Neoarius graeffei (lesser salmon catfish): 132875597
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Entry
132875597 CDS
T10798
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04110
Cell cycle
Brite
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
132875597
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
132875597
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Ortholog
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GFIT
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NCBI-GeneID:
132875597
NCBI-ProteinID:
XP_060768473
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Position
28:50270278..50323846
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AA seq
1874 aa
AA seq
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MSAEVLRPEPRARGSRSGGSKLGLLINKLHTFLAVSAEQGSEHSLPGHWSGAMAKEFIEQ
QQAVARATEESMQPNVSSETKTSAARSRRKPLVVTKHSGLNESDASSGSGTEDVLSINSS
EPDTTCLPKGTVFVLPEPVSNEVRDEFRGPEFRSKRVKQNKDFSDKRRGGSDIERVNCTA
CGQQVNHFQRDSVYQHPALKVLICKSCFKYYMSDDISKDAEGMDEQCRWCAEGGSLIGCD
YCSNAFCKKCVLRNLGRRELSAILEEERKWYCYVCSPEPLMDLVLACDSVLQNLEKIWAR
KRAGVGGGARGKQRGGRGGAGIGFPLSSAPSRGLCERMQRVVEMTTSLNRSFVEFMQSER
DEEASEEEDADRARRLMMFRTILQDLHQAHAALQEALDRELYGGKREPPRQRAKPRQRKP
RAPRGSGVTKELVVKLTPVPLETSLNPDTNADASSAGDTAIDTAEVNTQMKEEEKQEKVE
KMEGRVDGKEESEEVKVEEECEGKGDAAMEEENTDEEDEGNELEMAEENKRSPRVKTTPR
RRRSDATHAGLEEDSDSDEVPAVLLQTAATAMATSEEEGGVDSDGGRSDANQEVRKQCLF
GLVKTTPPCQDRTSRKRKLKERSSSSSSSSSVAEVVDPGSQVRRTVGLGHKVAKTTVDSE
SLSSDQEMDSSDSDELDQKIKPLSDVTLMGCGTFQQSSGDEVDMCPAPVVLDEDDVENRI
AKQILLAEIRANYSSSSGQDDTSDDMRSTAEDEEGMMESKRKKGDEEKDDAKDSEVTDNS
SDLDDPAKAPQSRHHLLRLRLTPWESASGDDAGKPANQKMKMQKAEITNPIVVSSDERES
ASEESALSETLSQSEDEDGSIVKQKDSVVDGEPHTPPGKDGHSDADQNADECTSTPKGRR
KIRRILEVQQLAKETQEALREEQERRNRLAERDRQRRQEESREQGRDDSEVMIVAETPAP
RPVPLVLELDDATRESLVQVDTHLLSKLKPHQREGVQFIWDSCCESIAKVKSSPGSGCIL
AHCMGLGKTLQVITFLHTVLTCELVMLKTALVVCPLNTVLNWRAEFDKWQRGIIKKKMEV
MEFVTVKSVCSRVNALSSWHNRGGVMIMSYEMYRILTHGDQTKYGKQQENLRAALQNPGP
DIVVCDEGHVLKNEASAICKAMRSIRTRRRIVLTGTPLQNNLNEYHCMVSFVKQNLLGSL
REFRNRFINPIQNGQCADSTLSDVRLMKKRVHVLHELLAGCVQRRDYSALTPFLPPKREY
VLSVRMTTLQCKLYRHYLQNYTAEGVGVNTLFQDFQILSLIWTHPWCLQLSDQNRGNRGK
GEELTTETVVTSEHSEVAKQQSPDERAVEKSKDPNSAKTTAEEEHSVLSRPAAGWYREFV
CDADAELLEHSGKLMLLMEILHCAEQLQDKVLVFSQSLVSLDLIETFLELADKAKEEGKA
CVYKGKRSWVRDKDYYRLDGSTTATARKKWAQEFNNVRNTTCRLFLISTRAGSLGINLVA
ANRVVVFDASWNPMYDVQSMFRVYRFGQKKPVYIYRFLAQGTMEQKIYERQVAKQSLSSR
VVDQQQIQRHFTLSQLSDLYRFQPDSRGKSHTVEPADKVLAMLLKHCGRTIVSFHEHNSL
LDHRVEEELSMEERKEAWEEYKLEETKQTHTRVYIHTYTHCHPLCPFSVHFFPLTVRSQI
SSQDSGELSRKSNQELEVMLRKGRLDLQKASQNINRLSLEFFQQEVKKYHPLLDEEGIKQ
KATQAYQGFERDRQRRIEIYQRKLKSQQKLIRYTQQILAKRAEHSHRTPPTPVESRFQAG
ESSSATPTPQVQHSQSYGSFSQPSSSRVVRQTGLPVGAGLDLLTTTAEHQGDRWLKGRSD
NGTHAHASGSVGFS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgaggtgctgaggcctgaacccagggccaggggcagcaggagcggtgggagt
aaactgggactcctgattaataagctgcacacgtttctggcggtttctgcggagcagggc
agtgaacacagcttgcctgggcactggagcggcgcgatggccaaagagtttatcgagcag
cagcaagctgtagcacgagccaccgaagagagcatgcagcccaacgtctcctcagaaaca
aagacctctgcagctcgttccagaaggaagccgttggtggtgacgaagcacagcggcctg
aacgagtcggacgcgtcctctgggagcggaaccgaagacgtgttgtcgatcaactccagt
gaaccggacactacctgcctgccgaaaggtacggtgtttgtgttgccagagccggtgtca
aacgaagtccgtgatgagttcagaggcccagaatttcgcagcaaacgagtgaaacagaac
aaagacttctcagacaaacggagaggaggctctgacatcgaacgagtgaactgtacggct
tgtggtcagcaggtgaaccacttccagagagactcggtctaccagcaccctgcactcaaa
gtgctcatttgcaagtcatgttttaagtactacatgagtgatgacatcagcaaagatgca
gaggggatggacgagcagtgcagatggtgtgcggaaggaggcagtctgattggctgtgac
tactgcagcaacgctttctgcaagaagtgtgtgctgcggaacctcgggcggcgggagctg
tcggccatcttggaggaagagcgcaagtggtactgttatgtgtgcagcccggagccgctc
atggacctggtgctggcctgcgactcggtgctccagaacctggagaagatctgggctcgc
aaacgggcaggcgttgggggcggggcccgtgggaagcaaaggggtgggcggggcggggcc
gggatcggttttccgcttagttcggcgccctcaaggggtctgtgcgagcgaatgcagcgc
gtggtggaaatgacaacgtcgctgaaccgctcattcgtggagttcatgcagagcgagagg
gacgaggaggcgagcgaagaggaggacgcagaccgagcgaggagactaatgatgttccgc
accatcctgcaggacctgcaccaggcacacgctgccctgcaggaagcgctggatcgggag
ttgtacgggggcaaacgggagcctccgagacagcgtgcgaaacctcggcagcggaaacct
cgggctcccagaggctcgggtgtcacgaaggaactggtggtgaagctgacgcccgtcccg
ttagagacatctctaaatcctgacactaacgctgacgcgagctctgccggtgacaccgcc
atagacacagcagaagtaaatacacaaatgaaggaggaggagaaacaggaaaaggtggag
aaaatggaaggcagggttgatggaaaggaggaaagtgaagaggtaaaagtagaagaggag
tgtgaagggaaaggagatgcggcgatggaggaggaaaacacagacgaagaagatgaaggt
aatgagctggagatggcggaggaaaacaagcgctctcctcgcgtcaagacgaccccacgg
cgacggcgctcggacgccacgcacgccggcctggaggaagattcagattctgatgaagtg
cctgctgtgctgctgcagactgccgccactgccatggcaaccagcgaggaggagggtggg
gtcgatagtgatgggggcaggtctgatgcaaaccaagaagtcagaaagcagtgcctcttt
ggcctggtcaaaaccacgcccccttgccaagacagaacttcacgcaagcggaaacttaag
gagaggtcctcgtcttcatcctcctcttcttcggtcgcagaagtcgtggatcctgggtcg
caggtcaggaggactgtaggtcttggccacaaggttgccaagacaacggtggatagtgag
agtttgtcaagtgatcaggaaatggacagcagtgactcggacgagttggaccagaaaatt
aaaccgctgagtgacgttacactgatgggatgcggaacgttccagcagtcctctggtgat
gaggtggacatgtgccccgccccggttgtgctggatgaagatgatgtggagaatagaatt
gctaaacagatcctgttggctgagatcagggccaactactcgtccagctctgggcaggac
gacacgtccgacgacatgagatccacagccgaggatgaggagggcatgatggagagcaag
aggaagaaaggagatgaagagaaggacgacgctaaagacagtgaggtgactgataacagc
tccgacttggacgatcctgctaaagccccgcagtcccgtcaccacctgctgcgccttcgc
ctgaccccgtgggagtctgcgtctggagatgacgccggcaaacctgcaaatcaaaaaatg
aaaatgcaaaaagcagaaataaccaacccaatagtcgtgagtagtgacgagcgagagtcg
gccagtgaggagtcggcgttgagtgagacgctcagccaatcagaagacgaggatggcagc
atcgtgaagcagaaggattcagttgttgacggcgaacctcacacacctcctggaaaggat
ggtcattccgatgccgatcagaacgcagacgagtgcacgagcacaccgaagggccgcagg
aagatccggaggattctggaggtgcagcagctggcgaaggagacgcaggaggcgctgagg
gaggagcaggagagaaggaacaggctggccgagagagaccggcagcgaagacaggaggag
agcagagaacaaggacgagacgactcggaggtgatgatagtagctgagactcctgccccc
agacctgtccctctggtgctagaacttgatgatgcaacacgggaaagtctggttcaggtg
gatacacacctgctgagtaaactcaaacctcaccaacgagagggtgtgcagttcatttgg
gacagctgttgtgagtccatagcgaaggtgaaatcgtctcctggttccggttgcattctc
gcccactgcatgggcctcggaaagacgctgcaggtgatcacgtttctgcacacggtgttg
acgtgtgagctggtgatgctgaagacggcgctggtggtttgtcctctaaacacagtgctc
aactggagagccgagttcgacaaatggcagcgtggcatcatcaaaaagaaaatggaggtg
atggagtttgtgacggtgaagtccgtgtgttctcgtgtgaatgctctgagcagttggcac
aacagaggtggtgtgatgatcatgagttatgaaatgtaccgcattctcacacacggagat
caaaccaaatacggcaaacagcaggagaacctgcgtgcagcactgcagaacccgggaccc
gacatagtggtgtgtgacgaaggccatgtcctgaaaaatgaagcgtctgccatctgtaaa
gcaatgcgctccatccgcacgcgccggcgaatcgtcttgaccggaacaccgcttcagaac
aatctcaacgagtatcactgcatggtgagttttgtgaagcagaacctcttgggttctctg
cgcgagtttcggaaccgtttcatcaaccccatccagaacggccagtgtgccgactccacg
ctctccgatgtgagactgatgaagaaacgtgtgcacgtcctccacgagctcctcgctgga
tgtgttcagagacgggattattccgctctgacacctttcctgccacccaagcgagagtac
gtgctgtcagtcaggatgacaacactacagtgcaaactgtaccgacactacttacagaac
tacactgctgaaggagtgggcgtaaacactttatttcaggattttcagatcctgagcctg
atttggacgcatccatggtgcctgcagctctctgatcagaatagaggcaacaggggcaaa
ggggaggagcttacaactgaaactgtggtgactagtgaacattctgaagtggcaaaacag
cagagccccgatgaacgtgcggtggagaagagcaaagatcctaactcagccaaaacgaca
gcagaagaggagcacagtgtgttgagcagacccgcagcaggttggtacagagagtttgtg
tgtgacgccgacgctgagctcctggagcattctgggaaattaatgctgctgatggagatc
ctgcactgcgctgaacagctgcaggataaagtgttggtgtttagtcagtctcttgtttca
ctggacctgattgaaaccttcttggagttggctgataaagcaaaggaagagggaaaggcc
tgtgtgtataaagggaagcggtcgtgggtgcgtgataaggactattatcgtctggatggt
tcaaccaccgcaacagcacgcaagaaatgggctcaggagttcaacaacgtcagaaacaca
acctgcaggttgttcctgatctcgactcgagccggctctttagggattaatcttgtcgcg
gcgaatcgagtcgtggtgtttgacgcatcatggaatccgatgtatgacgttcagagcatg
tttagagtttatcgctttggccagaagaaacccgtgtacatctaccgcttcctagcacag
ggaacaatggagcagaagatctacgagcgtcaggtggcgaagcagtctctgtcatcccgt
gtggtggaccagcagcagatccagcgccacttcacactcagccaactgagcgacctgtac
cgcttccaacctgacagccgcggcaagagccacactgtggagcctgcggacaaggtgctg
gcgatgctcctgaagcactgtgggcgaaccatagtgtcgttccatgaacacaattcgctg
ttggatcacagggtggaggaggagcttagcatggaggaaaggaaggaggcgtgggaggag
tacaagctcgaggagacgaagcaaacacacacacgtgtatatatacatacatacacacac
tgccatcctctgtgtccattttctgttcatttttttcctctcactgttcgttcacagatc
tccagccaggattcaggtgagctgtcgaggaaaagcaaccaggagctggaggtgatgtta
aggaaaggacgtctggacctgcagaaagcttcacagaacatcaaccgcctaagtctggag
ttcttccagcaggaagtgaagaaatatcaccctctgctggatgaagagggaataaagcag
aaggccactcaggcttaccagggctttgaaagagacagacagcgcaggatcgagatttac
caacgcaagctcaagagtcagcaaaagctcattcggtacacgcagcagattctggctaaa
agggcggagcatagccacagaactcctcccacgccagtcgagtcaagatttcaagcgggt
gaatcttcctcagccacgcctactccacaggtccagcacagccaatcgtacggctctttc
tctcagccgtcatcatctcgagtcgtacgtcagacaggacttcctgtcggagctggtcta
gatcttctcacaacaactgcggagcaccagggtgacaggtggttaaaggggcggtctgat
aacggtacacacgctcacgccagcggttcagtcggtttttcctga
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