| Entry |
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| Symbol |
acana
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| Name |
(RefSeq) aggrecan core protein isoform X1
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| KO |
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| Organism |
ngra Neoarius graeffei (lesser salmon catfish)
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| Brite |
KEGG Orthology (KO) [BR:ngra00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:ngra00535]
132875234 (acana)
00536 Glycosaminoglycan binding proteins [BR:ngra00536]
132875234 (acana)
04091 Lectins [BR:ngra04091]
132875234 (acana)
Proteoglycans [BR:ngra00535]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
132875234 (acana)
Glycosaminoglycan binding proteins [BR:ngra00536]
Hyaluronan
Extracellular matrix or blood plasma proteins
132875234 (acana)
Lectins [BR:ngra04091]
C-Type lectins
Lecticans
132875234 (acana)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
27:complement(34680214..34711203)
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| AA seq |
1539 aa
MTSFLLLCLCLRVISANWINSDYIYTEPERTLSVRIPIAQPPQPLMGDTVVLPCYFQDDT
VPDPGAPTIAPLSYRIKWSIVTQEKTTNILVAQKGIVAVNKKYTDRVQMVEYPTNTTDAT
IKITQLLSNESGVYRCEVMNGIEDSHASVNVQVQGIVFHYRAITSRYTLTFEKAQAACIQ
NNAVIATPVQLQAAYDTGYHQCDAGWLSDQTVRYPIHEPREACYGDKYELPGVRTYGVRE
VNETYDVYCFAEKMSGRVFYSTRPEKFTFAEAQAQCAKLDAKMATTGQLYLAWKDGMDEC
NAGWLADGSVRYPINIARPQCGGGLLGVRTVYRFINQTGYPPPESRYDAFCYTDKEEAGS
GIPSTFPDIQTTEATGEVVSVDMVTGGPPVLITQTFTGSEQRLGEIETHKPPSTTADILY
VEQGVTQPSLSSPPSITDEFVSMVTAQPDLGLEIPDENTTAHEISLTGVVFHYRLGHSRY
AFTFVEAQLACQNTGAVIASPQQLQAAYEAGYHQCDAGWLIDQTVRYPILSTREKCAGNL
ADLPGVRSYGVRPANEHYDVYCYMDKPRGNVFHVSSFEGFTYDEAVAYCQAQNASLASTA
DLYVAWKQGFDKCRAGWLIDHSVRYPINNPRPQCGGGKAGVHTVFKFPNQTDYPDVHSRF
DAYCLKADLQLNLYETESNMTLIEEELVNLTSRIDLFIPVNPTITPPIPMDLPGSGSADL
SSGVSGFSGDISASGSGEKSRGSSFKEEELSGSGLPSGSSGLGGELSGSGLPSGSSGLGG
GLSGSELPSGSSGLGGEISGSGLPSWSSGLGGELSEFGLPTGSSGLGGEILGSRLSSRYS
GLGRELSGSELSSESSGIGGDFSGSGLNEDISGSGLSGDDSGISVTFSRIDTIFSGGASA
SGTPQEAGEGSAEILTFISGLGSGFFSGDGSGSGSSSSFPSAESGLTSDLFSILGESGSG
ESSGISSGLGSSEEFSGFSGFPSGLISSGDDSGFSGLSGNGITMVKGQWVEVSTAPTLTA
QELGGSQMHFSEPGDLQGSGLSGSGDSGSCDLSGSGSGSGFPPITFLDSGLTDLINLSSS
EKEASGILMYGSGEGSGDFSGVSGLPSGDTSGASDSGDFISFTDESLVEISFRPIQNHEL
QKGPIELSGSESGPFLSSGHHHTTISSEDHHPTSLPSEDPVHSTDESIVLVPSGLLSNSA
QLQDILSNAAQTFWKYDSVTPTSMAGTTTSPVFSMPTPTVTDIPAMEKTAVDPCNPNPCG
AAVCSVQDGVSMCHCPPGVKEEECHFEVDVCHSNPCANGATCVEVQDAFKCLCLPSYGGD
RCEIDTETCKEGWTKFQGNCYLHFSERTVWEEAEQNCRNLGAHLVSITNPEEQAFVNSYV
ADYQWTGLNDKTFENDFQWTDGTPLQYENWRPNQPDSYFDSAEDCVVMIWHENGQWNDVP
CNYHLPFTCKTGPVTCGQPPELKNARWFGTKKERYQVNSVIRYQCNDGFRQRHQPVVRCM
ADGHWQKPRVECIPQIKRRQQKRSIRRQSGKRTSLRKHP |
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| NT seq |
4620 nt +upstreamnt +downstreamnt
atgacatcattcctgttactgtgtttgtgtcttcgggtaatctcagcaaactggatcaat
tcagattacatatatacagaaccagaaagaactctgagtgttaggattcccattgctcaa
cctccccagcccttaatgggagatacagtggttctgccctgctatttccaggatgacaca
gtgcctgacccgggtgctcccaccatagcacctttatcctatcgcatcaaatggagtatc
gttactcaagagaagaccacaaacattttagtggcccaaaagggtattgtggcggtgaat
aagaagtacacagacagggttcaaatggtagaataccccaccaacaccactgatgccacc
attaaaatcacacagcttctttcaaatgagtctggagtgtatcgctgtgaagtcatgaat
ggaatcgaagacagccatgcttctgtaaatgtacaggtgcaaggcattgtgttccattac
cgtgccattacttcacgttacacccttacatttgagaaggcacaggcagcctgtattcag
aataatgctgtgatcgccacaccagtgcagctacaggcagcgtatgatacagggtaccac
cagtgtgatgcaggctggctttctgaccagactgttaggtatcctatccatgaaccccga
gaggcctgctatggtgacaagtatgaattgccaggagtaagaacgtatggagtaagagaa
gtaaacgagacctatgatgtgtattgctttgccgagaagatgtcagggagggtgttctat
tcaacacgccctgaaaagttcacctttgctgaagctcaggcccagtgtgctaaactggat
gctaaaatggccacaactggccagctctacctggcctggaaggatggtatggatgaatgc
aatgcaggctggctggcagatgggagtgtccgctatcccatcaacattgctcgaccccag
tgtggaggaggtctgctgggagtgcgcactgtgtaccgtttcattaatcaaacaggctac
cctccaccagaatcaagatatgatgctttctgttacacagataaggaagaagcgggctca
ggcatacccagcacctttccagatatacagactacagaagctacaggtgaggtagtaagt
gtggatatggtaacaggtggcccaccagtgcttattacacagaccttcactgggagtgag
cagcgactaggagagattgaaacccacaaaccccccagcaccacagctgacatcctgtat
gtggagcagggtgtcacacagccatctctatcttcaccacccagtatcactgacgaattt
gtaagcatggtgactgcacagcctgaccttggattagagattcctgatgaaaatacaact
gctcatgagatatcccttactggtgtcgtcttccactacagactaggtcatagtcgctat
gcttttacctttgtggaggctcagctagcctgtcagaacactggtgcagtgattgctagt
cctcagcagttacaggctgcctatgaagctggttatcaccaatgtgatgcaggctggctg
attgaccagacagtgaggtatcctatcttatctacgcgagagaaatgtgctggtaatttg
gcagatttgcctggtgtgaggtcttatggtgtacgacctgccaatgagcactatgatgta
tactgctacatggacaaaccaagagggaatgtttttcatgtgagttcatttgagggtttc
acatatgatgaagcagtggcttattgccaggcccagaatgcctccttggcctccacagct
gatctgtatgtggcctggaagcaaggctttgataagtgtcgtgctggctggctcatcgac
cacagtgtccgctatcctattaataatcccaggcctcagtgtggaggagggaaagctgga
gtccatacagtttttaagtttcccaaccagactgactatcctgatgtgcactccagattt
gatgcctactgcttgaaagctgatctccaattaaatctttatgagactgaatcgaatatg
acacttattgaagaggaactagtgaacctgacctcaagaattgacctttttatacctgtg
aaccccaccattactcctcccattcccatggacctccctggttctggttcagcagacctg
tcatctggggtcagtggtttttctggtgatatatcagctagtggaagtggggagaagtct
agggggtcatcatttaaagaagaagaactttctggatctggactgccaagtgggtcatca
ggtttaggaggagaactttcaggatctggactgccaagtgggtcatcaggtttaggagga
ggactttcaggatctgaactgccaagtgggtcttcaggtttaggaggagaaatttcagga
tcaggactgccaagttggtcttcaggtttagggggagaactttcagaatttggactgcca
actgggtcttcaggtttaggaggagaaattttaggatctagactatcaagtaggtattca
ggtttaggaagagaactctcaggatctgaactgtcaagtgagtcatcaggtataggaggt
gacttttcaggatctgggctaaatgaagacatatctggttcaggccttagtggtgatgac
tcaggcataagtgtgaccttctcaagaattgacacaatattctctgggggtgcatcagct
tcaggaacacctcaggaagctggggagggcagtgcagagatcctcactttcatatcaggt
ctgggttctggcttcttcagtggagatgggtctggatcaggaagtagctcaagttttcct
tcagcagagagtgggttgacatcagacttattcagcatcttgggagaaagtggaagtgga
gaatcttctggcatttcttcaggtcttggttctagcgaggagttctctggattcagtggt
tttccatcaggcttgatttcctctggagatgacagtggtttctctggacttagtggcaat
ggaataaccatggtgaaaggccagtgggtggaagtgtccactgctccaacccttacagct
caggagctgggtggaagtcagatgcatttcagtgaacctggagatctacaagggtctggt
ttgagtggctctggtgatagtggaagttgtgatttaagtggctctggaagtggttcagga
tttcctcccatcacctttttggactcaggccttactgatctcataaacttatccagcagt
gaaaaagaggcctctggaattttgatgtatggatcaggggaagggagtggcgacttctct
ggagtttcaggtcttccgtcaggagacacatcaggggcatcagacagtggggattttata
tcatttactgatgagagcttggtggaaatttcttttagacccattcaaaaccatgagctc
caaaaaggaccaatagagctcagtgggagtgagagtggaccattcctgagcagtgggcac
caccatactactatttcaagtgaagaccaccatcccacatccctccctagtgaagaccca
gttcattcaactgatgagtcaatagttctagttccctcagggctgttaagtaacagtgca
cagctacaagatatcttatcaaatgctgctcaaaccttctggaaatatgactctgtgact
ccaacatctatggctggcaccactaccagccctgttttttcaatgccgaccccaactgtc
acagacatcccagccatggagaaaactgcagtggacccatgtaacccaaacccctgtggt
gctgctgtgtgttctgtgcaggacggggttagtatgtgtcactgcccacctggggtgaag
gaggaagagtgccattttgaggttgatgtgtgccattcaaacccttgtgccaatggagct
acgtgtgtggaggtacaggatgctttcaaatgcttatgcctgcccagctatggaggagat
cgctgtgagatcgacacagaaacatgtaaggagggctggactaagtttcagggtaactgt
tacctgcacttctcggagagaacagtgtgggaagaggctgaacaaaattgtcgaaacctt
ggagctcacctggtcagcattaccaacccagaagagcaagcattcgttaactcctatgta
gcggactaccagtggactggactaaatgataagacttttgagaacgacttccagtggaca
gatggaaccccattgcaatatgagaactggaggcctaaccagccagatagctatttcgac
tctgccgaggattgcgtggtgatgatctggcatgaaaacgggcaatggaatgatgtgcct
tgcaactatcatctaccattcacatgcaaaactggcccagtcacatgtggccaacctcct
gagctgaagaatgccaggtggtttgggactaaaaaggaacgctatcaggtcaactcagta
atcagatatcagtgcaatgatggcttcagacaacgccatcaacctgtggtccgctgcatg
gcagatggacactggcagaagccacgggtggaatgcataccccagatcaaaagaagacaa
cagaagagatccattaggcgtcaatctgggaagaggacatcattgaggaagcacccctaa |
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