Neoarius graeffei (lesser salmon catfish): 132874911
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Entry
132874911 CDS
T10798
Symbol
capn8
Name
(RefSeq) calpain-8
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04141
Protein processing in endoplasmic reticulum
ngra04210
Apoptosis
ngra04217
Necroptosis
ngra04218
Cellular senescence
ngra04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132874911 (capn8)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
132874911 (capn8)
04217 Necroptosis
132874911 (capn8)
04218 Cellular senescence
132874911 (capn8)
09144 Cellular community - eukaryotes
04510 Focal adhesion
132874911 (capn8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ngra01002
]
132874911 (capn8)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
132874911 (capn8)
Peptidases and inhibitors [BR:
ngra01002
]
Cysteine peptidases
Family C2: calpain family
132874911 (capn8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
132874911
NCBI-ProteinID:
XP_060767389
LinkDB
All DBs
Position
27:10578640..10640515
Genome browser
AA seq
700 aa
AA seq
DB search
MSNIAHVLAKRKDKEEGLGGNDNAIPFNNQDFQKLRRECLESGKLFCDPTFPAEFRSLGY
NQLSRYSSKTIGVEWKRPSEVCPDPKFICDGATRTDICQGTLGDCWLLAAIASLTLDTQI
LGRVVPADQSFTEQYAGIFHFQLWQYGEWVDVVIDDRLPTRNGELLFVHSAKGNEFWSAL
LEKAYAKVNSSYEALSGGSTTEGFEDFTGGISESYELLKAPPTLFKIIRKALDRGSLLGS
SIDISSAAETEAITRQKLVKGHAYSVTGAEVVHVHGSPVQLVRLRNPWGQVEWTGAWSDG
SKEWDRVLPEEKAKLNYSAEDGEFWMAYSDFVKQYSKLEICNLTPDTLMSKGVARWSYHQ
FEGTWKVGCTAGGCRNNSATFCSNPQYMIKLDETDDDPHDGIDGCSFLVGLMQKDMRQER
QFGRDLNTIGFAIYKVPDEYQGRNNIHLGPNVLLRQRAVAMSDTFINLREVCCRFKLPPG
EYVIIPSTFEPHRKGSFILRVFAEKHANASPMETDISANIKEDKISEKDVDPHFQHLFKQ
VAGNDSEISALELQNILDRVVSQRTDLKTDGFSMETCRHIVSLLDRDGSGKLGLVEFHIV
WMKLQKYMEIFKIHDTDNSGTMSSHEIREALSDAGFQLNTPILEVIVMHYADKQSAIDFD
AFVGCIIRLELLFHIFKKFDKNNTGKIELDLLQWLCLALS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacatcgcccatgtgctggccaagaggaaggacaaagaggaaggactgggaggc
aatgacaatgccattcctttcaataaccaggattttcagaagctgcgacgtgagtgcttg
gagagtggcaaacttttctgcgaccccaccttccctgctgaattccgctctttaggatac
aaccagctaagccgatattcctccaagaccataggagtggaatggaaaaggccatcggag
gtttgcccagaccctaagttcatttgtgatggtgctacaaggactgacatctgccaggga
actctaggtgactgttggctcctggcagccatcgcctctttgactctggacactcagatt
ctaggacgggttgttcctgctgaccagagtttcactgaacagtatgctggcatctttcat
ttccagctttggcagtatggtgagtgggtggatgttgtcattgatgaccggctgcccaca
agaaatggggagctcctgtttgttcactcagccaaagggaatgagttctggagtgccctg
ctggagaaggcttatgctaaggtgaacagctcttatgaagctctttctggaggctccacc
actgagggctttgaggattttactggtggaatttccgagagttatgaactgctaaaagct
cccccgactctgttcaaaatcatcaggaaggcactggatcgtggatctctgcttggctcc
tccatagatatcagcagtgcagctgagacagaagcaataaccagacagaagctggtgaag
ggacatgcctactctgtcacgggagcagaagtggttcatgtgcatggcagcccagttcag
ctggtgcgtctgaggaatccatggggtcaagtggaatggaccggggcttggagtgatgga
tctaaagagtgggaccgagtgctgccagaagagaaggccaaactcaattactcagcagaa
gatggagagttctggatggcttattcagattttgtgaagcagtactccaagttggaaata
tgtaacttaacgcctgatacactgatgagcaaaggggttgcccgctggagctatcatcaa
tttgagggaacttggaaggttggctgtactgctggtggctgcagaaacaactcagcaacc
ttttgctcaaacccccagtacatgataaagctggatgagaccgatgatgacccccacgac
ggaatagatggctgctcgtttttggttggcctgatgcagaaagacatgcgccaagagagg
caatttggacgagacctcaacacaattggctttgctatctacaaggttcctgatgagtat
caaggtcgcaataacattcacctcggcccaaacgtcttgctgcgtcagagagctgtggcc
atgagtgacaccttcataaacctgcgtgaggtgtgctgccgtttcaaactgccacccggt
gaatatgtcattattccatctacgttcgagccacaccgcaagggttcctttatacttcgt
gtttttgctgagaaacacgccaatgccagcccaatggagacggacatcagtgctaatatt
aaagaggataagatctctgagaaagatgtggacccacatttccaacacctctttaagcaa
gttgctggaaatgattctgaaatttcagcgttagagctgcagaacattctggacagagtt
gtatctcagcgaactgacctgaaaactgatggcttctcaatggagacctgccgtcatatt
gtcagcctactggatagagatggcagtgggaaactcgggctggtggagtttcacatagtc
tggatgaagctacagaaatatatggagatcttcaagatccatgacacagacaactcgggc
accatgagctcccatgagatcagagaagctctcagcgacgcaggcttccagctgaacaca
cccatcctggaggtgattgttatgcactacgctgataagcaaagcgccatcgactttgat
gccttcgtaggctgcataatccgtctggagctgcttttccatatattcaaaaagttcgac
aagaacaatactgggaagattgagctggatcttctgcagtggctgtgcttggccctaagc
tga
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