Neoarius graeffei (lesser salmon catfish): 132874763
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Entry
132874763 CDS
T10798
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132874763 (irx3a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
132874763 (irx3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
Motif
Other DBs
NCBI-GeneID:
132874763
NCBI-ProteinID:
XP_060767142
LinkDB
All DBs
Position
27:46046495..46050415
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AA seq
470 aa
AA seq
DB search
MSFPQLGYQYIRPIYAQERQGIGSARSGSELSPSGTLSNVLSTMYGSPFTAAHTYGAFLP
YSNDLSIFSQLGAQYELKDGPGVQHPAFAHPHPAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRTDEE
GNVYGSDHEGEDGDKREDEEEIDLENIDTEHIESKDELDEQDELHSDSKLDASCDSEISD
GYEDLPGPEPKLLKAVAQEGKDARADADPERPDHFHHHHHHLHHHHHHHLPHSLDLKTQP
PPSSAQIKLNPVSNSPPAENNAAPVQKPKIWSLAETATSPDNPRKSPLVNGSSSQAVLPP
HRLVSCPVGKLQNWTSRAFSAHQLALLNSNHYLGLANQASANGLALYTGNRHTEERSGSS
ETAHTERSSALGAEKKSTQTSPMCLRPQDQPEAAMLLSPTPFPSFPSFPS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccacagttgggataccagtacatccgaccgatatatgcgcaagaacggcaa
gggatcggcagcgcgcgcagcgggagcgagctcagtccgtccggcacgctctccaatgtt
ctctccaccatgtacggatcacctttcaccgccgcgcacacctacggagcgtttctgcct
tattcaaacgacttgtccattttcagtcagttgggagctcagtatgaactaaaagacggt
ccaggtgtccagcacccagcgtttgctcatcctcaccctgctttctacccctatggtcag
taccagttcggagacccgtccagacccaaaaatgccaccagggagagcacaagcacgctg
aaggcctggctcagcgagcaccgcaagaacccgtatcctaccaagggtgagaagatcatg
ctggccatcatcaccaagatgaccctcacccaggtgtctacttggttcgccaacgcccgg
aggagactgaagaaggagaacaagatgacctggacgccgcgcaaccgcacagacgaagaa
ggcaacgtgtacggcagcgaccacgaaggtgaggacggcgacaagcgcgaggacgaggaa
gagatcgacttggagaacatcgacacggagcacatcgagagcaaggacgagctggacgag
caggacgagctccactcggactccaagctggacgccagctgtgactcggaaatctcggac
ggctatgaggatttacccgggcccgagccgaagcttttaaaagccgtggcccaagagggc
aaagacgcgcgcgcggatgcagaccctgagcgtcccgatcacttccaccaccaccatcac
cacctccatcaccaccatcaccatcaccttcctcattctttagacctcaaaacgcagcct
cctcccagcagcgcgcagatcaaactcaacccggtgtccaactctcctccggctgagaac
aacgcagccccggtgcaaaaacctaagatctggtctttggctgagacagccacgagcccg
gacaatccccggaaatccccactcgtcaacgggagctcatcccaggccgtcctgcctcct
catagactcgtttcatgcccggtgggcaaactgcagaactggacgagccgtgcgttctct
gcgcaccagcttgcgctcctcaactcaaaccactatttaggactggccaatcaggcttca
gccaacggccttgcgctctacaccggcaacaggcacacggaagagcgcagtggcagctca
gagactgcgcacacagagagatctagtgccttgggagcagagaaaaagtcaacacaaact
tcccccatgtgtctcaggcctcaggaccaacctgaagctgccatgttattatctccaacc
cccttcccttctttcccttcatttccctcataa
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