Neoarius graeffei (lesser salmon catfish): 132875054
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Entry
132875054 CDS
T10798
Symbol
irx5a
Name
(RefSeq) Iroquois homeobox protein 5a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132875054 (irx5a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
132875054 (irx5a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
MRP-S32
Motif
Other DBs
NCBI-GeneID:
132875054
NCBI-ProteinID:
XP_060767625
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All DBs
Position
27:complement(45454583..45458562)
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AA seq
455 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFSSASAA
YSSHLPYGADAAAAAATFTSYVSSPYDHTSGMAGSIGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTP
RNRSEDEEEDENIDLEKNDDDEPNKPIDKGDSTDTETDPKILHVGEAPCDRFHDDHHHGK
DSDPLLSDSDLKEVDERVDALVDPSKATTSSPSLVQRAHELGVHDRPPEVAHGASAVNHS
NATSVIHSPPSAPKPKLWSLAEIATSSDRCRGGGGGGGGGGDSGGTAQSALPAASAVSPS
RTSTQCALPGGAVLSRPLYYTSPFYAGYTNYGSFGHLHGSHGSVTSSAATHFNGISPSVL
NRAEALARESKARSQAQVDLCKDSPYELKKGMSNI
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccctcagggctacttgtatcaaccgtccgcctctttggcgctctactcgtgc
ccggcgtacagtacgagcgtgatctcgggcccgcgcaccgaagagctcggcagatcgtcg
tcaggctctgcattcgcaccctacgccggatccacggcgttcagcagcgcctcagctgcc
tacagctcgcatctgccctacggagcggacgccgcagccgccgccgccactttcacctcc
tacgtgagttccccgtatgatcacacgtcaggcatggctggctctatcggctatcacccg
tacgcagctccactgggttcatacccctacggtgaccctgcataccgtaagaacgcgacc
cgggacgccaccgcgacactgaaggcctggctcaacgagcaccgcaagaacccgtatccc
accaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaggtgtcc
acctggttcgccaacgcccggaggagactgaagaaggagaacaagatgacctggacgccg
cgcaacaggagtgaggacgaggaggaggacgagaacatcgacctggagaaaaacgacgac
gacgagccgaacaagcctattgacaagggagactcgacagatacagagacagatcccaaa
atcctgcacgtgggcgaggcgccttgcgacagatttcacgacgaccaccaccacggcaaa
gactcggaccctttgctcagcgactcggacttgaaggaggtggacgagcgcgtggacgca
ctcgtggacccgtccaaagccaccacgtcgtcgccgtcactcgtgcagcgggctcacgaa
ctcggcgtgcacgacaggccgccggaagtggcgcacggcgcctccgcggtcaatcacagc
aacgccacgtccgttatccactctcctccatccgcgcccaagcctaaactgtggtctctg
gcggaaatagcgacgtcctcggacaggtgcagaggaggtggaggaggaggaggcggtgga
ggagactcagggggcacagctcagagcgctctaccggcggccagcgccgtgtctccgagc
cggacctcgacgcagtgcgcgctcccgggcggcgccgtgctctcccggcctctctactac
acgtcgccgttttacgcgggctacacgaactacggctctttcggccacctgcacggcagc
cacggctccgtcacgagctcggcagcgacgcacttcaacggaataagcccgagcgtttta
aaccgagccgaggctcttgcccgagaaagcaaagcaaggagccaagcgcaggtagatctg
tgcaaagactctccttatgaactcaagaaaggtatgtccaacatttaa
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