagtcagtccgtctgtgggtgagcgcg
cgggagaaattccaacaagcagctaatttgatggatgccgaacagcgcatgaaaaagtca
atgtggggacagttctggtctgcacatcagagattctttaagtacctgtgtatcgcctca
aaggtgcgccgagtggtgcagcttgcccgagaggaagttaagaatggaaagtgtgtggtc
attggcctgcagtcaacgggtgaagctcgaacccttgaggctttggaggaaggtggaggc
gagctcaatgactttgtctctactgcaaagggtgtcctgcagtccctggtagagaagcac
ttccctgccccagacagacagaagctcttcagcttgctgggtattgatctgtctgcaaag
aaaacaccttcaccagcagaaactaaggaggagcagaagggcaagaagaggaaaggtgca
gaagttaaaaaaggagcaaagaaatcccgtaaatctggagggctttcaggcagcagttca
gatgagagcaattccgaagactccgacaaagacgaggacactgatgacagctttgactca
gtcagctcaggagatgatgacgaagatgacttcaaccccttcaaggacgattccagtgaa
gatgaagaagacgatccttggctaatccgtaaagactctaaaaagagtaaggaaaagaag
aacaagaagaagaaaaagaccatagatccagattccattcaaagtgccttgttagcctct
gggcttggttcgactagacctgctttcacaacacctattgtaaaatctacgtccaacaac
actgttgctcctgctaaaagtgagcctgaagaaagtagctgtgtgaccagtaatgatgcc
gtggaggatgcccagcagatgaaaagggagctgctggagcagctagagaaactggctgag
gatctgccaccaaacacactggatgagcttattgatgagttgggagggcctgaaaatgtg
gcagagatgaccggacgcaaaggaagagtagtcagcaatgacgatggcagcatctcgtac
gaatcaagatcagaactggatgttcctgtagaaattctgaaccttacagagaaacagagg
ttcatggatggagagaagaacattgctataatttctgaggcggccagctctggtatttca
cttcaagcagaccgtagagtgaagaaccagaggagaagggtgcacatgactttagagctg
ccatggagtgcagaccgggctattcagcagttcggtagaacacaccggtctaaccaggtc
actgctcccgagtatgtattcctgatatctgaacttgccggagaacaaagatttgcctcc
attgttgccaaaagactagagagcttgggagctctcacgcatggagaccgaagagccaca
gagacgagggacctcagtcgattcaactttgacaacaaatatggcagaaatgcacttgag
attgttatgaagtccattgtcaatttggatgctcctttggtctctccaccgtcttatttc
gaaggggatttctttaaagaaattcgcaatggtttgattggtgtggggctgattaatgtg
gaagataggtctggtgttctctcactggataaggactacaacaacattggaaaattctta
aaccggatcctcggcatggaggtccagcagcagaacgccctcttccagtatttctctgac
actttgaatgctgttgttcaaaatgctaaaaagaatggcagatatgacatgggaattctg
gatttgggctctggggatgagaaggttaaaaagatggatgcgaaaaagttcttgacacca
ggttactccacatcgggccatgttgaactttatacagttagtgtggagaggggtatgtca
tgggaggacgctacccatatctgggcagaacagagcggaccagacgacggcttctacgtg
caggtacggaataacaagaaaatagccataatggtcaaggaagtcaacaccaaaaagagg
ctcttcatggtgtacagaccaaatacaggaaaacagctcaaactggagacatacgcagat
ataagaaagcgatgcaaaaaggttctttcagacgaggcaaagcagtgctggattgatcag
tacaagtcttcagcggatgtttgctcgcatgcctattggcgtgggaactgtaagaaggta
tcggtggggctgcagtgtgagatagggttgcgttgccggacatactttgtcctatgtggc
tctgtcctcagcgtgtggaccaaagttgagggtgtcttggcctctgtcagcggaagcaac
atgaagatgcagattgtccgtttaagaactgaggatggacaacgtatagtaggtctgatc
attccagcaaactgcgtggctcccctcaccaacatcctatcctcgtcagaccaatcgcag
cagctggctgtacaacagcagcagatgtggcagcagctgcatccacagagcctcagccac
tcgttcaatacatag
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