Neoarius graeffei (lesser salmon catfish): 132874434
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Entry
132874434 CDS
T10798
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132874434 (traip)
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132874434 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Sec3_CC
zf-C3HC4_4
zf-RING_Vps41
Crescentin
GAS
HIP1_clath_bdg
zf-RING_11
Zn_ribbon_8
zf-RING_16
DUF2968
MAD
KxDL
HAD_SAK_1
zf_RING_Vps8
zf-RING-like
TSNAXIP1_N
ATG14
RINGv
RING_XB3-XBAT31
Fez1
FANCL_C
USP8_interact
BRISC_FAM175B_helical
zf-Nse
EXOC6_Sec15_N
OVT1
Prok-RING_1
UPF0547
Motif
Other DBs
NCBI-GeneID:
132874434
NCBI-ProteinID:
XP_060766595
LinkDB
All DBs
Position
26:53451271..53459738
Genome browser
AA seq
454 aa
AA seq
DB search
MPIRAYCTICSDFFDHSSDVAAIHCGHTFHAACLLQWFQSAPTKTCPQCRKQVSTRHIIS
KLFFDVAPDEEGSAADPESLQNELARMKVMLCEKERDWRDKQKAAEALKETIEKQRADLD
RVRRELGEKEMLCTALRKQMQYLESQQRESEAAREEAKRLRVKMKTYESLDVVLQGQRAE
VEAMISDMGAGQSAVEQLSIYCISLKKEYDSLKGSFQTSTEMCEKLKRELLSSNNKLQKV
TVEMNRAKEDMKALQNDLNNSDKEITSLKKKVEILQKTLSTPTRTNEAISRLVFESPAPV
ELKTPRLHQPLDSQDIDLNMTFDISTPEQVEKKPVAVPSKKMRLYPAEASSKHCENTSRS
QISHLKNSEVAMEPMFRNSLLFRKKMFGSMLDPHSKPGAVRTGYDGLGGRTKFIQPSPLA
EIRPLVMKAKRKKVSRPAPSKLTPNLATLDGFLE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgagcttactgcaccatctgctctgatttctttgaccactccagtgatgta
gcagcgatccactgtggtcacaccttccacgcggcatgtcttcttcagtggttccagtca
gctcccacgaagacctgtccccagtgcaggaagcaggtcagcacgagacacatcatcagc
aagctgttcttcgatgtagcaccagacgaagagggatccgcagccgaccccgagagctta
cagaacgagttggccagaatgaaagtcatgttatgtgaaaaagagagagactggagagac
aaacagaaagcagccgaggctctgaaggagacgatcgagaagcagagagccgacctggac
cgagtgaggagagagctcggagagaaggagatgctgtgtactgcactgagaaagcagatg
cagtatttggagagtcagcagagagaaagcgaggcggccagagaggaggcaaagaggctg
cgggtcaaaatgaaaacctacgaaagcctggacgtggtgctgcagggtcagagggccgag
gtggaggctatgatctcggacatgggggcggggcagtcggctgtggaacagctctccatc
tactgcatctctctcaaaaaagagtacgacagtctgaaaggcagtttccagacctccacc
gagatgtgtgagaagctgaagagggaactgttgtcctcgaataacaagttgcagaaagtc
acagttgagatgaaccgagcaaaggaggacatgaaggctctccagaacgacctcaacaac
tccgataaagagatcacgagtctgaagaaaaaagtggagatcctgcagaagaccctgagc
acccccacacgcaccaacgaagccatcagccgcctggtgttcgagagccccgcccctgtc
gagctcaagaccccgcgcctgcaccagcccttagacagccaggacatcgacctcaacatg
acctttgacatcagcacgcctgagcaggtggagaagaagcccgtggccgttccctcgaag
aagatgcgcctgtacccggccgaggcgtcgtccaaacactgcgagaacacgtccaggagt
cagatctcacacctgaaaaacagtgaggttgccatggagcccatgttcaggaactccctg
ctgttcaggaagaagatgttcggcagcatgctcgacccgcacagcaaacctggagctgta
agaacgggctacgatggactcggaggaaggaccaagttcatccagccgtccccgctggct
gagatccggccgcttgtcatgaaggcgaagaggaagaaagtatcgaggccagcgccgagc
aaactgacccccaacctcgccacactggacggattcctggagtga
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