Neoarius graeffei (lesser salmon catfish): 132875251
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Entry
132875251 CDS
T10798
Symbol
sin3ab
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ngra
Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
132875251 (sin3ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ngra03036
]
132875251 (sin3ab)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
132875251 (sin3ab)
REST complex
132875251 (sin3ab)
Heterochromatin formation proteins
Other heterochromatin formation proteins
132875251 (sin3ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
MKRN1_C
Motif
Other DBs
NCBI-GeneID:
132875251
NCBI-ProteinID:
XP_060767945
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All DBs
Position
27:35099880..35180959
Genome browser
AA seq
1267 aa
AA seq
DB search
MKRRSDDQETAFGSQRRLPGGTESFHHRVVAAASSVYGAASENMQSAAGVQYSQVPPTFQ
VPLAQTSGGHGHSDSPAVHAGAHHHGPVVQPTGATVGQGHSHAPPASAPTPGQQQFQRLK
VEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVINRVSQLFKGHPDLIMGF
NTFLPPGYKIEVQTNDMVNVTTPGQIHHITPHGVSVQNIPIAQQTPHQIQTSAPTSTAAL
PMPSQPTPAKISKPMQSPALTPTSQHNPSIPSYASPRSPSVQSHTPVSSTPASAPPLQNN
QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY
AQVARLFKNQEDLLSEFGQFLPDANSSVLLGKASTEKPESVRMDPSGVLKRPQLNNSKQR
FNQNGCQIRRHSGPGATPPLKKKPKFMGKEHPAAEGSKFGIGTESLFFEKVRKALRSSEA
YDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFTWFKNFLGYKECAQIESFPKERAT
EGIAMEIDYSSCKRLGFSYRALPKSFQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLETVQKKLSRMSAEEQAKFRLDNTMGG
SSEVIHRKAIQRIYGDKAADIIDGLKRNPAVSVPIVLKRLKIKDEEWREAQRGFNKIWRE
QNEKYYLKSLDHQGINFKQNDTKVFRSKTLLNEIETQYDERQEASEDNGSSPSGPHMTLP
YEDGQILEDAAALIIHHVKRQSSIHKDDKYKIKQVIYHFIPDMLFARRGELSDVEEEEEE
EEPDPDEDGAKKPNGTTQPKSKLLFSHTTPAQQKLSTCDEAYNLFYVNNNWYVFLRLHHM
LCTRLLRIYNQAEKQIEEETREREWERNVLGLKREKNDSPAVQLRLREPLDIDVEDYYSA
FLEMVRNLLDGNMETSQYEDQLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVT
DLYLNECSNKATGGTTSTQSSRAGAEASYQRKAEQLMAEENCFKLLFQKSKGSVQLAVEL
LDTEEENSDEPLEFERWPDYVDRYLNTDSTSPELREQLSQKPVFLPRNLRRIRKCQRGQH
VQMREASEAAKKTADGAEDPKMECMFKLNSYKMVYVIKSEDYMYRRTALSRAHQSHQQVS
TRLHQRFQTWLDAWRKNHVTNELATDNHRWLMGEGQEGLRACRTSCEPCILHFQTINRYR
VTYSSSP
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgctcggacgatcaggaaacagcgtttgggtctcagcggcggctccccgga
ggcacggaaagctttcatcaccgtgtcgttgctgctgcatcttctgtctacggggctgcc
tcagaaaacatgcagtctgctgctggtgtgcagtactctcaggtccctccgacttttcag
gtgccgttggctcagacctctggagggcatgggcacagcgacagtcctgcagtgcacgct
ggcgctcatcatcacggccccgtggtccagcctacaggcgccaccgtgggtcagggtcac
tctcatgccccgcctgcttctgctccaacaccaggccagcagcagttccagaggcttaag
gtggaagatgcactttcctaccttgatcaagtgaagctccagttcggaaatcagcctcaa
gtttacaacgacttcctggatataatgaaagaattcaaatctcagagcatcgatacacca
ggcgtgattaacagagtgtcacagctatttaagggccatccagacctcatcatgggcttt
aataccttcctgccccctggctacaagatagaagtgcagacgaacgacatggtgaatgta
acgactccaggccaaatccatcacatcacgccgcatggtgtttcagtgcagaacatcccc
attgcgcagcaaactccgcaccagatccagacttcagctcccaccagcaccgctgctctc
cccatgcccagccagcccacgcctgccaagatcagcaagcccatgcagtctccggctctg
accccaaccagccagcacaatccgtccatcccgtcgtacgcctcgccccgctccccctca
gtccagtctcacacgccggtgagcagcacgcctgccagcgcgcctccactgcagaacaac
cagcctgtggagttcaaccatgccatcaattatgtcaacaaaatcaaaaaccgctttcaa
ggccaaccagacatctacaaagcctttctggagattctgcacacgtaccagaaagagcag
cggaatgcaaaggaagccggtgggaactacactccggcactcacagagcaggaagtgtac
gctcaagtagccaggcttttcaagaaccaggaggatctgctctccgagtttggacagttc
ctaccggacgccaatagttctgtcttattgggcaaagcaagcaccgagaagcccgagtct
gtgcgcatggatcccagtggagtgttgaagaggcctcagctcaacaacagcaagcagaga
tttaaccagaatggctgccagattcgcagacactctgggcctggtgctactcccccctta
aagaagaagccaaagtttatggggaaagaacacccagcggctgaaggcagcaaattcgga
attggcactgaatctttgttttttgaaaaggtcaggaaagcactaagaagctccgaggcc
tatgacaatttcctgcgttgtttagtgatcttcaatcaagaagtgatctcacgggcagaa
ctagtgcagctggtgctacctttcttagggaaattccccgagctgtttacttggttcaaa
aactttctgggctacaaagagtgtgcccaaatagagagctttcccaaagagcgtgccaca
gagggcatcgctatggagattgattattcatcctgcaagagactgggtttcagttacaga
gctctgccgaagagcttccagcagcccaaatgcacagggaggactccactctgtaaggag
gttctgaacgacacgtgggtgtctttcccatcctggtctgaggactccacttttgtgagc
tccaaaaagacacaatatgaagagcacatctacagatgcgaggacgagcgctttgagctt
gatgtggttctcgagacaaacctggccactatccgtgttttggagaccgttcagaagaaa
ctttcgcgaatgtcagcagaagaacaggccaaattcaggttggacaacaccatgggaggc
tcctccgaggtcattcaccgcaaagccattcagaggatatacggggacaaagctgcagac
atcatcgacggtcttaagagaaaccctgcggtctctgtcccgattgtactcaaaagacta
aaaataaaagatgaagagtggcgcgaggctcaaagaggctttaataagatctggagggag
cagaatgagaagtattacctcaagtcattagaccaccagggtattaacttcaaacagaac
gacacgaaagtgttccgctccaagacattgctcaacgagatcgagactcagtatgatgag
cggcaggaggcatcagaagacaacggctcctctccgtcaggccctcacatgacactgcca
tatgaagacggtcagatcctggaggacgcagctgccctcatcatccaccacgtcaagagg
cagtccagcatccacaaggacgacaagtacaagatcaagcaggtcatctaccatttcatc
ccggacatgctgtttgcccggcgtggcgagctgtccgacgtggaggaggaggaagaagag
gaggagccagatcctgatgaagatggggcgaagaagcccaacggtacaactcagcccaaa
tccaagctgctgttcagccacacgacgccagcacagcagaagctgagcacttgcgatgag
gcctacaacctcttctacgtcaacaacaactggtacgtcttcctgcgactgcaccacatg
ctgtgcaccaggctgctgcgcatctacaaccaggctgagaaacagatcgaggaggagacc
agggagagggaatgggagcgcaatgtgctcgggctgaagagggagaagaacgacagtcca
gctgtccagctgcgcctcagggagcccttggacattgacgttgaggactactactccgcc
tttctggagatggtgcgcaatcttctggatgggaatatggaaacatctcagtatgaggac
cagctgagggagatgttcaccatccatgcttacatcgccttcaccatggacaagctcatc
cagagcatcgtcaggcagctccagcacatagtgagtgatgagatctgtgttcaggtgacg
gatctttacctcaatgagtgttccaataaagcgacaggtggaaccacatccactcagtca
tccagggccggcgccgaggcgagctaccagcgcaaagccgagcagctcatggcagaggag
aattgcttcaagctactgttccagaagagtaaggggagtgtacagctggctgtggagctg
ctggacaccgaggaggagaactctgatgaacccctggagtttgagcgttggccagattac
gtcgatcgctacctgaacacggactcgacgtcgccggagctgagggagcagctctcccag
aagcctgtgtttctgcccaggaacctcagacggatcaggaagtgccagcgagggcaacac
gtacagatgcgagaggcgagtgaagcagcgaagaaaaccgccgatggtgcggaggacccc
aaaatggaatgcatgtttaagctcaactcctacaagatggtgtacgttatcaagtcggag
gactacatgtacagacgcacggcactctcgagagcccaccagtcccaccagcaagtcagc
acaaggctgcaccagcgtttccagacatggctagacgcatggaggaagaatcacgtgacc
aacgagctggccaccgacaatcacaggtggctgatgggagaaggccaggaggggctgcgg
gcctgtaggacgagctgcgaaccttgcatccttcacttccagaccatcaacagataccgg
gtcacctacagcagcagtccttaa
DBGET
integrated database retrieval system
