Neoarius graeffei (lesser salmon catfish): 132875496
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Entry
132875496 CDS
T10798
Symbol
ungb
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132875496 (ungb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ngra03400
]
132875496 (ungb)
Enzymes [BR:
ngra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
132875496 (ungb)
DNA repair and recombination proteins [BR:
ngra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132875496 (ungb)
Prokaryotic type
132875496 (ungb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
132875496
NCBI-ProteinID:
XP_060768285
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Position
28:29395936..29427966
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AA seq
279 aa
AA seq
DB search
MSQEKIHSSSPQLTVEQLKQIEQKRHEAMKRLAARSDPMLIGESWRNHIGNEFAKPYFTE
LMSFIAEERKHFTVYPRKEQVFFWTHVCAFEAVKVVILGQDPYPRKGQAHGLCFSVLRPS
PPPPSLENIFTELAIDIKDFQHPGHGDLTGWAKQGVLLLNSVLTVRNREPTSHQGWGWEE
FTDAVVQSLSRSLKGLVFLLWGSYAQRKGKFIDRRSFDQTLTLKKKNSHSTMSLRQAIPH
HTLLIWAFLDADTSQRPTSYFKHLERHQLIGMHCDQSTF
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagaaaaaattcatagcagcagcccacagcttactgttgagcaactgaaacaa
atagagcagaagagacatgaagctatgaagaggcttgctgctcgcagtgatcccatgctc
attggagagagctggcgcaaccacattggaaatgaatttgccaaaccttacttcactgag
ctgatgtcttttattgctgaagaaaggaaacatttcaccgtctatccaagaaaagagcag
gtcttcttttggacacacgtgtgtgcatttgaggctgtgaaagtggtcatccttggccaa
gatccttatcccagaaaaggtcaggctcatggtctgtgcttcagtgtactgaggccttca
ccaccacctccaagtttggaaaatatattcactgaacttgcaatagatatcaaggatttc
caacaccctggccatggggacctgacaggatgggctaaacaaggtgttctgcttctgaac
tctgtcctgaccgtgagaaacagagaaccaacatcccaccagggctggggatgggaggag
ttcactgatgctgtggttcagagcctaagcaggagtttaaaaggtctggtcttcctgctg
tggggatcatatgctcagaggaaaggcaaattcattgatagaagatcatttgaccagaca
ttaacgttgaagaaaaaaaacagtcacagcaccatgtccttgagacaagccatccctcac
catactctgctcatatgggcttttttggatgcagacacttctcaaagaccaacatcttac
ttcaagcatctggaaagacaccagttgattggaatgcactgtgaccagagtactttttag
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