KEGG   Neoarius graeffei (lesser salmon catfish): 132873511
Entry
132873511         CDS       T10798                                 
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ngra  Neoarius graeffei (lesser salmon catfish)
Brite
Transcription machinery [BR:ngra03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     132873511 (chd1)
Chromosome and associated proteins [BR:ngra03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     132873511 (chd1)
    SLIK complex
     132873511 (chd1)
SSDB
Other DBs
NCBI-GeneID: 132873511
NCBI-ProteinID: XP_060765149
LinkDB
Position
25:complement(40442238..40485969)
AA seq 1816 aa
MDGRSEDESVSNSSGESSNSDDGSGSGSGSGSGSSSSSSSSSSSQSGSSDSGSGSDSGSQ
SDSDSEKSKGKNGQNNSAKIDSTEFWKSNPSILAVQRSALLRKQQQQQQQSSSNSDSDEE
SSSSDDSDDDSSRKRKSKGSGSDSDSASGSDSDSGSGSDSSNSSGEEEVENSEESVSDYE
PSHKVKSRKPPNKANARNGKKSKASKKKPSTSSSDEDDDYKKALAGPRRQATVNISYKEA
EELKTDSDDLVEVCGEDVPPPEEDEFETLERVMCVRIGLKGATGATTTVYAVEADGDPNA
NFNPNKQPGDVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNFKKKDQEKKKWLKA
ASPEDVEYFNCQQELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWED
GALIARKFQKYIDAYMSRNQSKTIPSKDCKFLKLRPRFVPMKKQPHYIGGEGLELRDYQL
HGLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQ
REIHLWAPQMNVVVYLGDISSRNMIRTHEWMHAHNKRLKLNILLTTYEILLKDKSFLGNV
SWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFH
SWERFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYY
KWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNDFHNRTEALQHLIRS
SGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILADYLRSRQFLFQRLDGSIKGEMRKQA
LDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQ
VNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSSTPFNKEEL
SAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFS
MMEEEDMDMDTSGNQKTWDTIIPEEQRRRLEEEERQKELAEIYMLPRMRNCAKQISFNGN
EGRRSRNRRYSGSDSDSASDRKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPL
ERLDAIARDAELVDKSEHDLRRLAETVHNGCVRTLRENPCGPEKASGGRRGKVKGPTFRI
SGVQVNAKLVISHEEELAPLHKAIPADPEERKRYMLPCHAKAAHFDIEWGKEDDSSLLIG
IYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQR
QMGMANFRKRKPRGKKNKTVKPKVDEVVNSLSSAPPSEKSSEDEEDKEDEKDSPPTKPPP
NRRGRALDRVVKEEEEDDDDDDEEEEEEEEEEDEEEEPEPEHHVKEPEEKEIKDREIKKD
VKREKKEEGRDNKDKKEPKEKKESKPVEHKMEESFTEKTPEIKAEIRDKSKKADVHITAG
ENVPVSEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDH
ITDCLKEYTNLEHIKQWRRNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQTADQNTST
VNTQAFRHTDIERLKESQQDESSRDSYSSDRHHSSSRSHEQSKERHSSDSYRKSSDSRKR
PYSSFSNGKDHRERDHYRERQDSRYYSDSKHRKLDDHRSSRDSWSDSNNKERVHSEQRSH
SEHRSSSDYSHHKASRDYRYHSDWQLEQRASGSGPRSPRDQRSPYDSRSPMGHRSPFEYS
SEHKTTPEQVWSSRKT
NT seq 5451 nt   +upstreamnt  +downstreamnt
atggatggccgcagtgaagatgaaagtgtgagcaacagtagcggagaatccagtaactcg
gatgatgggtctggatctggatctggttccggttccggttctagctccagcagtagcagc
tccagtagcagccagtcagggagtagcgactcaggaagtggctcagactcgggcagccag
tccgattctgactctgaaaagtccaaggggaagaatggtcagaataactctgccaagatt
gattccacagaattctggaagtctaatcccagtatcctggcagtgcagaggtcagctctg
ctcaggaaacagcagcaacaacagcaacagagctcctcaaacagtgactcggatgaggaa
tcctctagtagtgatgactcagatgatgactcttcgaggaagcgaaagagtaaagggtct
ggatctgactcggactctgcgtctggatctgactcggactctggttcagggagtgactcg
tctaattcttcaggcgaagaagaggtggagaacagtgaagagtccgtttcagactatgaa
cctagccacaaagttaaaagcaggaagccacctaacaaggctaatgccagaaatggaaaa
aagagcaaggcttcaaaaaagaagccctcaacttcttcgtcagacgaggatgatgactat
aaaaaggctctggctggtcctcggaggcaggctacagtgaacatcagctataaggaggct
gaagaactgaaaacggactctgacgatttggtggaggtgtgtggggaggacgtcccaccg
cctgaggaagatgagtttgagactctggaaagagtcatgtgcgtaagaataggattaaaa
ggagctactggggcgaccaccacagtctatgctgttgaggctgacggagaccctaatgcg
aacttcaacccaaacaagcagccaggagacgtgcagtacttgatcaaatggaaaggctgg
tcacatattcacaacacttgggagacggaggagacactgaagcagcagaacgtgaagggc
atgaagaaactggataatttcaaaaaaaaggatcaggaaaagaaaaagtggctcaaagca
gcttcacctgaagatgtggaatacttcaactgccagcaggagctcatggatgacctgcat
tcacaatatcagcttgtggagaggattattggccattcaaatcagaagtcggcagcaggc
tacccagactacttatgcaaatggcaagggcttccatattcagaatgcagctgggaagat
ggggcacttattgctcgaaagttccagaagtacatagatgcctacatgagccggaaccag
tccaaaacgatcccctccaaggactgcaagtttttaaagctgaggccgcggtttgtgcct
atgaagaaacagcctcattatatcggcggggaagggcttgagcttcgagactaccagctg
cacggcttaaactggatggcccattcgtggtgcaaagggaacagttgtattctggcagat
gagatgggccttggaaagaccattcagaccatctcctttctgaactatctgttccatgag
catcagctctatggaccattcctgttggtggtacccttgtctacactcacttcctggcag
agggaaatccatctctgggccccgcagatgaatgtggtcgtctacctgggtgacatcagc
agtaggaacatgatcagaacacatgagtggatgcatgcccacaacaagcggctaaagctg
aacatcctcctcacaacgtacgaaatcctcttgaaagataagtcgtttctggggaacgtg
agctgggcgttcattggtgtggacgaggcccacaggttgaagaatgatgattcccttttg
tataagaccatgattgatttcaagtccaaccaccggctccttatcacaggaacacctttg
cagaattccctcaaagagctgtggtcgctcctccacttcatcatgccagagaagtttcac
tcatgggaacggtttgaggaagaacatggtaaaggcagggactcgggctacactagcttg
cataaggagctggagccttttctcctacgaagggtcaagaaggatgtggagaagtcacta
cctgccaaggtggaacagatccttagggtggagatgagtgccatccagaaacaatactac
aagtggatcttgacgagaaactacaaggcacttagcaaaggcacaaaaggaagcacgtct
ggtttcctcaacattatgatggagctgaagaagtgctgtaaccactgctacctcatcaaa
cctccagaggacaatgacttccacaacagaaccgaggccttgcagcacctaatccgcagt
agcgggaagctggtacttctggacaagctcctggtgcgactgaaggagcgtggccaccgt
gtgctcattttctcacagatggtcaggatgctggacatccttgcagattatctgaggagt
cggcagttcttattccagaggttggatggttccatcaagggcgagatgaggaagcaggca
ttagatcattttaatgcagaaggttctgaggacttctgtttcctgttgtccacacgagca
ggtggcctgggcattaacttggcttctgcagatacggtcgtcatctttgactcagactgg
aacccccaaaatgacctgcaggcacaggccagagctcacaggatcgggcagaagagacag
gtaaatatttatcgtttggtgactaaggggtctgtggaagaagacattattgagcgagcc
aaaaagaagatggtgctggaccaccttgttattcagaggatggacactacagggaaaaca
gtccttcatactggtgctgctccttccagcagttccacccctttcaacaaagaggaactg
tctgctattttgaagtttggtgctgaagaactttttaaggagccagagggagaagaacaa
gagccccaggagatggatattgatgagattctgaagagagcagagaccagggaaaatgat
cccggtccatctactgtaggagaagagctcctctcgcagttcaaggtggcgaatttctcc
atgatggaggaagaagatatggacatggacacaagcggcaaccagaagacctgggataca
atcatccctgaagagcagcggagaagactggaggaagaggagagacaaaaggagctagca
gagatctacatgctgcctcgcatgaggaactgtgccaagcagataagctttaatggtaac
gagggcaggcggagccggaacagaaggtattctgggtctgacagtgactctgcctcagac
cgaaagaggcccaagaagcgaggcagaccacgaactattcctcgagagaacatcaagggc
ttcagtgatgctgaaatacgaaggtttatcaagagttacaagaaatttggtggccctttg
gaaaggctggatgctattgcccgggatgctgagctggtggataaatctgagcatgatctg
aggcggctagcagagacggtacataacggttgtgtgagaaccctgagggaaaatccatgt
ggaccagaaaaagcctcaggaggcaggagagggaaggtgaagggacctaccttcaggatc
tcaggtgttcaggtcaatgctaagctagtaatctcacatgaggaggaactggcccctttg
cacaaagccattcctgctgacccggaggagaggaagaggtatatgcttccctgccatgca
aaggcagctcattttgacatcgagtggggcaaagaagacgactccagccttcttattggg
atttatgagtatggctatgggagctgggaaatgattaagatggacccagaccttaacctt
acccacaagcttttaccagacgaccctgataagaaaccacaggctaaacagctccagaca
cgagccgactacctcatcaaattactcagcaaggacctcgccaaaaaggaggcccagagg
caaatgggcatggctaatttccgaaagaggaagccacggggaaagaagaataaaactgtg
aaaccaaaagtggatgaagtggtcaacagtctgtcctctgctcctccttccgagaaaagc
tcagaagatgaggaagacaaggaagatgaaaaggactctccacctaccaagccaccaccc
aacaggagggggcgagctttggaccgtgtggtaaaggaagaagaagaagacgacgacgac
gatgatgaagaggaggaagaggaagaagaagaggaggacgaggaggaggaaccagagcca
gaacaccacgtcaaagagccagaggagaaggagataaaagacagggagataaagaaagat
gtcaaacgggagaagaaagaggaaggtcgggacaacaaagacaaaaaggaacccaaagag
aaaaaggaaagcaagcctgtggagcataaaatggaggagtctttcacagagaagactcca
gagataaaagctgaaattcgtgacaaaagcaaaaaggcagatgtccatatcactgctgga
gagaatgttccagtctctgaggaatctgaagagcttgaccagaagaccttcagcgtgtgt
aaggaacgcatgcggccagtgaaggcagccttaaaacagctggatcgtcctgagaaaggt
ctttctgaacgagagcagctagagcatacaaggcagtgcctaatcaaaattggagaccac
atcacagactgtctaaaagaatacaccaacctcgaacacatcaagcagtggaggagaaat
ctttggatatttgtttccaaatttacggagtttgatgcaagaaaactgcataaactgtat
aagcatgcaatcaagaaaagacaggaaaacgctcagacggcggaccaaaacactagcact
gtaaatacacaagcctttagacacacagacattgagcggttaaaggaatctcagcaggac
gaaagcagtagagacagctacagttcagacagacaccactcgagctcgcgtagccacgag
cagagcaaagagcgccattccagcgattcgtataggaaaagctcggactccaggaagaga
ccatattcctccttcagcaatggcaaagaccaccgagagcgagaccactacagagagcgt
caggacagccgatactacagcgacagcaagcataggaagctagatgatcaccgttctagt
cgagacagctggtcagacagcaacaataaggagcgtgtacactcagagcagcgttctcac
tcggagcatcgctccagctcagactacagccaccacaaggcctctcgtgactaccgctat
cactcagactggcaattggagcagcgtgcgtcaggtagcggaccacgttctcctcgagac
cagagatcgccctacgactcccggtcgcctatgggccaccggtcgccttttgagtactct
tccgagcacaagaccacacctgaacaggtctggagcagtcgtaagacatag

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