Neoarius graeffei (lesser salmon catfish): 132873977
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Entry
132873977 CDS
T10798
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132873977 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132873977 (lrrc4ca)
Cell adhesion molecules [BR:
ngra04515
]
Immunoglobulin superfamily
NGL family
132873977 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
DUF7617
Ig_6
Sp38
Podoplanin
DUF6821
Syndecan
DUF4293
Motif
Other DBs
NCBI-GeneID:
132873977
NCBI-ProteinID:
XP_060765805
LinkDB
All DBs
Position
2:77578736..77580679
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AA seq
647 aa
AA seq
DB search
MLNKMTFFLQQQMMRGPRWNRALSDPLFILLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLTPLVRLDELEMSGNQLSVIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCDCDILWLSWWLKEVVPANTSCCARCSTPASHKGRYIGELDQNYFHCYAPVIVEP
PTDLNVTEGMAAELKCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIEPSNDEGHTIVHQKVGPT
PSSGVWETSSLASSTTTTTTRMQVSTKATEKTYTIPVTALGDGSLNTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCMTAGPTMEGHLTLPPL
EHEHLNHYNTYKTTYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttcttcctacagcagcagatgatgagaggtcctaggtggaac
cgggccttgtctgacccattgtttatactgttgctggccttgcaattgcttgtggttgct
ggcttggtgagagcccagacttgtccatccgtctgctcttgcagtaatcagttcagtaag
gtcatttgtacacgtcgtggcctgcgagatgtaccagatggtatctctacaaacaccagg
tacttaaatctacaagagaatttaatccaagtgatcaaggtagatagcttcaagcattta
cggcacctggaaatcttgcagctcagcaagaaccatatccgtagtattgagattggagct
tttaatggattggccagcttaaacaccctggaactctttgataacaggctaactactata
cctaatggagcatttgagtatctatcaaagttaaaggagttatggctgcggaataatccc
attgagagcataccatcctatgccttcaaccgggtgccctcattaagaaggctggatttg
ggtgagctgaaaaggctctcatatatttcagaaggtgcttttgaaggcctaagcaatctg
cgttacctgaaccttggcatgtgtaatctaaaggaaatccctaatcttacacctctggta
cgtttagatgagctggagatgtcaggaaatcaactttcagttatacgaccaggttctttc
aaaggccttgtccacttgcagaaactgtggatgatgcatgctcagatccagacaattgaa
aggaatgcctttgatgatcttcagtcacttgtggaactgaatttggctcataataacctt
accctgctccctcatgacctcttcacaccgctgcatcatttggagagggtgcacttgcac
cacaacccatggaattgtgactgtgacattctctggcttagctggtggctcaaggaagta
gtaccagctaataccagctgttgtgctcgctgcagtacccctgctagccacaagggaagg
tacattggtgagttggatcaaaactatttccactgttatgcacctgtcattgtggagcca
ccaactgatttgaatgtgacagagggcatggcagcagaactaaaatgtcgggcaagttca
ctgacatcagtcagttggattacccccaatgggtcgatcatgacacatggagcatacaag
gtgcgcatttctgtgctaaatgatggaacattaaactttacaaatgttacaatgcaggac
acaggaacatatacatgtatggttagcaactcagcaggtaacaccactgcctctgctaca
ctaaatgtatcctcaacagagaacagcagtttcagctattttaccacagtgacggtagaa
acaattgagccatcaaatgatgaagggcacaccatagtacatcagaaagtgggtccaact
ccttcttctggagtatgggagacatcttccttagcttcatcaaccacaacaacaacaacc
cgaatgcaagtctccaccaaggccacagaaaaaacatacaccatcccagtcacagcactg
ggagatggctctctcaacaccctagatgaggtgatgaagaccactaagataatcattgga
tgctttgtggccatcacactaatggctgcagttatgctgattatcttctacaaaatgcgc
aaacagcatcatcagcagaatcaccatgcaccaacacgaaccattgagatcatcaatgtg
gatgaagactgcatgactgctggcccaactatggagggtcatctgactctgccacctctt
gagcatgagcatcttaaccactacaatacttataagacaacatataatcatgcatccacc
atcaactctatacacagctctgcacacgaacctttgcttattcgggccagctcaaaagac
aatgtacaagaaacccagatctga
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