Neoarius graeffei (lesser salmon catfish): 132873744
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Entry
132873744 CDS
T10798
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132873744 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132873744 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132873744 (vps36)
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
132873744 (vps36)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132873744 (vps36)
Exosomal proteins of colorectal cancer cells
132873744 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
GRAM
Laminin_II
Flu_M1_C
Motif
Other DBs
NCBI-GeneID:
132873744
NCBI-ProteinID:
XP_060765534
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All DBs
Position
25:35178874..35206204
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AA seq
381 aa
AA seq
DB search
MDRFMWTSGLLEINETLVIQQRGVRLYDGDDKVKLDAGVVLLSTHRLIWRDQKNHECCIC
IPLSQIIFFEEQAAGIGKSAKIVIHLHPAPANKEPGPYQNSKFSYIKLSFKEHGQIEFYR
RLSEEMTQKRWENTPVSQPITQAGLKAGRTRAVGIVGIERKLEEKRKETDKNISEAFEDL
SKLMEKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTHY
HMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDMVNACKLFESLKLPL
RLRVFDSGVMVVQLQSHSEEEMIASAIDNVSEKGSLTAEEFAKLLGLSVLLAKERLLLAE
KMGHLCRDDSVEGLRFYPNLF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattcatgtggaccagtggactccttgaaataaatgaaaccttagttattcag
cagaggggtgtcagattatatgatggagacgacaaggtgaagctcgatgcaggagtggtc
ctcttgagcacacatcgattaatctggagggatcaaaagaatcatgagtgctgtatatgt
ataccgttgtctcagatcatcttctttgaggagcaggctgcaggaattgggaagagtgcc
aagattgtcattcatctacatccagctcctgctaataaagagcctgggccataccagaac
agcaagttctcctatattaagttatcctttaaggaacatgggcaaatagagttttacaga
cgtctgagcgaggaaatgactcagaagaggtgggagaatacgccagtgtcacagcccatt
acacaagcaggactgaaggcaggaagaacacgtgcagtggggattgttggcattgagcgg
aagctggaggaaaaaaggaaagaaacagacaaaaacatttcagaggcatttgaagatctc
agcaagcttatggagaaggctaaagagatggtcgagctttccagatccatcgccaacaaa
atcaaagacaaacagggggacatcactgaggatgagactatccgcttcaaatcatatttg
ttgagcatgggcatcgccaaccccgtaaccagggaaacgcacggctcaggcacgcattac
cacatgcagcttgctaaacagctgggagacatgttgcaggcaccactggaggaacgaggg
ggtatgatggccctcacggaggtctactgtttggtgaatcgagcacgagggatggagctt
ctttctcctgaggacatggtcaatgcctgcaagttgtttgaatctctgaaactccctctc
aggttgcgagtgtttgacagtggcgtaatggtggttcagcttcaatctcacagtgaagaa
gagatgattgcatctgctattgataatgtgtctgagaagggctccttaacagcagaggag
tttgctaaacttttaggactgtctgttcttcttgcaaaagagaggctgctgcttgctgag
aaaatggggcatctatgcagagacgactctgtggaaggcctgcgtttttatcccaacttg
ttctga
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