Neoarius graeffei (lesser salmon catfish): 132874947
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Entry
132874947 CDS
T10798
Symbol
tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
132874947 (tp53bp1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
DUF4537
Motif
Other DBs
NCBI-GeneID:
132874947
NCBI-ProteinID:
XP_060767435
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All DBs
Position
27:31728178..31777509
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AA seq
1739 aa
AA seq
DB search
MDPGGSDLESSLPQTENPCLIVEDSQPDSVALEDDPDSSYRALLSRRLSNLQPTSHSPVL
ELIASPSKSRCTEADCQTEKSNRVIEADHLPSNLSSAAAEHSQVFEVCSLPDTKRSKQED
MESGADSTTHCAQTEEGISQFGLLELSESQGLNIEKQNIESGDEDVEGTPGNLQPADSQK
TTNQAGLKSSSGASDSQDDRFRRPEVSSSSALVPQRREGRELSVQAILHSQVSESVEDDD
EEMMSSQEDLFDGEKNGSKVDSTVAELENQEQQARTCTPAHSLRLLHLSGQGTLVQESLS
QQSVDFVAATQDNVSQTPLIIPSSPTGQENEQDFNKDAQPAKDTPGTPHDQAQKGQEEPM
DVDPVPKPTVSNIVSQNSPSFALEKNLSLPTQPEFSHDVFVPTPSLESGVGSQGPEASKK
KESPKESPSTILDAEAFKKPASSQPSQVATCFQLELDSENSVFEKKTQAFTTDDDSQATQ
IEEIQEPVGEDERDSVPARRVEKTDKSSPDCGLNKAVNLQGISQEPDLKTTENKECSSQK
LSLQSSKGQNGKINDSAAKSQESQCISNTVASQQMDEGGLGKDLTLSREQAGRPASTTPP
VPSQSKSQSVIISHKNPPGEEEQGGGSDQRPSQPISQSHRLDSTSNKDVDEEDEDGMDEG
EVQCTSRTEGSGFGLALSQSQINAPDPVEDGGEVAQPAGSKDEESLSVIVLEESERVSQE
QARVERSPVFRSSSQPVRGSPKEKFEPGRKVTGSQPNSSGQNLQVATRDGASNTQAGDGG
SQVQNVANKSLSDSSGDLPFHFTLPREGELIGPAASATPPHVRQLKNTPLHSTPIEMSTL
RERTEADVTRETTMAASEISVEESGEAEELAAQEGDGKLSLRMKVVTPVEEGSGSERFSL
QKPSLSDEEGSVSKAKAVTSPQSVFTRVREVHRQLQVEEEEKEPSDLSLRPQSQPILLNS
ESPNLSPEAVGNGTPEQLLQQANGTALHSEPLAEVQSSTANEHETPSTSGQEPRKSLTGQ
RAASQQTSMDLSSTTSPLNKRAVSQQTSFDASGPQFPSGRGESVTPTRSQSGPSHRRHVR
TIQEVRTTITRIITDVYYEDGREVDRKVVEESEEPVVDRCVMDSDVSPSRTGSSMTSGDL
ADVSSLSSKAASHFSSSGTSSGGPAPSRMAEFVMPPSRGAKIGSPRRGGRQAVGSELTGV
WASPSIAPMSPRGHGRRGRPPSRGPLSRGGRSAQRGGAHGPAASSSEDEHLTRTNARVPS
SHLDALNTTSPENSAGSGSSFVGLRVMAKWSSNSFFYSGTITRDLGENRFRLLFDDNQEC
EAQGKDILLCDPIPLETEVTALTEEEYFNTGIVKAHRRQGADLLYCVEKDGQSTWYSRTA
VILTMEQGNRLREPFGLGPYEPSTPQNMASDISLDNLVEGKRRRRGNGTGPGTPNSSATN
SPRTPAKRKLTSSTEDERTPAKRGRRGGGARSGLRMAPCDTSGSGAELPSEPDNLLVTHG
PLPESTSLFMGFVFMLTASSDNDRKSNQITSDGEEEYVQTAPYNKQYTERQLEAGGGMIL
PEFNEEQCKAAYQSLLIADKHCRTQTYLMCVAGGVPCVSQIWVRDCCQEKKLMNYRNYLL
PAGMGPEKRVIEWHARCNPFKALKVLLVSEDRVDLWTSLLTMCGAAKVQQHKISNNSSEI
SAEGLDLVVSASPCPAEVLKCVMATHTPLVSLEWLVQCVICGERLAYNSQPEYHHDYSS
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggtggaagtgatctggagtctagtctgcctcagactgagaatccctgcctt
atcgtcgaagactcccagcctgacagcgtggccttggaggacgaccctgatagcagctac
cgtgccctgctctcccgtcgcctctccaacctccagcccacttcccacagcccggtgctg
gaattgattgcatccccttcgaaaagcagatgcactgaagctgactgccagactgaaaag
agtaaccgtgtgatagaggctgaccatctcccgtctaatctcagttcagcggctgcagag
catagtcaagtatttgaagtttgctcccttcctgatacaaaaagaagtaaacaagaggac
atggagtctggtgctgattccaccactcactgtgcacaaacagaagagggaatatctcaa
tttggtctcctcgagctgtcagagagtcagggattaaatatcgagaaacaaaatatagag
agtggtgatgaggatgtagaggggacacctggcaacctccagccagcagacagccagaaa
acaaccaaccaagctggattgaaaagttcttctggggcatcagacagtcaggatgacaga
tttagaaggccagaggtgagctccagtagtgccttggtgcctcagaggagagaaggcaga
gagctgagtgtccaggccatactccactctcaagtctcggagtctgtagaggatgacgat
gaggagatgatgtcatcccaggaggatttgtttgatggagagaagaatggctctaaggtt
gatagtacagtagcagagcttgaaaatcaggagcagcaggctcgaacgtgcactcctgct
cacagcctccgcctgctgcatctctccggccaaggaacgctggtgcaggagagcctgtcg
caacagtctgttgattttgtggcagccacccaggacaacgtaagtcaaacaccgctcatt
atccccagttcacctacaggacaggagaatgagcaagattttaataaggatgcacaacca
gcaaaggacacccctgggactcctcatgaccaagcacaaaaagggcaggaagaaccaatg
gatgtggatcctgtcccaaagcccacagtgtcaaacatagtgtcccagaattcccccagt
tttgccttggagaaaaacctgtccttgccaacacagcctgaattctcacatgatgttttt
gtgcctacgccatccttggaatctggggtcggcagtcaaggtccagaggcttcgaagaaa
aaggaatcgccaaaagaaagtccatctacaatactcgatgcagaagcattcaaaaaacct
gccagcagccagccttcacaagtggctacatgtttccagttagagctggacagtgaaaat
agtgtttttgaaaagaaaactcaagcattcactacggatgatgacagtcaggccacgcag
attgaggaaattcaggagcctgtaggagaggatgagcgagactctgtccctgcgcgccgc
gtagagaaaacggacaaaagcagcccggattgtggccttaacaaagctgttaatttacaa
gggatttcccaggagcctgacttgaaaactacagagaataaagaatgttcctctcaaaag
ctgtccttacagtcttcaaaggggcaaaacgggaaaataaatgacagcgcggcaaaatct
caggagagtcaatgcatttcaaacaccgtagcctcccagcagatggatgaagggggtttg
ggtaaagacctgaccttgagtagagaacaggccgggagacccgctagcacaactcctcct
gttccgtctcagtccaaatctcaatctgtcatcatctctcacaaaaatcccccaggtgaa
gaagaacaaggaggtggcagtgaccaaagaccgagccagcccatatctcaaagtcaccga
cttgacagtactagcaataaggatgtcgatgaggaagatgaggacggaatggatgaagga
gaggtccagtgcactagcaggaccgaaggctctggattcggccttgcgctttctcagagc
cagattaatgctccagatccggtggaggatggaggggaagtcgctcaacctgcaggcagc
aaggatgaggagagcctcagtgtcatagtcttggaggagagcgaaagagtctcccaggaa
caagcacgtgttgagaggtcaccggtgttcagaagttcctcacagcctgtcagagggtcc
ccgaaggagaaatttgagcctggcagaaaagtcacgggctcccaaccaaacagctctggc
cagaatttgcaggtggccactagagatggtgccagtaacacacaggctggtgatggagga
tcacaggtccagaacgtggccaacaaaagcctgagtgacagctcgggagatcttccattc
cacttcacacttcccagagaaggagagctgatcgggcctgcggcgagcgcaactcctcca
cacgtcagacagctaaagaacacgccactccacagcactcctatcgaaatgagtacgtta
cgtgaacggacagaggccgacgttaccagagagacaacaatggctgccagtgagatctca
gtcgaggagagcggagaggcagaggagctggcagcacaggagggtgatgggaaactgagt
ctcagaatgaaggtggtgacccctgtagaagagggctcaggatctgagcgtttcagccta
caaaagccgtcattatcagatgaggaaggctccgtttccaaggctaaggctgttaccagc
cctcaatctgtcttcactcgggttcgtgaggttcacaggcagctacaggtggaggaagaa
gagaaggagcccagcgatctgtcactcagacctcaaagtcaacccatcctcctgaacagc
gagagcccgaatctatctcctgaggcagttggtaatggtacaccagagcagttattacag
caggccaacggaactgccttgcactcagaacctctggctgaggtgcagtcctccacagct
aatgaacatgaaactcccagcacttctggacaggaacctcgcaagtcgctcacaggccag
agagcggcgtctcagcaaaccagcatggacttgtcctcgacgacaagtcctctcaacaaa
agagcagtatcgcagcagaccagctttgatgcctctggaccacagttcccatcaggcagg
ggggagtcagtcactccaacccgctcacagtcaggcccttctcaccgcagacacgtccgc
accattcaagaagtgcgcaccaccatcactcgcattattactgacgtgtactatgaagac
ggcagggaggtggaccgtaaggtcgttgaggagtctgaggaaccagtggtggatcgttgc
gtcatggacagcgatgtttctccatcacgtacaggaagctccatgacctcaggagacctg
gctgatgtgagctcgctttcgtccaaggctgcatctcacttcagctccagcgggaccagc
agtggaggtccagctcccagcaggatggctgaatttgtcatgcctcccagtcgtggagcc
aagattggcagccccaggcgagggggtagacaagcagtggggtcagagctaacaggtgtt
tgggcttctccgtccattgccccaatgagcccccgaggccacgggcgtcgaggaagaccc
ccctcacgtggtccactgtccagaggtggaagatcagcacagagaggaggtgctcatggc
ccggctgcgtcttcatcagaagatgagcacctcactcgtactaatgcccgcgtcccctcg
agccatttggacgcactgaacaccacgtcccctgagaacagtgcagggagcggcagcagc
ttcgtcggactgcgtgtgatggccaagtggtcgtccaattcgtttttctactcagggacc
atcactcgggacctgggagagaaccgcttccggctactgttcgatgacaatcaggagtgt
gaggcacaggggaaggacatcctgctgtgtgatcccattccactggagactgaggtcaca
gcgctgactgaagaggagtactttaacacaggtatagtgaaggcacataggcgtcaaggt
gccgatttgctgtactgcgtagagaaggatggtcagagcacatggtacagcaggactgca
gtgattctcaccatggagcagggtaaccgtctgagagaaccgtttggcctcgggccttac
gaaccctccactcctcagaacatggcatccgatatcagcctcgataaccttgtggaagga
aagcggaggcgtcgaggaaacgggactgggcctggaacaccaaacagcagcgctacaaac
agtccaagaaccccagcgaaacggaaacttacaagttccacggaggatgagagaacacca
gcaaagagaggacgcagagggggtggggccagatcgggtttgagaatggctccatgtgac
acctctgggagtggagctgagctaccttctgaacccgataacctactggtgacccacggt
cctcttcctgagagtacgtctctcttcatgggttttgtcttcatgctaactgcatcctct
gacaatgacaggaagtccaaccagattacaagcgatggagaggaagaatacgtgcaaacg
gctccatataacaagcagtacaccgagaggcagttagaggctggtggaggaatgatcctg
cctgaatttaatgaagaacagtgtaaagcagcgtatcagagcctgttgattgctgataag
cattgccgcacgcagacgtacctgatgtgtgtggcaggtggagttccctgtgtctctcag
atctgggtgcgagactgttgtcaagagaagaagctgatgaactacaggaactacctgctc
cctgctggaatggggcctgagaaacgagtcatcgaatggcatgctcgctgtaaccctttc
aaagctttgaaggtcctgctggtttcagaggatcgtgtggatttgtggacttccttgctc
accatgtgtggagctgcaaaggtccagcaacataaaataagcaacaacagttcggaaatt
tcagcagaggggttagacttggtggtgtctgcgtctccatgtcctgcagaggtgttgaag
tgtgtgatggccacacacactccactggtgtcactggagtggctggttcagtgtgtgatc
tgtggagaacgtctcgcctacaacagtcagcctgagtatcatcatgattactcttcttag
DBGET
integrated database retrieval system
