Neoarius graeffei (lesser salmon catfish): 132874246
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Entry
132874246 CDS
T10798
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
ngra
Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03320
PPAR signaling pathway
ngra04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132874246 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
132874246 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132874246 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ngra03310
]
132874246 (pparg)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
132874246 (pparg)
Nuclear receptors [BR:
ngra03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
132874246 (pparg)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
PPARgamma_N
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
132874246
NCBI-ProteinID:
XP_060766241
LinkDB
All DBs
Position
26:23002323..23079920
Genome browser
AA seq
622 aa
AA seq
DB search
MHKINTRSQRHRNDLLNYYDSTALQTLHSFEAEPKKNCVQFPKQPFSEMVDTQTFSWPMG
FGLSALDLEGLDDSSHSLDMKPFSMINDYTPVSGIEYAPSPGQSEPTHMTDLTHMYNYRA
QENNYRAHENSYRLQENSYRAQENSYRAQESSYRAQESSYRAQESCYRPQESSYRAQESS
YRAHDIGYRPQESNYRTQEDNYKVHETQSSIKLEPESPPQYAEGSMTFTKQHEDPSTSAL
NIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHCALHCRIHKKSRNKCQYCRF
QKCLMVGMSHNAIRFGRMPQAEKEKLLAEVSSDLEHMHPEAADLRALAKHLYESYLKNFP
LTKAKARAILSGKTSDNAPFVIHDMKSLLEGEQFINCRQIPRQDHHRHLSVNSVQSDLQC
EVELRFFYSCQSRSAEAVSEVTEFAKTIPGFLNLDLNDQVTLLKYAVIEVLIIMMAPLMN
KDGTLISYGQIFMTREFLKSLRKPFSEMMEPKFEFSVKFNTLELDDSDMALFLAVIILSG
DRPGLLNMKPIEDLQENVLHSLELHLKMNHPDSVHLFAKVLQKMTDVRQIVSDHVRLMQL
LKESEIQMCLHPLLQEIMKDLY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaatcaacacacgctcacaaaggcataggaacgatctgctgaattactacgac
tcaacagcactccaaacattacactcttttgaagcagagccaaagaagaactgtgtgcag
tttcctaaacaacctttcagtgaaatggtggacacacagacgttttcctggcccatggga
tttggcctaagcgctctggacctagagggacttgatgacagctcacactctctggacatg
aagcctttctccatgatcaatgactatacacccgtctctggcattgagtacgcacctagc
ccgggccagagtgagccgacgcacatgacggatctgacacacatgtacaactacagagcc
caagagaacaactacagagctcatgagaacagctatagactgcaagagaacagctataga
gcacaggagaacagctacagagcacaagagagcagctacagagcgcaagaaagcagctac
agagcacaagagagctgctacagaccacaagaaagcagctatagggcacaagaaagcagc
tatagggcacatgatatcggctatagaccacaagagagcaactacagaactcaggaagac
aactacaaagtacatgaaactcaaagttccattaaacttgagcccgagtctccaccacag
tatgcagaaggcagcatgacgttcacaaaacaacacgaagatccttccacatcggcttta
aacattgagtgtcgagtgtgtggggacaaagcttctggattccactatggtgttcatgcc
tgtgagggatgcaaggggttctttcgccgtacaattcgcctaaagctagtctacgatcat
tgtgccctgcactgccgcatccacaagaaaagtcgcaacaagtgccagtactgtcgcttc
cagaagtgcctgatggtgggaatgtcgcataatgccattcgctttggccgcatgccccag
gcagagaaggagaagctcttggctgaggtttcttccgatctggagcacatgcacccggag
gcggctgacttaagggccctggccaagcatctttacgagagctatctgaagaacttccct
ttgaccaaagccaaggccagggccatcctctcagggaaaaccagtgacaatgctccgttc
gttatccatgatatgaagtctctgctagaaggggaacagttcataaactgtcgtcagatc
ccacggcaggaccatcataggcatctgagtgtgaactcggttcagtcagacctgcaatgt
gaggtggagctgcgattcttctacagctgccagtcacgctcagccgaggcagtcagcgag
gtcacagagtttgccaagaccatcccgggcttcctgaacctcgacctcaacgaccaggtt
acactgctcaagtatgcagtcattgaggtcctcatcatcatgatggcccctctcatgaac
aaggatggcacacttatctcatacggtcagatcttcatgacacgcgagttcctcaagagc
ctgcgcaagcccttcagtgaaatgatggagcccaagtttgaattttctgtcaagtttaac
acgctggagctcgacgacagcgacatggctctcttcttggccgtcattattctcagtgga
gatcgtccaggcctgctgaatatgaagcccattgaggatctacaggagaacgttctccac
tcactggagctccatcttaaaatgaaccacccggattccgtccatcttttcgccaaagtt
ctgcagaagatgactgacgtgaggcagattgtttccgatcacgttcgcttgatgcagttg
ctcaaagagtccgagatccaaatgtgtttacatccactgctgcaggagatcatgaaggac
ctgtactag
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