Neoarius graeffei (lesser salmon catfish): 132874280
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Entry
132874280 CDS
T10798
Symbol
cacna1sa
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1S subunit, a
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04010
MAPK signaling pathway
ngra04020
Calcium signaling pathway
ngra04260
Cardiac muscle contraction
ngra04261
Adrenergic signaling in cardiomyocytes
ngra04270
Vascular smooth muscle contraction
ngra04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132874280 (cacna1sa)
04020 Calcium signaling pathway
132874280 (cacna1sa)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
132874280 (cacna1sa)
09153 Circulatory system
04260 Cardiac muscle contraction
132874280 (cacna1sa)
04261 Adrenergic signaling in cardiomyocytes
132874280 (cacna1sa)
04270 Vascular smooth muscle contraction
132874280 (cacna1sa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ngra04040
]
132874280 (cacna1sa)
Ion channels [BR:
ngra04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
132874280 (cacna1sa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
132874280
NCBI-ProteinID:
XP_060766312
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Position
26:56599179..56653526
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AA seq
1780 aa
AA seq
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MEGGGEVPMSSYIMDEETLKRKQREKLKKLQATGGNPRPARSLLFLTLKNPFRKACISIV
EWKPFEIIILLTIFANCVALAVFMPMPEEDTNNTNSNLESLEYIFLIIFTLECFLKIVAY
GLLFHADAYLRNCWNILDFVIVTMGLFTIVVDFINNISGVEAPVEQKGGGFDMKALRAFR
VLRPLRLVSGVPSLQVVMSSILKSMLPLFHISLLVFFMVTIYAIIGLELFKCKMHKTCYY
KDTDIIATVENEKPSPCAEAGNGRRCALNGTVCKPGWPGPNNGITHFDNLGFSMLTVYQC
ITTQGWTDVLYWVNDAIGMEWPWLYFVTLILLGSFFILNMVLGVLCGEFTKEREKSSRSG
EYQKLRERQQLDEDLKGYMEWITHAEIMDLDQEGQGLLPLQERGLEMESLYELEGLNRLM
YYVRHARRWNRFFRRKCRILVKSKLFYWLVFLLVFFNTLVIATEHHQQSQSLTNFQESSN
KALLSLFAVEMVLKMYALGLPAYFMSLFNRFDCFVVSVGILELILVHMDVMSTMGISVMR
CIRLLRLIKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFALLGMQVFGGKFNFP
DQKIRRSNFDNFPQALITVFQILTGEDWNSVMYDGIMAHGGPVMPGILVSIYFIILFICG
NYILLNVFLAIAVDNLAEAESLTAAQKEKAEEKKRKKMLRSKGSDKGDEDKTLAKKLAEQ
RAKMEGIPTTARLKVDEFEFNVNEIKDPFPPADFPGDDEEEEPEIPTSPRPRPMADLQLK
ETVVPMPEASSFFIFGPQNKFRKLCHRIINATSFTNIILLFILLSSISLAAEDPIDPLSF
RNQVLTYADIVFTSVFTAEIVLKMTTYGAFLHKGSFCRNSFNILDLIVVGVSLLSMGMES
SAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLDFMFACIGV
QLFRGKFYACTDPLKMTEAECRGKFIYYQDNALHEMVIRKRKWINGDLNFDNVLNGMLAL
FTASTFEGWPKLLYKAIDSNMEDVGPVYNNRIGISIFFIIYLILIAFFMMNIFVGFVIVT
FQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYIVTSCYFEYLMFLL
IMLNTMCLGMQHCNQSEHITHLSDMLNVIFTVLFTIEMILKVGAFKAKGYFGDPWNVFDF
VIVVGSIVDVILSEINVALAAQGGLYCLTGCEEVNPMQEIADSENMSVSITLFRLFRVMR
LVKLLNRFEGIRNLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALIDGTVINR
NNNFQTFPQAVLLLFRCATGEAWQEVMLGCLYGQHCDPKSDYLPGEEFTCGSGFAVLYFM
SFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHLDV
VTLLRRIQPPLGFGKFCPHRVACKRLISMNMPLNSDGTVTFNATLFALVRTGLRIKTEGN
FQQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQEHFRKFIKRQEE
YYGYRPTKNKKTTNEIQAGLRSIEEEAAPELQRAISGDLMDEDEMDRVMDEVAEDAIYRR
AGGLFGNHVVPFSLQCGGAAHTQVVSQRPLQISDGRAQDSDTSPRVSAHTHNYTQYNYSH
NTHNNANTNNNSTQSELHFPACTSEEVQGPVSAAELLIQEVLEAGGVAHITDDRSFVRVV
KEETAAALHMDMQETERKVETMLDTCARRKATPLPRCSDD
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggagggtggaggtgaggttcccatgagctcatacatcatggatgaggagacgctgaag
aggaagcagagggagaaactgaagaagctccaggcaacaggaggaaaccctcgacctgct
cgctcgctcctcttcctcacgctgaagaacccgttccgcaaagcctgcatcagcatcgtg
gagtggaagccattcgagatcatcattcttctcaccatctttgcaaactgtgtggctctt
gctgtgttcatgccaatgcctgaggaggacacgaacaacaccaacagcaacctggagagt
ttggagtacatcttcctcatcatcttcacactggagtgtttcctgaagattgtggcgtac
ggactgctcttccacgctgacgcatatttacgaaactgctggaacattctggacttcgtc
atagtgacaatgggtcttttcactatagtggtggacttcattaataatatcagtggtgtt
gaggctccagtggaacagaaaggtggagggtttgatatgaaagctctcagagcatttagg
gtgctgaggccattacggcttgtctcaggagtcccgagcctgcaagtggtgatgagctcc
attctcaagtccatgctgccgctgtttcacatctcactgctcgtcttcttcatggtgacc
atctacgccatcatcggccttgagcttttcaaatgcaagatgcacaaaacctgctactac
aaggacacggatatcatagcgacggtggagaatgagaagccgtctccatgtgctgaggcg
ggaaacgggcggcgctgtgccctgaatgggacggtgtgtaaaccaggatggcctggtccc
aataacggcatcacacactttgataacctgggcttctccatgctcactgtgtatcagtgt
atcaccacgcagggctggacagacgtcctctactgggtgaatgatgcgattgggatggaa
tggccgtggctctactttgtcactctcattcttctgggatcatttttcatcttaaacatg
gtgctgggagtcctgtgtggtgaattcactaaggagcgggagaagagctctcggagtggt
gagtatcagaagttgcgtgaacgtcagcagctggatgaagatctgaagggttacatggag
tggatcactcacgctgagatcatggacctcgaccaggagggtcaaggtctgctgccgctg
caggagagaggtttggagatggagagcctgtacgagttggagggtctaaacagactcatg
tactatgtgcgtcatgctcgtcgctggaatcgtttcttccggaggaagtgccgtatcttg
gtgaaatccaagctcttctactggctcgtcttcctgctggtatttttcaacacgctggtc
attgccacagagcatcatcagcagtcccagtccctcaccaacttccaagagagttcgaat
aaagctctgctgtctctgtttgcggtggagatggtgctgaagatgtatgctctcggcctg
cctgcttacttcatgtctctctttaaccgtttcgactgtttcgtcgtgtctgtggggatt
ctggagctcatcttggtccacatggacgtcatgtccaccatgggcatctcagttatgcgc
tgtattcgcctgctgcgcctcatcaaagtcaccaagtactggacatctctcagtaacttg
gtggcgtctctgttgaactcagtgcgttccattgcgtctctgctcctcctcctcttcctc
tttatcgtcatcttcgctctgctcggtatgcaggtgttcggcggaaaattcaacttcccc
gaccagaaaataagacgaagcaactttgacaatttccctcaggcactcatcactgtcttc
cagatcctgacaggagaggactggaacagtgtgatgtatgatggtatcatggctcatgga
ggtcctgtgatgcctggcatcctcgtcagcatttactttatcatcctgttcatctgcggc
aactacatcctgttaaatgtcttcttggccattgcggtggataacctggctgaggccgag
agtctcaccgctgcccagaaggaaaaggccgaggaaaagaaacgtaaaaagatgctgaga
tctaaagggtctgataaaggagatgaagataaaacactggcgaagaaactggcagagcag
cgagcaaagatggagggaatcccaaccacggccaggctgaaggtggacgagtttgagttc
aatgtaaatgagattaaagaccctttcccaccagctgactttccgggtgacgatgaggag
gaggagcctgagatccccaccagcccgaggcctcgcccaatggctgatctgcagttgaag
gagacggtggtaccgatgcccgaagccagctccttcttcatctttggcccacagaacaag
ttccgtaaattgtgccaccgcatcatcaacgctacatcatttaccaacatcatcctcctc
ttcatccttctgagcagcatctcactggcagctgaggaccccatcgacccgctgtccttc
agaaaccaggtcttaacgtatgcagacatcgtcttcacttctgtcttcacggctgagatt
gtgctgaagatgacaacgtacggcgctttcttacataaaggctccttctgcaggaactcc
ttcaacatcctggacctgatcgtagtcggagtctcactgctctccatggggatggaatcc
agtgccatctctgtagtgaagatcctgcgagtgctgagagtcctgagacctttacgagcc
ataaacagagcaaaaggactcaagcatgtggttcagtgtgtgtttgtggccattaagacg
attgggaacattgtgctggtcaccatgctgctggatttcatgttcgcctgcatcggagtt
cagctgttcaggggtaaattttacgcctgcacagatccactcaagatgacggaagcagag
tgcagggggaaatttatctattaccaggacaacgctctgcacgagatggtgatccgtaag
aggaagtggattaacggtgacttaaactttgacaacgtgctgaacggcatgctggcactt
ttcacggcctccacttttgagggctggccaaagctgctgtacaaagccatcgattccaac
atggaggacgttggccctgtgtacaataaccgcattgggatctccatcttctttatcatt
tatctcatcctcatcgccttcttcatgatgaacatttttgttggttttgtgatcgtcacc
ttccaggagcagggggagcaggagtacaagaactgtgagctggacaagaaccagcgccaa
tgtgtgcagtatgctctgaaggcccgcccactccgatgttacattcccaaaaacccatat
cagtatcaggtgtggtacatcgtgacctcctgctactttgagtacctcatgttcctcctc
atcatgctgaacaccatgtgcctggggatgcagcactgcaatcagtcggaacacatcact
cacctgtctgacatgctgaacgtgatcttcactgtgcttttcaccatcgagatgatcctt
aaagttggagccttcaaagccaagggttattttggagacccatggaacgtttttgacttt
gtcattgtagttggcagcatcgttgacgtcattttgagtgagattaatgtggccctggct
gcacagggaggtctgtactgcctgaccggctgtgaggaagtgaacccgatgcaggagatt
gcagactctgagaacatgagtgtctccatcacactgttccgtctgttccgtgtgatgcgc
ctggtgaagctactgaatcgatttgagggaattcgaaacctgctgtggaccttcatcaag
tccttccaggctctaccatatgtggctctgctcatcgtcatgctcttcttcatctatgct
gtcataggcatgcaggtgtttgggaagattgcgctgattgatggaacagtgattaatcgc
aataataatttccagacgtttccgcaggccgtgctgctgctcttcagatgtgctacaggt
gaggcgtggcaggaagtgatgttgggatgtttatacggtcagcactgtgaccccaaatca
gattacctgccaggggaggagttcacctgcggctcgggattcgctgtcctctacttcatg
agcttctacatgctgtgtgcttttctgatcattaacctgtttgtggccgtcatcatggat
aactttgattatctgacacgtgattggtcaatccttgggccgcatcatctggatgaattt
aagaagatctgggcagagtacgaccctgaagccacggggcgtattaaacacctggatgtc
gtaactctgttgaggagaattcagcctccactgggctttggcaagttctgtcctcaccgt
gtcgcctgcaagaggctgatctccatgaacatgccattaaacagtgatggcactgtgact
tttaatgccacactgtttgctcttgtacgcacaggactgcgcatcaaaacagagggaaat
ttccagcaggcgaatgaggagctgcgagcaatcattaagaaaatctggaagaggacaagc
atgaagctgctggaccaagtcattccacccatcggagatgatgaggtgacagtagggaag
ttctatgctacattcctgatccaggagcatttcaggaagtttataaagcgtcaggaagaa
tattacggctacagaccgaccaagaataaaaaaaccaccaatgaaattcaggctgggttg
aggagtattgaggaagaggcggctcccgagctgcagagagcgatttctggggacctgatg
gacgaagatgagatggacagggtgatggacgaagtggctgaagacgcaatttacaggcgt
gcaggagggctgtttgggaatcacgtggtcccgttctccctgcagtgtggaggagctgca
cacactcaggttgtgagtcagcgccctctacagatcagtgacggcagagcgcaggacagt
gacacgtcaccccgagtctccgcccacacacataactacacacaatacaactactcacac
aacacacacaataacgccaacacaaacaacaacagcacacaaagtgaactccatttccca
gcatgcaccagtgaggaagtgcagggcccagtgagtgctgctgagctgctcatccaggag
gtgttggaggcaggaggcgtggctcatatcactgatgatcgcagttttgttagggtggtg
aaggaggaaacggctgcagcactgcacatggacatgcaagaaacggagagaaaagtagag
actatgttggacacgtgtgcaaggagaaaagccacgccccttcccaggtgctcagatgac
taa
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