Neoarius graeffei (lesser salmon catfish): 132874108
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Entry
132874108 CDS
T10798
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
132874108 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132874108 (nfasca)
Cell adhesion molecules [BR:
ngra04515
]
Immunoglobulin superfamily
L1 family
132874108 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
132874108
NCBI-ProteinID:
XP_060765994
LinkDB
All DBs
Position
26:complement(37590243..37897434)
Genome browser
AA seq
1371 aa
AA seq
DB search
MWPQGQWAPLAVLSIIVLLWKEVAPINVPPDPRIQQDLKQPPTIVNQSAKDYIVDPRDNI
IIECEAKGNPVPTFWWRRNGKFFNVEKDPRVSMKKRSGTLEISFRNSGKPEDYEGEYQCF
AMNDFGTAISKKILLRVSKAPLWPKEVLEPVVVNEGSSLVLACNPPPGLPPPKTFWMDSR
MMPILQDTRVSMGLNGDLYFSNVLAKDANTDYSCNARFLFTHTIQQKNPFILKVQTKEPY
NDTVYSSNDTYTYGARNIQESTPTFLSPSGMSSSKMVLRGEELLLECIAAGVPTPIIKWF
KKGGDLPERKVKFENFNKTLCIVPVSDEDSGDYICMASNKIGSIRHTISVQVKAAPFWLH
KPSNLVLAPNENGQLQCLASGNPKPSIQWLVNGEPIEGSLENPSREVVGDAIIFSSVQIG
TSAVYQCNASNEHGYLLANAFVNILDMAPRLLGPKNQLIKVIENKQAFLDCPFFGSPYPF
VRWFKNGQGIVPNGGKYSLHENGTLEIKQVRVEDQGTYTFVASNILGKAEDQVRLEVKEP
TRIVRAPEHLSANRGSVARFDCKIKHDSTLPITVTWLKNDKPLHFTWLSKFKKEEDSLSF
SNIQPDDEGTYTCTVTTELDHDSASARLTVLEDESLAPSKPSALADRPDPPQDLELSDLS
ARSVRLTWIPGNENNSPVTQFLVQYEEDRWRPGEWQNMSSYAGDQNSVNLNLSPFVNYQF
RVIAINNVGQSRPSQPSSRYQTSGAPPFLYPSGLKGWGTKKTNMEITWQPLHDNQRNGPN
LRYVVSWRRKDLEEEWNNITTSNTKHVVGDTDTYVPYEIKIQAVNDFGPGPESSVVIGYS
GEDRPTEAPRDLRVSKLNSNKVNVHWTPVETRSINGEFKEYRLYYWREASLVKDLKVNKE
KKIKSFFNDVSRNSGVLMELVPYSKYKMYMVVANNKFEGPHSITVEFQTKEGLPGAPKFF
KIVQRSSSTIRLEWNKPLEPNGILIGYTLQYKTVNGTQEGNVQVLSFFPNETEYTMRLPD
RFTRYKFSLSARTQVGSGEAYAEESPHFANEEDFMTSGTDPTGVAIDSTDAVVFATLLPP
FSLLTIPSATITTSTTTTIAPTTDAIPTTPAPTTATPTTTTTSTTTTTTTHPTLPFMLVP
HVKIWNLTVDANSDYANVSWKHNFTVDSSEFVLEFTLDSNGSMKSVLLKHEPPIKLAGLI
AGAKYRLRVYSHEQPSITSEYVSFETSGAYSTDQVDIATQGWFIGLMCALALLILILLIV
CFIKRSRGGKYPVRDKKDLPLDHVDHKDQDGSFDYHSDEDNKPLQGSQTSLDGNVKESDD
SLVDYGEGGDGQFNEDGSFIGQYTVRKDKEETEGNESSEATSPVNAIYSLA
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgcaggggcagtgggctcctctggctgtgctgtcaatcattgtgctgctgtgg
aaggaggtggctcccatcaatgtccctccagacccaaggatccagcaagacttgaaacag
ccccctactattgtgaaccagtcagcaaaggactatattgtggatccgagagataacatc
atcattgagtgtgaagccaagggcaatcctgtgccaacgttttggtggcgacgaaatggg
aagttcttcaatgtggagaaggatccccgtgtgtccatgaagaaacgctcaggtacattg
gagatcagcttcaggaatagcggaaagcctgaggactatgaaggagaataccagtgcttt
gctatgaatgactttggcactgctatatccaagaaaatactgctacgagtttccaaggca
ccactgtggcctaaagaggttttggagccagtggtagtaaatgagggatcatctttggtc
ctggcctgtaatccccctcctggccttcccccacctaaaacattctggatggacagtaga
atgatgccgatactgcaggacactcgagtgtccatgggtctgaatggagatctttacttc
tctaatgtgctcgctaaggatgctaacactgattacagctgcaatgcccgatttctcttc
acacacacaatccaacagaagaatccttttatcctcaaagtgcagacaaaggaaccttat
aatgacactgtatattcttcaaatgacacttacacatatggtgcacgtaatattcaagaa
tcaacacctacctttctctctccctcgggaatgtccagctctaagatggtgctccgtgga
gaggagcttctcctggagtgtatagctgctggagttcctactcctataatcaaatggttt
aagaaaggaggggatttgccagagagaaaggtcaaatttgagaacttcaataaaaccctg
tgtatagtgcctgtgtcggatgaggattctggagactacatctgcatggccagtaataag
ataggcagcatccgccacaccatctctgttcaggtcaaagctgctcctttttggctacat
aagccatctaaccttgtgttagctcccaatgagaatggtcagctgcagtgtttagccagt
ggaaaccccaaacccagcatccagtggctcgtaaatggagagccaatagagggttcactg
gaaaatccaagcagggaggtagttggtgatgcaatcattttcagctcagtgcaaattggc
accagtgctgtataccagtgcaatgcctcaaacgaacatggctacttgctggccaatgca
tttgtcaacatattggatatggcaccccggttattgggacccaagaaccagttgattaag
gtgatcgagaacaaacaagcctttctggattgtccattttttggctcaccttacccattt
gtgcggtggtttaagaatggccagggtatagttcctaatggtgggaagtatagcttgcat
gaaaatggtaccctggagatcaagcaagttcgagttgaagaccagggaacttacactttt
gtggcaagcaacatcctgggcaaagctgaagatcaggtccgtttggaagtcaaagagcca
acgcgaattgtccgtgctccagagcacctctctgccaatagaggaagtgtggctcgtttt
gattgcaagattaaacacgattccacactccccattactgtcacttggctcaaaaatgac
aagcccctgcattttacctggctgagcaagtttaagaaggaggaagactctctgtccttt
agcaacatccagcctgatgatgagggaacatacacttgcacagttactacagagttggat
cacgactctgcctcggctcgccttactgttttagaggatgaatccctagctccctcaaaa
cctagtgccttagcagatcgtcctgatcctccacaggatctggagctctctgatctatca
gcacgctctgtccggctcacctggatccctggcaatgagaacaacagtcctgttacacaa
ttccttgttcaatatgaagaggaccggtggagaccaggcgaatggcaaaatatgtccagt
tacgcaggtgatcagaactctgtgaacttgaatctgtctccatttgtgaactaccagttc
agagtgattgccatcaataatgtgggtcagagccgaccgagccagccatcatcccgctac
cagaccagtggagcacctccttttctttaccccagtggcctcaaagggtggggtaccaag
aaaaccaacatggagatcacttggcagcccctacatgataaccaaaggaatggacctaat
ctacgttatgtggtttcatggaggaggaaggacttggaggaggaatggaataacatcacc
acttccaatacaaagcatgtggttggtgatacagacacttatgtcccctatgagatcaag
atccaggcagttaatgactttggtccaggccctgagtcaagcgttgtcattggctattca
ggggaggacaggcctacagaggcacctagagacctcagggtgtcaaagttaaacagcaat
aaagtgaatgtacactggaccccagttgagaccagatccattaatggagaatttaaagag
tacaggctatattactggagggaggccagcctggtgaaagatttgaaggtcaacaaggag
aagaaaattaaaagtttcttcaacgatgtgtctcggaacagtggcgttctaatggaactc
gttccttacagcaaatacaagatgtatatggtggtggccaacaataaatttgagggacca
catagcatcactgtggagtttcagaccaaggaaggcttgccaggggctcctaagttcttc
aagattgtccagaggagcagcagcaccattcgcctagagtggaataaacctctagagccg
aatggcattctaatcggatacacactccaatacaagacagtgaatgggacacaggagggc
aatgtgcaggtcctgagtttcttccctaatgagacagagtacaccatgcgcctgcctgac
cgctttacccgatacaaattttccctgtctgctcggacgcaggtcggctctggcgaggcc
tatgctgaggaatcgcctcactttgccaatgaagaagactttatgacttcaggtactgac
cctacaggtgtagcaattgattctacagatgctgtggtgtttgcaactcttcttcccccc
ttttccctacttaccatcccaagtgcaaccattacaacctcaacaactactaccattgcc
cctacaacagatgccatccccactactcctgctccaactacagctactcctacaactacc
actaccagtactaccacgaccactacaacccaccccaccctgcctttcatgctggttccg
catgtaaagatctggaatctgaccgtggatgctaacagtgactatgctaacgtcagctgg
aagcacaacttcacggttgacagcagcgagtttgtgctagagttcacattggacagtaat
gggtctatgaaaagtgtgctgttaaaacatgaaccccccattaagctggctggattgata
gctggagctaaataccggctccgtgtgtattcccacgaacagcccagcatcaccagcgag
tatgtcagcttcgaaaccagcggagcctatagtacagaccaagtcgacattgccacacag
ggttggttcattggtctcatgtgtgcccttgcacttctcattctcatcctgctcattgtt
tgctttatcaagaggagccgaggagggaaatatccagtgagagataaaaaggacctgcct
ttggaccatgtggaccacaaagaccaggatggatcatttgattaccacagcgatgaggac
aacaagcctttgcagggaagtcagacctctctagatggcaatgtcaaggaaagtgacgac
agtctagtagactatggagagggaggagatggccagttcaatgaggatggctccttcata
ggtcaatacacagtcaggaaggataaggaggagacggaggggaatgagagctcagaggct
acatcacctgtcaatgccatctattctctggcgtag
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