Neoarius graeffei (lesser salmon catfish): 132873744
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Entry
132873744 CDS
T10798
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132873744 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132873744 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132873744 (vps36)
Membrane trafficking [BR:
ngra04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
132873744 (vps36)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132873744 (vps36)
Exosomal proteins of colorectal cancer cells
132873744 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
NAI2_C
Xre-like-HTH
GRAM
BBL5_2nd
Flu_M1_C
Motif
Other DBs
NCBI-GeneID:
132873744
NCBI-ProteinID:
XP_060765534
LinkDB
All DBs
Position
25:35178874..35206204
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AA seq
381 aa
AA seq
DB search
MDRFMWTSGLLEINETLVIQQRGVRLYDGDDKVKLDAGVVLLSTHRLIWRDQKNHECCIC
IPLSQIIFFEEQAAGIGKSAKIVIHLHPAPANKEPGPYQNSKFSYIKLSFKEHGQIEFYR
RLSEEMTQKRWENTPVSQPITQAGLKAGRTRAVGIVGIERKLEEKRKETDKNISEAFEDL
SKLMEKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTHY
HMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDMVNACKLFESLKLPL
RLRVFDSGVMVVQLQSHSEEEMIASAIDNVSEKGSLTAEEFAKLLGLSVLLAKERLLLAE
KMGHLCRDDSVEGLRFYPNLF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggatcgattcatgtggaccagtggactccttgaaataaatgaaaccttagttattcag
cagaggggtgtcagattatatgatggagacgacaaggtgaagctcgatgcaggagtggtc
ctcttgagcacacatcgattaatctggagggatcaaaagaatcatgagtgctgtatatgt
ataccgttgtctcagatcatcttctttgaggagcaggctgcaggaattgggaagagtgcc
aagattgtcattcatctacatccagctcctgctaataaagagcctgggccataccagaac
agcaagttctcctatattaagttatcctttaaggaacatgggcaaatagagttttacaga
cgtctgagcgaggaaatgactcagaagaggtgggagaatacgccagtgtcacagcccatt
acacaagcaggactgaaggcaggaagaacacgtgcagtggggattgttggcattgagcgg
aagctggaggaaaaaaggaaagaaacagacaaaaacatttcagaggcatttgaagatctc
agcaagcttatggagaaggctaaagagatggtcgagctttccagatccatcgccaacaaa
atcaaagacaaacagggggacatcactgaggatgagactatccgcttcaaatcatatttg
ttgagcatgggcatcgccaaccccgtaaccagggaaacgcacggctcaggcacgcattac
cacatgcagcttgctaaacagctgggagacatgttgcaggcaccactggaggaacgaggg
ggtatgatggccctcacggaggtctactgtttggtgaatcgagcacgagggatggagctt
ctttctcctgaggacatggtcaatgcctgcaagttgtttgaatctctgaaactccctctc
aggttgcgagtgtttgacagtggcgtaatggtggttcagcttcaatctcacagtgaagaa
gagatgattgcatctgctattgataatgtgtctgagaagggctccttaacagcagaggag
tttgctaaacttttaggactgtctgttcttcttgcaaaagagaggctgctgcttgctgag
aaaatggggcatctatgcagagacgactctgtggaaggcctgcgtttttatcccaacttg
ttctga
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