Neoarius graeffei (lesser salmon catfish): 132875188
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Entry
132875188 CDS
T10798
Symbol
cdh5
Name
(RefSeq) cadherin-5 isoform X1
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04514
Cell adhesion molecule (CAM) interaction
ngra04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
132875188 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
132875188 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132875188 (cdh5)
04090 CD molecules [BR:
ngra04090
]
132875188 (cdh5)
Cell adhesion molecules [BR:
ngra04515
]
Cadherins
Major cadherins
132875188 (cdh5)
CD molecules [BR:
ngra04090
]
Proteins
132875188 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_4
RibLong
VNG_1110C
CRIM1_C
DUF443
DUF1189
Motif
Other DBs
NCBI-GeneID:
132875188
NCBI-ProteinID:
XP_060767859
LinkDB
All DBs
Position
27:55553375..55575151
Genome browser
AA seq
778 aa
AA seq
DB search
MLNLEEFLTHSRKALEMMIHFVGKQAFRTFLWTAFLHFIFTTAEHVKDISPSSILQREKR
AWKWNMMLVYEEKQPSDPPEIIGRLKNTLFDENNVKFKLSGDGAGDIFILSKTGEVLVLK
KLDRETASSYTLKAEIIDIKSGRKLEDDTEFTIHVQDINDNGPVFSETYTGFVKERAEKG
TKVLTVNATDKDDPSTPHGLIMYELLNGTNFFSINNKTGEISTKVDTLDRETQSEYKLRV
KASDMFGVKNAAKQTADTVVTINIKDINDNVASFSKERYKFSVKEDEPAGFNIGRLDIND
RDEKQNKNATFTIDQSQTETFDVKLNDNNDGVLILKKKLDYETKPSYNFTIKLQEHVVQP
PDNTNLRSSAQILITVEDVDEPPVFTQTEYTFSVREGQKNIIVGTVSAKDTDKTSHRIRY
SISLSAWPVNINSETGQLTLKNALDREAKDVHEFLVTAEEESTSRLKSSAVVKINVLDIN
DNDPYLDKDKVYICESDESGTIIDVIGATDKDENPGKFHFTLKGKHSNFSLHDNLNNTVS
IILNHGGFSAKNPVEEHLDIEVIDGGNPPRKITRSLQLEVCVCGRERQKEYCVAYNRSGV
SVSAVIAILLCILTILVIVILFVLRKRYQKEVLAAVKKPSSEIHEQLVVYDEEGGGEMDT
NVYDVSILTSARSDTRLGPDPPPPAMYAVVKKPSACKGDMAVMIGVKKDEADHDRDGIPY
DTLHIYGYEGSESLAGSLSSLESSSSVTSDLDYDFLNDWGPRFRTLAQIYGSEGNTSY
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccttgaagagttcctgactcactccagaaaagcccttgagatgatgatacac
tttgttgggaagcaggcgttcaggacgtttctctggacagcgtttctacactttattttc
accacagctgaacatgttaaagacatttcaccatcgtccatcctgcagagagagaaacga
gcatggaagtggaacatgatgctcgtatacgaggagaaacagccgagcgatccgccggag
ataatcggcagactgaagaacactttgttcgatgaaaacaatgtaaagttcaagctctca
ggagacggagctggcgacatcttcatcctgagcaagacgggagaggtgctggtgttgaag
aagttggatcgagaaactgccagcagctacacactaaaagcagaaatcatagacattaag
agtggaaggaagcttgaagatgacacggaattcaccatccacgtccaggacattaacgat
aacggtcctgtgttctcagagacttacactgggtttgtaaaagaacgagcagaaaaagga
actaaggtgctgacggtgaacgcaactgataaagacgacccgtccacgccccacggcctc
atcatgtacgaactgctgaacggaaccaacttcttcagcattaataacaaaacgggtgaa
atttccactaaggttgacacactggatcgtgagactcagagtgagtataagctgagagtg
aaggcgtcggacatgttcggagtcaaaaatgcagcgaaacaaacagcggacactgtagtg
accatcaatataaaggacattaatgacaacgtggcctctttctcaaaagaacgctacaag
ttttctgtgaaagaggacgagccagcagggttcaatatcggaagactggacattaatgac
cgcgatgagaaacagaataaaaacgccacatttactattgatcaatctcagacagaaacc
tttgatgtgaagctgaacgacaataatgatggagttctcatactgaagaagaaactcgac
tatgagacgaagccgagctacaattttacaataaaacttcaagagcatgttgtccaacct
ccggacaataccaacctcaggagtagtgcacagatcctcatcaccgttgaagatgtggac
gagccgccagtcttcacccagacagagtacacctttagtgttcgcgaaggtcagaaaaat
atcattgtgggaacggtttcagccaaggacacagacaaaaccagccacaggatacggtac
agcataagtttgtctgcatggccagtgaacattaacagtgagacgggacagctcactctg
aagaacgctctggatcgagaagccaaagatgtccatgagttcctagttacagcagaggag
gaatcgacaagcagactgaaatcttctgcagtggtcaaaataaatgtcctggacatcaat
gacaacgacccgtacctggacaaggacaaagtgtacatctgcgagagcgatgaaagtgga
acgatcatcgatgttatcggtgccaccgacaaggacgagaatcctgggaaatttcatttc
actctcaaaggaaagcattcaaacttttcccttcatgacaatctgaataacacggtcagc
atcattctgaatcacggaggttttagtgcaaagaaccctgtggaggaacatctggatatc
gaagttattgacggaggaaatccaccacggaaaatcaccagatctcttcagctggaagtg
tgtgtgtgtgggagagagagacagaaggagtactgtgtcgcctacaacaggtctggagtc
agtgtgagcgctgttatcgccatcctgctctgcatcctcaccatcctcgtgatcgtaatt
ctcttcgtgctgcgtaaacgctaccagaaggaggtgctagccgctgtcaagaaaccatcc
agtgagattcatgagcagctcgtggtgtatgatgaagaaggtggaggagaaatggacacc
aacgtatacgacgtctccatcctgacctcagctcgctcagacacccgtctcggtcctgat
ccacctcctccggctatgtatgccgtcgtgaagaagccttcagcctgtaaaggtgacatg
gctgtgatgatcggggtgaagaaggacgaggctgatcacgaccgcgacggaattccctat
gacacgctgcacatttacggctacgaagggtccgagtcccttgccgggtcactgagctct
ctcgaatcatcttcttccgtcacatccgacctcgattatgactttctgaatgactgggga
ccccgattcaggacactggctcaaatttacggctctgaagggaacacttcctactga
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