Neoarius graeffei (lesser salmon catfish): 132873573
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Entry
132873573 CDS
T10798
Symbol
frem2a
Name
(RefSeq) FRAS1-related extracellular matrix protein 2a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04512
ECM-receptor interaction
Brite
Lectins [BR:
ngra04091
]
C-Type lectins
Lecticans
132873573 (frem2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132873573
NCBI-ProteinID:
XP_060765251
LinkDB
All DBs
Position
25:18873115..19112563
Genome browser
AA seq
3106 aa
AA seq
DB search
MMELYLWFILLCTVAGRCSGRHASGHGLSYAHRSELSEDSILVANNRIRVLFGRSVFIDP
INDLVIEVQPGDRCSLIVLDNDLLSQRPGHLSPKKFPCEFGPNDVKYSHLGSRSPAGDRV
RLQLRYDTQTETIIIPFMLEIEILFTQLEIVVKNMPLTVDQLNGISNSIDRRILEFIYDR
NSEQCEVTSLASCNALPRYGELPDKNKLEKMMDCDAFLRADIRYKHTSIHKSPNRDYIPM
VVELRNKENNLLKQEFFHIMVRIQEGRRNSPPKPSFMAMMMMEIDQFVMTALTSDMLAAE
DMESDPDDLIFNITTPFSFEEGYIVSTDDRNLPITSFYQRDIKELKIAYKPPSMDLDTER
IVQIDFEVLDADGGVSETFAFMIVIKPMNTLAPVVTKNTGQLLYEGQSRPLFTQNNLEIS
DEDNLDSVRITVVDGLRHGDLTVLGSSSKYFTPADLQIGIVVYQHDGSDTYSDNIIFRMT
DGKNEVEFLFPITIVPTDDEPPIVNANTGLVVFKNQMIPISPLMLSAADIDSEDSTIKFT
IEPPLSTIGEVLLRQSEAPEDPSSWKFNKENGLCEKAVTEWLQKDITDGKLFYRHTGPHI
TETVTDQFIFKVQDDADPPNQSDENTFFIRILPIDDVPPALFPGTSLQMTVHEYQMTHFN
KDVLRYTDLDSDDRDLKYTITQPPTNNDASHPVSFGSIVLTEQPDIEVREFTQAQVNHHK
ISYRPPDVELGITDHVAQFHFKVEDAAGNSVKGVFTTFVQPVNNKPPEITNTGFTVFEGG
MHILRIADLNTTDPDTDSEQISFTLSQSPQHGQVQLSFADMTKGNAFSLSDISKGRISYV
HNGDETTSDAFKLDISDGVHIVPITVRIVVKPVDDETPILTLPVGILGSHLSVLENDATE
ITVSVIQGKDEDTDDLKLTFIVEDAPVYGEILVNGIPSNMFTQADLINGLVTYTHTSGEI
GISSKQDHFNLTLTDMSDEWAVGGNKITGLLVHVTILPVDNQAPLVTVLPTFNVTEGGKN
IIGGHQITIEDADTLIEDILCTIIIQPSSGYLENISPAPGSEKSRSGTAIRAFSIRDVLE
CHICYVQSIHKGVEPVEDRFTFMCSDGVNFSEREIFPIVIIPTNDEKPEILTSKIVVMEG
MNVILDTSILNGVDADIPVEDLTFIVSKPPKHGFILDQLISGSLPVTKFTLEQLNEASSI
LYEHDDSETTEDTFNIILTDGKHSVEGTLLIMVIAVDDETPRLAINDGLEIEIGETKEIN
NKVLKATDVDSEDSTLAFIIRYGPGQGFLQRKTEHWSFENITVGMNFTQMELDQGHVFYI
HNGQEGIRDLIKFDVTDGSNLLIDRYFYITVSNIDRVFPEVVSKGVSLKEGGRAMLTTDL
LSTSDLNSPDEHLVFTVTRAPVRGHLESTDAPGMPIMSFTQLQLAGSKIYYIHASDDEIK
MDSFEFEVTDGYNPVFRTFCVSIVDVDNKKPVLTIHELLVSEGQSKLITPFELTVEDQDT
ADEFLKFTVTQLPIHGKLLFNSSHPVTSFTKQDLNENLISYKHDGTESYKDSFSFTITDG
THTDFYVFPDTVFETHKPQVIKITISLIDNGVPQIVVNKGVQTLKVLPTSHLGYPITSKA
LKAEDRDSSPETLVFHITTQPEHGYLINLQKGNDSINRFTQADIDDLKICYVLKHKSNAT
SDAFFFYVEDSGGNTLKEQHFCVDWSWISLRKQNYEVDEQAGVLEVVLRRRGYLGETSFV
GIGTLDGSAEKEKDFGGTFQKQVQFNPGQSTATWRIKILSDGKYEQSETFNIILLEPVMG
VLESPAVATVKIVDPEDESTVFIPQARLVVEEDIGELLVPLHRRGDVSEELMVLCYTLQG
SATGTVPSTVLSFSDYISRQEVQGSILRFEKGQMENVCRVVIIDDSLYEPEESFNVSLSV
VFGGRLGSEYPSTCISILPDLDDAPMFYFSDAEYHVDESQGHIDVRVWRTGTDLSTAATV
TVRSRKMDPVSAEAGVDYMGISKNLDFAPGVNMQTIRVTILDDLGQPLLEGSEKFELVLH
MPSNAVLGEPAKATVFINDSISDRPKMQFKHPLLTGEESNRYLTAVVQRSGDITHRSTVR
CYTRQGSAQVASDFEERPNTDASVITFLPGDVEKPCVLTLVDDSVYEEEEEMRLVLGIAT
SDSPYGASIGTKNETLVKIKDSADKPIIKFAETKLSVNEPQESGKMSVVRIPVRRMGDSS
KVSVVRVHTKDGSAVSGEDYHPISQDVEFKEGETEHFVEVEVLFDGAREMREAFTVHLKP
DENMVAEIQMSKAIVYIEETNSMADVTFPSPPHVVSLLHYDDVKRTIHNAHPPAGYPVVC
VTACNPNHPEYEKTGSICASEHINDTLTHYRWLVSAPTGPNGVTSPMREVDIDTFFTSSK
IITLDSIYFQAGSWVQCAARAVNCNGDKGLELSSPIISISMEEGMCHPRKVGTVGTEPFS
AKLHYTSAEDPEHANLIKLSVTMPHTDGMLPVISTRALSNFELTLSPDGSRVGNHRCSNL
LDFDEVPTRHGFLTKATKSVEQVGESAPYQYSSTMRGLKTLHFYRNLNLEACLWEFVSYY
DMSELLTDCGGSIGTNGQVLNLVQSYVTLRVPLHVSYVFHSPVATSGWQHFDLQSELRLT
FVYDTAILWKDGISSPPQAELQGAFYPASMRINDLGRLVVNFHTKAHFRGLFVASHHASP
LTSVVISAAHPGLTFNLSLVRTEPTYNQPMQQWEFTSDLAVRDYSGTYTVKLIPCTTTLN
VEYSVSAVCDPREPVTFDLDIRFQQVSDPVAVEFNLNTRMFLLSERSVWLSDGSMGFGQE
SDAAFSEGDTIYGRVMVDLVQNLGDSFHCHIEKVFLCTGADGYVPKYNPTKFEFGCLADS
PSLLYRFKIIDKAQPETQVLSFGDMNFNAVLAVDDPSALSLVKQPGSDGFRLDSAPLFQV
AAGREWYIHTIYTVRSRDNANRGIRKRSVEYHSFMAHNTRARRSNQDVPVIAEMISAEHN
LGTNIMHITLERQQEVQAGEVPAEGLVQHDMAKPGTEEEAAMAAGVSFGLLLFSLTVAVL
FLMLRLQRRPEKEVRKCSEKEGLTVSGSMQLVILRSGFEGSDGSEV
NT seq
9321 nt
NT seq
+upstream
nt +downstream
nt
atgatggaactctatttgtggtttattctcttgtgcacagtggcaggtcggtgttccggg
cgccacgccagcggtcacggattgtcatatgcgcatagatcagagctctcagaggactcg
atacttgtagcgaacaacaggatacgcgtgcttttcggcagatcggttttcattgatccc
atcaatgatctggtgattgaagtgcagccgggagacaggtgcagcttaatagtgttggac
aatgatctgctgtcccaaagaccggggcatctttctcccaaaaagttcccgtgtgaattc
ggacccaatgatgtgaaatactcgcatttgggctccaggagccctgctggggaccgagtg
cggctgcagctcaggtacgatactcagactgaaaccatcatcataccgttcatgctggag
atcgagatccttttcacacagttggagatagtagttaaaaacatgccactcactgtagat
caactcaacggcattagcaattcaattgacagaagaatactggaatttatttatgatcga
aactctgagcagtgtgaggtcacatcattggcttcttgcaatgccttgcctagatatggt
gagctccctgataagaataaattagagaaaatgatggactgtgatgcttttctccgagca
gatattcgctacaagcatacttctattcacaagtcaccgaacagagactatattccaatg
gtcgtcgagctgagaaacaaagaaaataatttactgaagcaagagttctttcatatcatg
gtccgcatacaagaaggacgacgaaacagtcctccaaaacccagctttatggcgatgatg
atgatggaaatcgatcagtttgtcatgactgctttaacttcagacatgttggctgcagag
gacatggaatctgatcctgatgatctcattttcaacatcaccacccccttctctttcgag
gaaggctacattgtgagtactgatgatagaaatttaccaataacctctttttatcagaga
gatataaaggagctgaagatcgcatacaagcccccatctatggacttggacacggagaga
atagttcaaattgattttgaagtgttggacgccgatggtggggtttctgaaacatttgct
tttatgatcgttataaagcccatgaacacccttgcaccagtggtgactaaaaacacagga
cagcttctgtatgagggtcagtccaggcctctgttcacgcagaacaatttagaaatcagc
gatgaagacaacctggatagtgtaaggataactgttgtagatggtctccgtcatggtgat
cttactgttctgggctccagcagtaagtatttcacaccagctgatctgcaaattggtatt
gttgtctatcagcatgatggcagtgacacgtacagtgataacatcatttttagaatgaca
gatggcaagaacgaagtggagtttttgttccctattacgatcgttccaactgatgatgaa
ccccccattgtaaatgccaacacaggattggtggtatttaaaaaccaaatgattcccatt
tcacccctaatgttgagtgcagcagatattgactctgaagattccaccatcaagttcacc
attgaacctccactttcaactattggtgaagtgctgctaaggcagtctgaggctccagaa
gatccatcctcatggaaatttaataaggaaaatggattgtgtgagaaagctgtgaccgag
tggctacagaaagatattacagatgggaaacttttctacagacacacagggccccacatc
actgagactgtcactgatcagtttatctttaaagttcaggatgatgctgatcctccaaac
caatcagatgaaaacacattcttcattaggattctgcctattgatgatgttccacctgca
ctttttcctggcacgtctttacaaatgacagtccatgagtatcaaatgactcattttaac
aaggatgtccttcgttatactgatttggattctgatgaccgggatctgaaatacacaata
acccagccaccgactaacaacgatgcaagtcatccagtcagttttggttcaatagtttta
acagagcagcctgatattgaggtacgagagttcactcaagcccaagtgaaccatcataag
atttcctaccgtccaccagacgtagagctgggcatcaccgaccatgttgcacagttccat
ttcaaagttgaagatgctgctggaaacagtgtaaaaggagttttcactacatttgtgcaa
cctgttaataacaaacccccagagataaccaacactggtttcacagtctttgagggaggt
atgcatatacttagaattgctgaccttaatactactgaccctgatacagatagtgaacag
atttcctttactttaagtcagagtccacaacatggtcaggtccagcttagctttgctgat
atgactaaagggaatgctttcagcctatcagatatttcaaagggcagaatttcttatgtc
cacaatggggatgagacaaccagtgatgcttttaaactggatataagtgatggtgtgcat
attgtgccaattacagtaagaatagttgtgaaaccagttgatgatgaaacaccaattctg
accctcccagtgggtattcttggctctcacctgtctgtgttggaaaatgatgctactgaa
atcacggtcagcgtaatccaggggaaagatgaagacacggatgacctcaagttgaccttt
attgttgaggatgcccctgtatatggagagatcttggtgaatggaatcccatccaacatg
ttcacccaagctgatctaatcaatggtttggtgacatatacccatacaagtggtgagatt
ggaatttcctcaaaacaggaccattttaacttaaccctcactgacatgtctgatgagtgg
gctgtaggaggaaataaaatcactggactattggttcatgttaccattctcccagtggat
aaccaggcccctctggtaacagtacttcctacgtttaatgtcactgagggaggcaaaaac
ataattggaggtcaccaaataaccattgaggatgcagacacactcattgaagatatcttg
tgtactatcattatccagccaagttcaggttatttggagaacatctctccagcaccaggt
tctgagaagtccaggtctgggacagctattagggctttcagcattagagatgtcctcgag
tgccatatctgctatgtccaaagtatacataaaggagttgaaccagtagaggatagattc
acgttcatgtgctccgatggtgttaacttctctgagagagaaattttcccaattgtaatt
atcccaaccaatgatgagaagccagaaatattaacgagcaagattgtggtgatggagggc
atgaatgtcatccttgacacctctattctgaatggagttgatgctgatattcctgttgaa
gatctgacttttatcgtttcaaaaccacccaaacatggttttattcttgatcagctgatc
agtggttctctcccagttactaagtttactttggagcaactcaacgaagcttctagcatt
ctttatgagcatgatgattctgagaccacagaagacacatttaacatcattctaacagat
ggaaaacatagtgtagaaggtactcttctgattatggttattgctgttgatgatgagact
ccaaggttggccattaatgatggtttggagattgaaattggggagacaaaagaaataaat
aataaggttctgaaggcaactgatgtagactccgaagatagcacacttgcatttataatt
cggtatggtccgggtcagggatttctccagagaaaaacagaacattggtcctttgagaac
attacagttgggatgaatttcacacagatggaactggaccagggtcatgttttctatatt
cacaatggacaggaaggtattcgtgaccttataaagtttgatgtaacagatggtagtaat
ctactaatcgacagatatttctacatcactgtgagcaacattgatagggtgtttcctgaa
gttgttagcaaaggagtatctctaaaagaaggaggacgtgccatgcttaccactgaccta
ctcagtacaagtgatctcaacagcccggatgaacacctcgtcttcactgtcaccagagcc
cctgtgaggggacatctggaaagcactgatgctcctggaatgcccatcatgtccttcact
caacttcagctggctggaagtaaaatctactacatccacgcttcagatgatgaaatcaag
atggacagttttgagtttgaggtcactgatggatataaccctgtttttcgcaccttttgt
gtatcaatagttgatgttgacaacaaaaaacctgtcctgaccatacatgagcttctggtg
tcagaaggtcagtctaaacttatcacaccatttgagttgactgtagaggatcaggataca
gcagatgaattcctgaagttcactgtcactcagttgcctatccatggtaaactgctcttc
aacagcagtcatccagttacttccttcacaaagcaagacctgaatgaaaacctcatcagt
tacaaacatgatggcacagagtcttataaggacagcttctcgtttaccatcactgatgga
acacacactgatttctatgtatttcctgacacagtatttgaaactcacaagcctcaagtc
ataaaaatcaccatttcattgatagacaatggtgtaccacaaattgtggtgaacaaaggt
gttcaaacgttgaaggtcttgccaacgagccacctaggttatcctatcaccagcaaagcg
ctaaaggcagaagacagagacagcagcccagagaccctggtttttcacatcaccacacaa
ccagaacatggttacctgatcaaccttcagaaggggaatgattccatcaatagatttact
caagcggacattgatgacctgaagatctgctatgtgctgaaacataagagcaatgccacc
agcgatgccttttttttctatgttgaagacagtggagggaatacactgaaagagcagcac
ttctgcgttgactggtcctggatctctctacggaaacagaattacgaggtggacgaacag
gccggggtgctagaggttgtgctccgacgcagaggatacttgggggaaacttcttttgta
ggaattggtactttggatggcagtgctgagaaggagaaggactttggggggacatttcag
aagcaggtgcagtttaacccaggccagagtacagctacatggaggatcaagatcctttca
gatgggaagtatgagcagtctgagaccttcaacatcattctgttggagccagttatggga
gtactggagtcaccagcagtggctacagtgaagatcgtggatccagaagatgagtctaca
gtctttattccccaggcaagacttgttgtcgaggaagacattggagagctgctggtccca
ttacacagaagaggagatgtcagtgaggagctgatggtgctctgctacacgctgcaaggc
tcggctacaggtacagtccccagcactgttctttctttctcggactacatctcccgacag
gaggtacagggcagtattctgcgttttgaaaaaggacagatggagaacgtttgccgtgtg
gttatcatcgacgactcgctgtatgagcctgaggaaagctttaacgtctccctcagtgtg
gtgttcggtggccgtctcggctccgaataccccagcacatgcatcagcatcctgccagac
ctggacgatgctcccatgttctacttcagtgatgcagaataccatgtagatgagagccaa
ggtcacattgatgtgcgagtgtggaggacaggaacagacctctccacagcagcgacagtc
actgtcagatcccgtaaaatggatccagtgtcagctgaagctggagtggactacatgggc
atcagtaagaatttggactttgccccaggggtgaacatgcaaaccatccgggtcacaatt
ctggatgatctcgggcagccactgcttgaaggcagtgagaaattcgagcttgtcctgcac
atgccctcaaatgcagttctgggagagccagcaaaagccaccgtcttcattaacgattcc
atctcagaccggccaaagatgcagtttaaacatcctcttctgactggagaagagagcaat
agatatctcactgctgtggtccagcgcagtggagatatcacacaccgatccactgtgcgc
tgttacacacgccagggatctgctcaggtggccagtgactttgaagagagacccaacact
gacgcgtcggtcatcaccttcttaccaggtgatgtggagaagccatgcgtattaactttg
gtggacgactccgtgtatgaagaggaggaggagatgaggcttgtgctcgggattgctacg
agtgactccccgtatggagcatccataggcacaaagaatgaaacacttgtcaagattaaa
gatagtgctgacaagccaattatcaagtttgctgagacaaagttgagtgtgaacgagcca
caagagtcagggaagatgagcgttgtgcggatccccgtgcgtcgaatgggagattcctcc
aaagtgtccgtggtgagagtacacactaaagatggttcagctgtgtcgggagaagactat
caccccatctctcaggatgttgaatttaaggaaggtgaaacagaacactttgtggaggtg
gaggtcctgtttgatggggccagagaaatgagagaagccttcactgtccacctcaaacct
gatgagaacatggtggctgagatccagatgtccaaggccatagtgtatattgaagagacc
aacagtatggccgacgtcacattcccctcaccgccgcatgttgtgtctctgctgcactat
gatgatgtcaaaaggactatacacaatgctcacccaccagccggctatccagtggtctgt
gtgacggcatgtaaccccaatcaccctgaatatgagaaaacaggctcaatatgtgcaagt
gagcacatcaatgacacgctaacacactatcgttggcttgtcagtgcccccactgggcca
aatggtgtcaccagccctatgagggaagtggatatcgacacctttttcacctcctccaag
ataatcacgctggactccatctacttccaagctggctcatgggttcaatgcgccgcccgt
gccgttaactgcaatggggacaaaggcctggagctcagcagccccatcatctccatcagc
atggaagagggaatgtgtcaccctcgtaaagtgggcacagtaggcactgagcctttctct
gccaagctccactacaccagcgctgaggacccagaacatgccaacctcatcaaacttagt
gtcaccatgccccacacagatggcatgctccctgtgatctctactcgtgctctgtccaac
tttgagttgaccctgagtccagatggcagccgtgtagggaatcaccgctgctccaacctc
ctggactttgacgaggttccaacacggcacggtttcctgacaaaggctactaagagtgtg
gaacaagtaggagagagtgctccctaccaatacagctctaccatgaggggcttgaagaca
ctacacttctacaggaacctcaacctggaggcctgtctgtgggagtttgtgagttattat
gacatgtctgagctgctcacagactgcggcgggagcattgggactaacgggcaggtgcta
aatctggtgcagtcctatgtgactctgcgcgtccctctccatgtttcctatgtatttcac
tcacctgtggccacaagcggctggcagcactttgacctccagtccgagctgcggcttact
tttgtttacgacactgccatcttgtggaaggacggcatcagcagccctcctcaagctgaa
ctgcaaggagctttttacccagccagcatgaggattaacgatctgggccgtctggtagtc
aacttccacaccaaagctcactttcgggggttgtttgtggcctcgcatcatgcgtctcct
ttgacctcagtggtcataagtgcagcccatccagggttaacctttaacctttccttggtc
agaacggaacccacctacaaccagcccatgcaacagtgggaattcacttcagacttggct
gtacgtgattattctggcacctacacagtgaagctaatcccctgcaccacgaccttaaac
gtcgagtactccgtttctgcagtgtgtgaccccagagagccagtcacttttgacctggac
atcagattccagcaggttagtgatcctgttgctgtcgaattcaatctgaatacacggatg
ttcctgctgtcagagagatctgtgtggctctctgatggatctatgggctttggacaggag
agcgatgcagctttttcagagggtgatacaatctacgggcgagtgatggtggatctggtg
cagaacctgggggactcgtttcactgtcatattgagaaggtttttttgtgtactggagca
gatggatatgtgccaaagtacaaccccaccaagtttgagtttggctgcttggcagattct
ccttccctgttatacagattcaaaataattgacaaagcgcagccggagactcaggtgctg
agttttggtgatatgaacttcaacgctgtgctggcggtagacgacccgtcagccctttct
ctagtgaagcagcctggatcagatgggttcagactggattcagctcccttattccaggtg
gcggcaggccgtgaatggtacatccataccatttacactgtacgctccagagacaatgca
aaccgtggcatcagaaaaagaagcgtggagtaccattccttcatggcacacaacactcgt
gccaggcgctcaaaccaggatgtgcctgttattgctgaaatgatcagtgctgagcacaat
ctaggcaccaacatcatgcacatcactctggagcgccagcaggaagtgcaggctggtgag
gttcctgctgaaggtctggtacagcatgatatggccaaaccgggcactgaggaagaggca
gcaatggcagcgggagtttcatttgggctgctgctcttcagccttactgtggctgtgctt
tttctaatgctgcgattacagaggaggccagaaaaggaggtgagaaagtgctccgagaag
gagggactaacagtctctggcagcatgcagctagttatattgaggagtggttttgaaggc
agcgacggctccgaggtgtga
DBGET
integrated database retrieval system
