Neoarius graeffei (lesser salmon catfish): 132875737
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Entry
132875737 CDS
T10798
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132875737 (tbc1d8b)
Membrane trafficking [BR:
ngra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
132875737 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
132875737 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
EF-hand_8
OmpH
DUF2452
Motif
Other DBs
NCBI-GeneID:
132875737
NCBI-ProteinID:
XP_060768736
LinkDB
All DBs
Position
28:complement(53001630..53024834)
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AA seq
1147 aa
AA seq
DB search
MHHFLPVWQGFCRRGKRESTIHTRARALLKYVNAHTVTCEIHARADMWLKPEEVLLKNAL
KLWVTEKSNDYFILQRRRGHGDSSAGLTGLLVGTLDTVFDSTAKVAPYRILHQTPDSQVY
WNIACGASLDEISQHWDWLQLNIMRTLSVFDSGDDITSFVQGKIRGLIVEEDKVSAEDPE
RFREAALRFEHLFSLPKKEKLVTYFSCSYWKGRVPNQGWIYLSTNFLCFYSYLLGNEVKL
VFSWCEVSRLERSSSVLLTECIRVCVKEEDHFFSMFLRLQHTYELMQQLADYAITRMFDK
ETYNAQHPLRDPLHITQRSLEVHMRNQAFRSFFRLPRSENLCEVHECFLWLPFNHTHTLG
KICVSERYACFSSQDGNQCTVIIPLCEVVSVELPDRSSRALSVCVRCKRTFRFSEVRDLD
RLASTLRKCVTSLSPQHSHSAQLSLCEEEEEMMVGQVPAVSTEALMNVFHPHDAENLDPK
MLKERMKEQSWQIHFAEYGRGSAMFRTRKTRELITHGLPETLRGELWMLFSGAVNEMATH
PGYYASLVDESVCVSSSIACDEIERDLHRSLPEHPAFQSDRGISALRRVLTAYANHNPAI
GYCQAMNILASVLLLYASEEEAFWLLVSVCERMLPDYFNRRIIGALVDQAVFEEMMRDHL
TQLTDHMTELSFLSSLSLSWFLTLFISVLPIESSVSVLDCFFYDGIRFILQLALTVIHSN
MSRLLCCHDDAEAITALNRFFDGVVNKDSPLPATVQQATAAANHSTDQETVDISHLIKEA
YERFGDIRWEDVENMRKRNKLYVIHTLEETTKQNVLRVVAQDVKFNISQLEELYLLFKRQ
HFLSCYWSVCSPSLLNHDPSLPYLDQYQLDVDQFSSLFTLLLPWKHAHKHALVRSAFRLA
DNNGDGLINFKEFICLLDVLYNGSFTEKLKLLFKLHLQTEHADDGVIRKSPERARGKVDL
QEYLKQWQDELQKKEENIKDLPRIKQAEFVLLSKTLYNIFHGDQEEELLYRAVARVTSLL
LQMEEAGRKLQISPSGAYAQATPPTPQQAGSTSPQTPGSLSTDPFPSPETGSASSATSSP
TGTGSSAKTTPPGTPSPSDGGVDWSFSFEQILASLLNEPCVVTFFERTTDTHVLITHART
HQLTCVP
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacttccttccggtttggcagggtttctgtcgacgtgggaaaagggagtctaca
atacacacacgcgcgcgcgcacttctaaagtatgtgaacgcacacacagtgacatgcgag
atacacgcacgcgctgatatgtggctcaaaccggaagaggtgcttctgaaaaacgcactg
aaattatgggtgacggaaaagtccaacgattatttcatcctgcagcggaggagaggacac
ggagacagcagcgcaggactgacaggtctcctggttgggacgttggacacagtgtttgac
tccacagcaaaagtggctccatatcgcattttacaccaaacacctgattcacaggtgtac
tggaacatcgcttgtggagcatctctggatgagatctcacagcactgggattggttgcag
ctcaacatcatgagaactctctctgtgtttgactctggtgatgacatcaccagctttgtt
cagggcaagattagagggttaatcgtggaggaggataaggtgagtgctgaggaccctgag
cgtttccgagaggctgcgctacgattcgagcacttgttcagtttgcctaagaaggagaaa
ctagtgacctacttctcctgcagttactggaaaggccgtgtcccaaatcagggctggatc
tacctcagcactaacttcctgtgtttctactcctacttactgggcaatgaggtgaagttg
gtgttctcctggtgtgaggtgagcaggttggagcgctcctcgagtgtgttgttaacggag
tgtatccgtgtgtgtgtgaaagaggaggatcacttcttctccatgttcctgcggctgcag
cacacctacgagctcatgcagcagcttgctgactatgcaatcacgcgtatgttcgacaag
gagacgtacaacgcacaacacccgctcagagacccgctacacatcacccaaaggtctctg
gaggtgcacatgaggaatcaggcgttccgctcgttctttcgtcttccacgcagtgaaaat
ctgtgtgaagtgcatgagtgtttcctctggctgccgtttaaccatacacacacacttggg
aagatctgtgtgtccgagcgatatgcgtgcttctccagccaggatggaaaccagtgtact
gtcatcatcccactgtgtgaggtggtgagcgtggagcttccagaccgcagcagtcgtgca
ttgagtgtgtgtgtacgctgtaaacgaactttccgtttctcagaggttcgtgatttggac
cgtttggcctccacccttcgcaagtgtgtgacatcattgagtcctcaacattcccacagt
gctcagctctctctgtgtgaggaggaggaggagatgatggtgggtcaggttccagctgtc
agcactgaggctctgatgaacgttttccatccacatgatgctgaaaatctcgacccgaaa
atgttgaaagagcgaatgaaggaacagtcgtggcagatccattttgcagagtatggccga
ggcagtgccatgttccggaccaggaaaacccgagagctcatcacccatggacttccagaa
acactccgtggagaactgtggatgcttttctcaggtgcagtgaatgaaatggccacacac
cctgggtattatgcgtctctggtggatgaaagtgtgtgtgttagcagttcaatagcgtgt
gatgagattgagcgtgacctgcaccgctcacttcctgaacaccccgctttccagagcgac
cggggcatatctgcactccgcagagtgctaacggcatatgctaaccacaaccctgctatc
ggctactgtcaggcaatgaatatcctggcatcggtgttgttgctgtatgcgagtgaggag
gaggcgttctggctgctcgtgtctgtgtgtgagaggatgctgccggattacttcaaccgc
aggattattggtgccctggtggaccaggcagtgtttgaggagatgatgcgtgatcacctg
acccagctgacagatcacatgactgagctgtcattcctctcatcattgtcgttgtcatgg
tttctgacactcttcatcagtgtgttaccaatcgagagctccgtcagtgtgctcgactgc
ttcttctacgatggaatccgattcatcctccaacttgccctcactgtcatacacagcaac
atgtcccggctcctctgctgccatgacgacgctgaggccatcactgcccttaacaggttt
tttgatggtgtggtgaataaggacagtccacttccagccactgtacagcaggccactgca
gcagccaatcacagcacagatcaggaaactgtcgacatcagccacctcatcaaagaggcc
tacgagagatttggtgatattcggtgggaggatgtggagaacatgcgtaaacgcaacaaa
ctgtacgttattcacacacttgaagagacgacaaaacaaaatgttttacgagttgttgct
caggatgtgaagtttaatatctctcagctggaggagctgtacttactgtttaagaggcag
cacttcctcagctgttactggtcagtgtgcagtccatctctgctgaatcacgacccgagt
ctgccgtatctcgatcagtaccaactggacgtggaccagttcagttcactcttcacccta
ctgttaccatggaaacatgcacacaaacacgctctggtgcgctcagcgttccggctcgca
gacaacaacggagatggactcatcaacttcaaagagttcatatgcttgctggacgtcctc
tacaatggctcatttacagaaaagctcaagttactctttaagcttcatctccaaacagag
catgccgacgatggagtgataaggaaaagtccagaaagagctcgtgggaaggtggatctg
caggagtacctgaaacagtggcaggacgagttacagaagaaagaggagaacatcaaagac
ctgcctcgaattaaacaggccgagtttgtcctcctgtctaagactttgtacaacattttc
catggcgatcaggaggaggagcttctgtatcgtgccgttgcccgggtaactagcttgttg
ctgcaaatggaggaggcagggcgaaaactgcagatcagcccatcaggagcctatgcacag
gccacgcccccaacaccacaacaagcaggcagcacttcccctcagacacctgggtctctg
tccactgatcctttcccttctcctgaaacaggctccgcctcctcagctacaagcagcccg
acagggacaggcagctcagccaagaccacacccccaggtacaccctctccctcagatggg
ggtgttgattggagcttctcgtttgagcagattcttgcatcgttactgaatgaaccgtgt
gtcgtcacgttctttgagaggaccacagacacacacgtgctcattacacacgcgcgcaca
caccagctcacatgcgtgccctga
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integrated database retrieval system
