Neoarius graeffei (lesser salmon catfish): 132873747
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Entry
132873747 CDS
T10798
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132873747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132873747
03012 Translation factors [BR:
ngra03012
]
132873747
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132873747
Translation factors [BR:
ngra03012
]
Eukaryotic type
Release factors
132873747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
132873747
NCBI-ProteinID:
XP_060765537
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Position
25:3025751..3039760
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AA seq
443 aa
AA seq
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MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIMTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDSRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVDDTLKALEMGAVEILIVYENLDTMRYVLRCHGAEGSGPENDEKTLYLTPEQEKDK
SHFTDKETGQEHELLESMPLLEWFANSYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMDYQGEDEDLYDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacccgagcgccgcggacaggaacgtggaaatctggaagattaagaagttg
atcaaaagccttgaagcagccagagggaatggcaccagtatgatttccctcatcatcccc
ccgaaggaccagatctcccgggtggctaaaatgctggcagacgagtttgggacggcgtcc
aacattaagagcagagtgaacagactgtctgtgctgggagccatcacttcagtccagcag
agactcaagctctacaacaaggtgccccccaatggcctggtggtgtactgcggaaccatc
atgaccgaggagggcaaggagaagaaagtcaacatcgactttgagccgttcaagccgatc
aacacatcgctgtatttgtgcgacaacaagtttcacacggaggctcttactgcgttgctc
tcggacgacagtaagttcggttttatcgtgatcgacggcagcggcgccctcttcggaact
ctgcaaggcaacacgagggaggttctgcacaaattcacagtggacctgccaaaaaagcac
ggacgaggcggtcagtccgccctgcgattcgcccgcctcaggatggagaaaagacacaac
tacgtgaggaaggtggcggagacggccgtgcagctgttcgtctccaacgacaaggtcaac
gtcgccgggatggtcctcgccggatcggctgactttaaaacggagctcagccaatcagac
atgtttgactcgaggttacaagccaaggtgctgaaactggtggacatttcgtacggagga
gagaacgggttcaaccaggcgattgaactatcggccgaggtgctctccaacgtcaagttc
attcaggagaagaagctgatcgggcgctactttgatgagatcagtcaggacacggggaag
tactgtttcggagtcgatgatacgctcaaagcgctggagatgggagcggtggagattctc
atcgtctatgagaacctggacaccatgcgctatgtactacgctgccatggcgcagagggc
agtgggcctgaaaatgatgagaagacactatatttgacgccagagcaggagaaggataag
tctcacttcacagacaaagagacagggcaagaacacgaactcttagagagcatgccactg
ctcgagtggttcgccaacagctacaagaaattcggggcgacactggagatcgtgacggac
aaaagtcaggaaggctcgcagtttgtgaagggcttcggcgggatcgggggaattctgcga
tacagagtggatttccagggcatggactatcagggagaagacgaggacttgtacgacttg
gatgactactag
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