Neoarius graeffei (lesser salmon catfish): 132873642
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Entry
132873642 CDS
T10798
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132873642
Cell adhesion molecules [BR:
ngra04515
]
Cadherins
Cadherin related
132873642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Fibulin_C
Cadherin_4
K319L-like_PKD
Big_9
TMEM154
CADH_Y-type_LIR
RIFIN
Glrx-like
Motif
Other DBs
NCBI-GeneID:
132873642
NCBI-ProteinID:
XP_060765375
LinkDB
All DBs
Position
25:complement(19489993..19722023)
Genome browser
AA seq
3281 aa
AA seq
DB search
MKLFGGSGDNNCRLRMFLLVFLTVELLTVVVNADATASILELQLDEEQPAGTIVGDISAG
LPPGETASLYFISDHEGTSVGTDLHIDETTGIIKTARRLDREERDHYSFIAVTMTGLTVK
VSITVNDINDHAPVFPKNKAYLKIPEQTAVGTRFSLEPATDSDKDQLTTQGYLIKDGNVG
QVFRLETKRAANKVLYLDLVVNGVLDREKRASYSLVLEAFDGGSPKKTGQMTLEVTVQDI
NDHAPAFNQSRYHAIISESLPQGSDILQVFASDADEGDNGLVLYEINRRQSDPDRYFVID
SRSGIITLNKPLDYEVRKVHELVVQAKDNASHPEITNAFVTIHVRDYNDNQPTMTIIFLS
EDGSPRISEGAQPGQYVARISVSDPDYGEYSNVNVSLEGGDGKFALTTKDNIIYLICVDQ
VLDREERDSYELRVMATDSGTPPLRAESSFTIQVTDINDNPPLFDQQAYKQTIPEVVYPG
SFVLQVTARDKDQGPNGDVRYSILPNKGTHSNWFTIDAVTGIITTATELDYETDRKASIK
VVATDGGKPPLSSTAMVEISLQDINDNRPVFGSSVYNVSIKENTAAGTCFLEVTAIDADG
GSFGTITYSIGSGPSSSSPAVFSINKETGHICTSTVLDRDEGFESYEFTVTATDGGGLSS
SATVNVALLDINDNRPMFYPINYAVSLSSQSAPGTSVIRVSAHDPDAGDNGKVTYRTVPG
GGSNFFTLNKDTGVISLSRSLHGKANSVITMLITALDGGGLTVPVNARVNISVVAGSVAP
PIFEQPQYFFTVPEDVLRGTEVGVVLANSKNGATKDISYTISSGDPEGYFTVDIETGALR
TSLPLDHEAWPSLELEVQARSGSPPVFAQTLVRITITDVNDNAPTFLPSSSESLLLPEAT
KMGTIVYRVKAEDRDSGANGQLSFDLLSSESQRTFSVDRSSGEIRLIGSLSYESAPRYDL
LVLAKDCGAPQLSATFTLVVHIQAENDQGPVFDTMTYRVELKENTPLNTRFLQVRALSRD
HGGNGASSTSVPLSYHLRPDGDAAGFGIISDSGWLFVKSALDREAKDIYLLTVLASSGRG
QLKKTGSATVRVSVTDENDNSPRFSQDRVFLAVRENLPAGTGFGRVSATDRDAGLNSRLT
YKLLHTDRNFQINSQTGEISTRVALDREHQSSYQLVVVVQDGGTPPRSATGTAHVTVLDE
NDNAPLFSHVLPGRELIIQVQEGLPAGSLLGTLQAKDPDEGENGTIFYSLSGSRAERFSL
NPNTGELRSASALRRTERSEYSLTVTASDRGAPPQSISSILRIQVASSARTPPKPNTLSM
TLNTMEGTSPGSVIGSVHLHGQRDVLLDGQITYLVVGGTDQDGNFMVDRLTGDVYLAREL
DYEMGAHYTLQIEANDFSKASPSSHVIQLDINVQDSNDHAPQFPEDPVTIVVPENMQPGF
SIYAFQASDKDGSGPNSDVRYSILQHWPDRSDLLSLDPITGVLTLGQELDHEETSSLFLV
VRATDSATDPNQRRWSSVTARIFVTDENDNAPVFSSPTAVSVMEDKPMGFVLLYVIARDA
DQGENGRVSYRIQAGNTAGRFSLNPNTGSLSILKALDREEQDSYNLTIVAEDHGTPQHST
TQVLSVQVIDVNDEAPWFESSEYEVQVQENQPAGTTILTVSATDRDQGANGHVTYGGVTV
EGFVISPETGVISLTKVLDREQQDHYSITVYAKDGGMPPNFAKAKVHISVIDENDNAPAF
GRLRYSLELPENLDPVEIFRVKATDYDSGDSGRVEYRITAGDPDGDFQLDSSSGALSTSR
PLDRERKDRYSLEVIAQDHGSPSLTSTATLEVTVLDINDNSPTFSNSSYATDISENAAIG
SLVLEVTASDADEGKNGQILYFLSKEARGAFTIDPDTGRILTAAVLDREKIAFYSFQVCA
VDSSPAAPYNTTAQVTVTIMDMNDNAPFFIQDPLIINVSSRRISTNHVVATMRAEDKDFG
ANGSVFYRFAKPVQGFSINSLTGEIQTTEALNSLTQSQYILIVEAMDQGSPPQSSLGVVI
IYVKEQNYDGIRFSRSPRDVSIQENAAKGTAVAQAQAQYPDGTRGGITYSIFSGNKQQSF
SISSSTGEIWVQSSNGLDFEDTPRLRLVVKAETATSSSFMAVNLILQDVNDNLPRFQLQN
YIAYMHEAHGYDSPIIQVVAEDVDQGPNGQVTYSIQSSGRSGLFKIDPLTGSVTTTAIMD
REIWMQTKLVIMATDRGSPKLAGSATVTVIIVDLNDNSPTIPLPREVRVPENSLIGTEIT
MVTGNDVDSGPALSYSLYLDKNSQGKFGIHRYSGRVFLTSPLDYEEKTWYTLTVKASDSK
HQSDANLTVLVEDVNDNVPTFTQDLYQVALAEHSPPGTPVLTVTATDRDSGENGRVTYRL
ISSSKQGFYIDSSNGTLFTTQKAEFDPERPTVRVVVEAYDGGKPSLSAVATIQVQLTDVN
DNAPMFHQSDYRAAVSEDQLPGSTILTLEAVDGDLSQENAGFDFAIASGNIGNAFQIESS
VRFIEGHGFQTVGTLILAEQLDFEVTSRYNLTIVVSDRGVPQRSSSVPAVITVNDVNDNP
PAFSRAEYVVSLSEGASAGSEILRLSAADPDSAPNAEIQYSISSGDDVGLFSVDKWTGAL
RLQKPLDRETQPSHVVIIKASDGHGHFALAPINVEVKDINDNRPYFPIETMTASIRENQP
PNSAVTVLHAIDHDTGVYGQLKYFILDRSSQGKDFFMVDQNTGEVCSRQSFDFEKVNSFH
FMALAMDAGNNSATVTVQVYVTGEDEYDPVFTSSDFSFEVPEGAQKGQSIGQVQAKDEDG
GVDGIVLYSLPSSSTYFDVNKTTGVIYLKMDNAISSSGQSRSKRETRLMTMDVIAHSPLE
TSRVATAQLTIDVTNTSFGLANDFNILLISIIAASLGVIVILVIIAVALYLVKSRRKKKG
QNTGTAASDTALQQLDESKSAGGERIYHQTLPGYTGDQGGGGTSYTRGGSLDPSHSSGRG
SAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSGIQQDADQLSDISGETGTLDASQ
WFKGKKLGSLSGTLLSGQVPVYRDEGGGYLGVGRGLNISHPKDYGFPEDGKPSVDGSLTA
IVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDESLPPNNPRRPFQPKIKTDPK
PRIDPPPLITSVAHPGAKSVPPKPAITRTFPHLATLRRSPISHEGSISSAAMSPSFSPSL
SPLAARSPAVSPFGVTQGPSASMISTTEHSLEHSDDTEMRI
NT seq
9846 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatttggaggctctggggacaataactgtagactaaggatgtttctacttgtt
tttttgactgtggaattgttaacagtggtggtcaatgcggatgcaacagcaagcatcctg
gagttacagctggatgaagagcagcctgcagggacgatagtgggtgacatcagtgctggg
ttaccacctggagaaaccgcctccctctacttcatatctgatcatgagggcactagcgtg
ggaacggacctccacattgatgagaccactggcattatcaagactgctcggcgtctggac
cgggaagagagagaccattatagctttatagcagttaccatgactggcctcacagtgaag
gtatccatcacagtgaatgacattaatgatcatgctccagtgttccccaagaataaggcc
tatttgaaaatccctgagcaaactgcagtggggacaagattttccctggagccagccact
gattctgacaaagatcagctcaccactcagggatatctcatcaaagatggaaacgttgga
caggtgttcagactggaaactaagagggcagcaaataaggttctttacctggacctggtg
gtcaatggtgtccttgaccgagaaaagagggcttcttactctttggttttggaggccttt
gatgggggatctcctaaaaaaacagggcaaatgactctggaggtgacagtgcaagatatt
aatgaccatgctcctgcttttaatcagagcagataccatgccatcatctctgaaagtctc
ccacaaggtagcgatatcctacaagtgtttgcctcagatgcagatgaaggagacaatggc
cttgtgctttatgagattaaccgcaggcaaagtgaccccgatcgatactttgtcatcgac
tctcgttctggaattatcacactcaacaagcctttggactatgaagtcagaaaggtccat
gagcttgtcgtccaagccaaagacaatgccagccacccagagatcacgaatgctttcgtt
actatccatgtccgtgactacaatgataatcaacccaccatgaccatcatcttcctcagt
gaggatgggtcacctcgaatatctgagggtgcccagcctggacaatatgttgcccgtatt
tcagtctcagaccctgattacggtgaatactcaaatgtcaatgtctctctggaaggtggg
gatggtaagtttgccctgactactaaggacaacatcatctaccttatctgtgtggaccag
gttctggatcgtgaagagagagactcgtatgagctccgggtcatggctacagattctggc
accccaccactccgagctgaatcctcttttacaatccaagtcacagatatcaatgataac
cctcctctgtttgatcagcaggcatacaaacagactattccagaagtggtttacccaggt
agctttgtgctacaagtaacagcacgagacaaagaccagggcccaaatggtgatgtccgc
tacagcatcctgcccaataaggggacacattctaattggttcaccatcgatgctgtgaca
ggtatcatcaccacagctactgagctggattacgagacggatcgaaaagcaagtatcaag
gtagtggctacagatggtggaaagccccctttatcctctactgccatggtggaaatcagt
ctacaggatattaatgacaacagaccagtttttgggagcagcgtctataatgtgtccatc
aaggagaacacagctgcagggacctgcttccttgaggtgacagcaatcgatgctgatggc
ggttcatttggcacaataacctattctataggatcaggaccttccagttcttctccagca
gtgttcagcattaataaagagacagggcatatctgcactagcacagtcctggaccgagac
gagggatttgagagctacgagttcacagtcactgctactgatgggggtggcctgagctca
tctgccaccgtgaacgtggcattgctggacattaacgataacaggcccatgttttacccc
ataaactacgcagtcagtttgagctctcagagcgctccaggaacctccgttatcagagta
tcagcccacgaccctgacgcaggagataatggcaaagtgacgtaccgcacagtgcctggc
ggaggctcaaacttctttacgcttaacaaggacacaggggtgatctctctttcccgctcc
ttgcatggcaaagccaactctgtcattacgatgttgatcacggcattggacggaggtggg
ctcacagtgcctgttaatgccagagtgaacatcagtgttgtggctggctctgtagcgccc
cctatctttgagcagccacagtacttctttaccgtgcctgaagatgtgctgaggggcaca
gaagtaggtgttgtgcttgccaacagcaagaacggagccactaaagacatctcatacacc
atctcctctggtgatccggaaggctacttcaccgtggacatagagaccggagctctgcgc
accagcctgcccctggatcatgaggcttggccctcactggagctggaggtccaggctcgc
agtggctctcctccagtgtttgcccagacactggtccggatcaccatcactgacgtcaat
gataacgcacccaccttcctgccttcgtcatcagagtctctgctgctgcctgaggctacc
aagatgggaactattgtgtaccgggtaaaggctgaggaccgcgattcaggagccaatggg
cagttgagctttgatctgctttcatctgaaagccagcgcacattcagtgtggacagaagc
agcggggaaatccgtctgataggaagcctttcctatgaaagtgctcctcgttacgacttg
ctggttctggccaaagactgtggtgcccctcaactcagtgccactttcactcttgtagtg
cacatacaggccgagaatgaccaggggccagtgtttgacacaatgacctaccgtgtggag
ctgaaagaaaacacaccactgaatacacgtttcctgcaggtacgtgccctgagtagggat
cacggtggaaatggagcctcctcaacttctgtgccactctcttaccatctccggcctgat
ggagacgcggcagggtttgggatcatctcggacagtggatggttgtttgtgaagagtgcg
ctggatagggaagccaaagacatctaccttctcactgtactggccagctcaggaagggga
cagctgaagaaaactggcagtgccacagtgcgggtctccgtgacagatgaaaatgataac
tcacctcggttttctcaggacagggtcttcctggcagtacgggagaacctgcctgcggga
acaggatttggaagagtttcagctactgaccgtgatgctggactcaacagccggcttact
tacaaactactgcatactgatcgcaacttccagatcaactctcaaactggtgagatcagt
accagggtggctctggatcgtgaacaccagtccagctaccagctggtggtggtggtacag
gacggaggcactcctcctcggagtgctacaggcaccgcccatgtcactgtgctggatgag
aacgacaacgccccactcttcagtcatgtgttgcccggcagggagctgattatccaagtg
caggagggtctgcctgctggttcactcctgggaaccctgcaggctaaagatccagatgaa
ggagagaatggcacgatcttctactcattatctggctccagagcagaacggttctctcta
aatccaaacacaggagagctgcgttctgcctccgcgttgaggagaactgaaaggtctgag
tacagtttaacggtaactgcctcagatcgtggggcaccacctcagagcatctccagcatc
ctgcgcatacaggttgctagctcagcgaggactccacccaaaccaaacaccctgtcaatg
acacttaacacaatggagggcaccagcccaggctctgtcataggttcagtgcacctacat
ggccaacgtgatgtgttgcttgatggacagataacttaccttgtagtaggtggcacggat
caagacggcaattttatggtggaccgtctcactggggatgtgtacttggccagagaattg
gactatgaaatgggagctcactacaccttgcagattgaggcgaatgacttctccaaggcc
tcccctagcagtcatgtgatccagctggatatcaatgtgcaagacagtaatgatcatgca
ccacagtttcctgaagatcctgtgaccattgttgtccctgagaacatgcagccaggcttc
tctatttatgcattccaggcctctgataaggatggcagtggccccaacagcgatgtacgg
tactctattctgcagcattggcctgatcgatcagatcttctgtcccttgatcccatcact
ggtgtgctcactctgggccaagagctggaccatgaggagacctcaagcctttttctggtg
gtccgagcaactgactcagctacagatcccaatcaaaggcgctggagttcagtcacagcc
cgcatcttcgtgactgatgaaaatgacaacgctccagtattcagctcccctacagcagtc
agtgtaatggaggataagccaatgggctttgtgctgctctatgtcattgcccgtgatgca
gatcaaggagaaaatggcagggtgtcttaccgcattcaggcaggcaacacagcaggacga
ttcagcctcaatcccaacactggctctctttccattctcaaagctctggaccgtgaagag
caggacagctacaacctcactattgttgcagaggatcatggaacacctcagcactccact
actcaggtcctgtctgtccaggttattgatgtgaacgatgaggctccgtggtttgagtcg
agtgagtatgaggtccaagtccaagagaatcagccagccggaaccaccatactcactgtc
tctgctactgacagagaccaaggtgcaaatggacatgtaacctatggaggcgtgacagtg
gaaggctttgtcatttcacccgaaactggtgtcatctcacttaccaaagtcctagacaga
gaacaacaggatcattacagcataaccgtatatgccaaagatggagggatgccccctaat
tttgcaaaggccaaagttcatatttcagtaatagatgagaatgataatgctccagcattt
gggaggctgaggtacagtctggagctgccagagaaccttgatccagtggagatttttaga
gttaaagctactgactatgacagtggggacagtggccgagtggagtacaggataactgct
ggggacccagatggtgacttccagctggacagcagttctggtgccctgtccacctctcga
cccctggacagagagagaaaagacaggtattctctggaagtcattgctcaggatcatgga
agcccttctcttactagcacagctactttggaagtcactgttttggacatcaatgataat
agtcccacatttagcaatagcagctatgctacagatatttcagagaatgctgctattggg
tcactagttctggaagtgacagccagtgatgctgatgagggcaagaatggccagatccta
tacttcctaagcaaagaagcaagaggtgcattcactatagatcctgatacaggtcggatc
ctcacagctgccgtactggaccgagagaaaatagcattctacagcttccaagtgtgcgca
gttgactcatcccctgctgcaccctataacaccacggcccaagtcacagttaccatcatg
gacatgaatgacaatgcaccctttttcatccaagatcctctcataatcaacgtatccagc
aggaggatatccactaaccatgtggttgccactatgagagcagaagataaggactttggt
gccaatggttcagtattctatcgttttgccaaaccggtgcaaggcttctctataaactct
ctgactggagagatccaaaccactgaggcactgaacagtctgacccagagccagtacatc
ctcattgtggaggctatggaccagggcagccctcctcagtcctccctgggggtagtgatc
atctatgtgaaggaacagaactacgatggtatccgcttctcccgtagccccagagacgtt
agcatccaggagaatgcagccaaaggtactgcagtggcacaggcacaggcgcagtatcca
gatggcacccgtgggggcatcacgtacagcatctttagtgggaacaaacagcagtccttc
agcatcagctccagcacaggtgagatttgggtccagagctccaatggcctggattttgag
gacacgccaagactccgtctagtggtgaaggctgaaactgcaacttccagctctttcatg
gctgtcaacctgattcttcaggacgtcaatgacaacttgcctcgctttcagctacagaac
tacatagcatacatgcatgaggcacatggctatgactctccaattattcaggttgtagct
gaagatgtggatcagggcccaaatggtcaggtgacctattccatccagtcttctggccgt
agtgggctgtttaaaattgaccctctgactggcagtgtcaccactacagccatcatggac
cgggagatctggatgcagaccaaactagtgattatggcaaccgatcggggcagccccaag
cttgctggctccgccactgtaactgtgattattgttgacctcaatgacaatagtcccaca
atccctctgccaagagaagtgcgagtgccagaaaactcacttatcggcacagagattacc
atggtgacagggaatgatgttgactcgggcccagcactgtcttattcgctatatctggac
aaaaactcacagggcaagtttggaatccaccgctacagtggcagagtgtttttgacttct
ccattggactatgaggagaagacgtggtacacactaactgttaaagcctcagactctaag
catcagtctgacgctaatctgacagtactggtggaagatgtgaatgacaatgtgcctacc
tttacacaagacctataccaggtggcgctggcagaacattctccacctggaactcctgta
cttacagtaacagccacagatcgggactcaggagagaacggaagagtcacctaccgactg
atatcatcatctaaacagggcttttacatcgattccagtaatggcacattgtttaccact
caaaaagctgaatttgacccagagcgtcccactgtgagggtggttgttgaggcttatgat
ggaggaaagccatctctatctgccgttgctacaatccaagtccagctgacagatgtgaat
gacaatgcccccatgtttcatcagtcagactacagagccgcagtgtctgaggaccagctt
cctggaagcaccatcttgaccctggaagcagtggatggtgacctctcccaggagaatgca
ggttttgattttgctattgcaagtgggaatattggaaatgcttttcagattgagagtagt
gttcgtttcatagaaggtcatggcttccagacagtaggcacactgatcctggcagagcag
ctggactttgaggttacatctcgctacaacctcaccattgtggtatctgaccgtggtgtt
ccccagcgcagctccagtgtgcctgctgttattactgtgaatgatgtcaatgacaaccct
ccggcattcagccgtgctgagtatgtagtgtctctgagcgaaggggcatcagctggtagt
gaaatcttacggctgtctgcagctgatccagattcagctccaaatgcagagatccaatat
agtattagctccggagatgacgtgggcctattctcagtggacaaatggactggagccctg
cgcctgcagaaacctctggaccgggagactcagccttcccatgtagtaattattaaagcc
tcagatggtcatggtcactttgcactggctcctatcaatgtggaggtgaaggatattaat
gataacaggccctacttccctattgagaccatgactgcaagcatacgagaaaaccagccc
cctaattcagcagtcacagtgttgcatgccatagaccatgacactggggtctatggacag
ctgaagtattttatattggacagatctagtcaaggaaaagacttctttatggtggatcaa
aacacaggagaggtgtgttctcgccagtcatttgactttgagaaggtgaactctttccat
ttcatggctttggctatggatgcaggcaacaactctgccacagttactgtacaagtctat
gtcacaggggaagatgagtatgatccagtcttcacctcctcagacttttcatttgaggta
ccagagggagcccagaagggccagagcattggtcaggtgcaagccaaagatgaggatggt
ggtgttgatgggattgtgctttactcattaccaagcagctccacatactttgatgtcaac
aagaccactggtgtgatctacctcaaaatggataacgctattagttctagtggccaaagc
cgttccaaaagggagacacgccttatgaccatggacgttattgctcatagtcctttagaa
acctcaagggttgcaactgcccagctaactattgatgtcaccaacacatcctttggtctt
gcgaatgactttaacattctcctgatcagcatcattgcagcctctcttggtgtaatagtc
attttagtcataattgctgtggcgctatacctagtgaagtccagacgcaagaagaaaggg
cagaacactgggacagcagcttcagacacagcactgcagcagttagatgaatccaaatca
gcaggtggggagaggatctatcaccagacccttccagggtatactggcgatcagggagga
gggggaacttcctacacaaggggaggctccttggatccatcccactctagtggaagagga
tcagccgaagctgcagaagatgatgaaatccggatgataaatgagtatccaagagtggct
agcattacctcttccatgcaagagcacatctctgcccgagggcctgactcaggtatacag
caggatgctgaccagctctctgacatttctggtgaaacaggaacactagatgcaagccaa
tggttcaaagggaagaagttgggaagtttaagtggcacgttgctctctggtcaagttcct
gtctatagagatgaaggaggtggctaccttggagtgggcagagggctgaacatatcccat
ccaaaggattatgggttcccagaggatggcaaaccttcagttgatgggtctctcacagct
attgttgctagtgatgaggagctgcgaggcagctataattgggactaccttctcaattgg
tgcccacagtttcaacctcttgctagtgtttttacagaaattgccaggcttaaagatgag
agcctaccacccaacaacccacgtagacctttccaacctaaaatcaagacagatcctaaa
ccaagaattgacccaccccctctcattacatcagtagcccaccctggtgccaagtctgtt
ccacccaagcctgctatcactaggacatttccacacctagcaaccctcagacgctctcct
attagccatgagggttccatctcatccgcagccatgtctcccagcttctctccatcgctg
tcccctctggcagcccgatcaccagccgtctccccttttggtgttacacaaggcccatca
gcctcaatgattagcaccacagagcactccctggagcacagtgatgatacagagatgaga
atctaa
DBGET
integrated database retrieval system
