Neoarius graeffei (lesser salmon catfish): 132875747
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Entry
132875747 CDS
T10798
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
ngra04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132875747 (lamc3)
04518 Integrin signaling
132875747 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132875747 (lamc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
F5_F8_type_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-GeneID:
132875747
NCBI-ProteinID:
XP_060768753
LinkDB
All DBs
Position
28:complement(34342190..34916257)
Genome browser
AA seq
1644 aa
AA seq
DB search
MYSTTFSSVVSVLFLLFLSYSCVSAGMDSCQTEEGSPSVCMPKFENAAFNRTIIVSNVCG
SPPEDYCMQTGSTRSCRHCDASDLKRNHNATYLNDFNSDEEPTWWQSQSMFYGVQYPNSV
NLTLHLGKAYEITYVRLKFYTSRPESFAIYKRTNETASWQPYQYYSASCHKTYGKDSKGF
IRPGEEERTAFCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSPVLQEWVTATDLLISL
NRLNTFGDEFFKDANVLRSYFYAISDFSVGGRCKCNGHASECVPNEQGHLVCVCEHYTAG
TDCQNCAPFYRDRPWARATADSANQCIKCNCSGRADECVFDAEQYRSRGSGGRCIGCRDN
TAGPHCEWCRENFYRSSPLLPCNNCSCNTMGSVSLQCDEEGMCLCRPSVVGVKCDVCRPG
FHSFGPGGCRLCECDERGSVGMCSAGDGRCHCKSKVEGHSCDRCKPGSFNLQPDNPHGCQ
MCFCYGHSLACSSSSQHVAFNITSNFTEDTDGWLGEFSGHHEASLIWKEGEVYLLPYNGE
DVGYYKAPAKFLGNQLLSYGQHLILSFTAESSELLPKIVTVNLEGSRLSVSANMFSKQYL
DSEPSHTPHNIFMLRLTETEVNPPLTPFEFQHLLNNLTALHIGNVGGHNYTSQLSGVTLT
SATLAESYSDIPLAPPAPWVEVCTCPPGFMGQFCELCAPGFTRDSPNGGPYSTCVPCNCN
QHGMCHPETGVCDCKDFTTGASCERCGDGYYGNALTGSPGDCAPCPCPGRTTCAQVPETG
EVVCTSCPAGQRGIRCELCEDGFYGDPLGWRGEVQLCVRCECNENTDSNAVGVCDHVTGR
CLKCLGNTDGDQCEKCQSGYYGNALDRSLRPSQKCLPCVCNPAGTLGSVNECDTRTGRCL
CLRHVTGRDCGQCEFGYFNLRPGLGCDNCNCNLIGSSSPACHPITGQCMCQTGIEGKMCD
ACQMGFFGFSSRGCRACNCDPMGSVSMQCHTNGTCSCRQGFVGYKCDKCELNHYQNPLTH
QCEECPVCYSLIRDQATKLKSQLYSLERLLSKYDCKSFRHQIYVRPKHVLQHHRLENHLH
GHQGEDYLPNALEDFLTIQETREAFIRQFTQLETSAQALQLQLHDFASRMNCSLLKEEGS
TSSEEENSALKATNKCRALVDTFAAVTESQAQLQKMISDLNSLVIPFIIPKGQTEWNILV
NESEALMKSHKEMAAHIEGLAGEALKVSNKTYSILLDLLEDNSTEHHLQELTEQLLEMQR
LKETLTRQANETHAAYLSVEEQNKETEAILQNVTSTLPKQNKDINNISLNTTSAEQLSEA
DDTIIRNTQLIQTLDLTDRMAELDLLIQSKEQLLNKTRGELEPQLENARNNLNTTEEFQQ
LTALAQGLRETALTSVVEGKKIESEASSLQRHIKGLEKEWAVVRTQTRAALKREGIVKEK
ILTEVKKKVMHGKRALRPALENAIQARDAATQVQKTANSAAKDAKASLSQGKQKKKVSAQ
LNTAVNAAMQQLTEQENLAAQVAGDVQDEADVSLKRVIGSMESAKSQLEGFTHMLAKLLG
QIERNTDVEKYDRVLNETAARLQVLRGNVESPVLNRKFQILLGAAEAQQKQLMELEKNLQ
DIQGERDSLTDIAQNLPKTCPKRS
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgtattccactacattttcctctgtcgtctccgtactttttcttttattcctctcatat
tcgtgtgtttctgctgggatggactcttgccaaactgaggaaggttcaccaagtgtctgc
atgcctaaatttgagaatgcggctttcaaccgtaccataatcgtttcaaatgtgtgcggc
tctcctcctgaggactattgcatgcaaacgggttctacacgctcctgtcgccattgtgat
gcttcagacctcaagagaaaccacaatgccacctacctgaatgacttcaacagtgatgag
gagcctacctggtggcaaagccagtccatgttctatggagtgcagtaccccaactctgtt
aatctaacactacacttgggtaaagcctatgagatcacatatgtccggctaaagttctac
accagccgcccagagagttttgccatttacaaacgtacaaatgagacagcatcatggcag
ccataccagtactacagtgcatcctgccataagacctatgggaaggactccaagggcttc
atccgacctggagaggaggagagaacagcattctgtacagatgagtttagcgacatctct
ccattaacaggaggaaatgtagctttttctacccttgaaggaagacccagtgcctacaac
ttcgaccagagcccagtgctccaggaatgggtgacagctacagacctactgatctcgtta
aacagattgaacacctttggagatgagttcttcaaagatgccaatgtgctacgctcctac
ttttatgccatctctgacttttctgtggggggcagatgcaagtgtaatgggcatgcaagt
gagtgtgtgccaaatgagcaaggccatttagtgtgtgtatgtgagcactacactgctggg
acagattgccaaaactgtgccccattctaccgggaccggccatgggctcgtgccactgca
gactctgccaatcagtgtattaagtgtaactgcagtggccgtgcagacgagtgcgtgttc
gatgcagagcagtaccgcagtagaggtagcggtggacggtgcattggctgtagggacaac
acagcagggccgcattgtgaatggtgcagagaaaatttctacagatcatctccacttctt
ccctgcaacaactgcagctgtaacactatgggctctgtgagtttgcagtgtgatgaggaa
ggcatgtgtctctgcaggccgagtgtggtgggggtaaagtgtgatgtttgcaggcctgga
ttccactcctttggaccaggaggctgcaggttatgtgagtgtgatgaaaggggcagtgta
ggcatgtgttcagctggagatggaaggtgccattgcaaatccaaagtggaaggacattca
tgtgacaggtgcaaacctggctccttcaatctacaacccgacaatccacatggctgtcag
atgtgcttctgttatggccattcactagcatgttcatcctccagtcagcatgtggccttc
aacattacctccaacttcactgaagacactgatggctggcttggtgagttctcagggcat
catgaagcctccctgatatggaaagaaggagaagtctacctgctaccctataatggggag
gatgtcggctactacaaagcaccagcaaagtttctggggaaccaactgctaagttatggc
caacaccttatcttgtcatttacggctgaatcaagtgagctgctgcccaagattgtgact
gtgaatctcgaaggatctagactgtcagtcagtgccaacatgttttcaaagcagtatttg
gacagtgagcctagccacacaccccataacatcttcatgctcaggttaactgaaacagag
gtgaatccgccactcactccatttgagtttcaacatttgctcaacaacctgactgcacta
cacattggcaatgtgggaggacacaactatacctcccagctgtctggggtgacactgacg
tctgcaacactagctgagtcctattctgacatcccccttgcaccacctgccccctgggtt
gaggtgtgtacctgcccacctggattcatgggacaattttgtgagctgtgtgcaccaggt
tttacccgagatagtcctaatggcgggccatattcaacctgcgtgccatgtaactgtaac
cagcatgggatgtgccacccagaaacaggtgtttgtgactgcaaagacttcacaaccggt
gcctcttgtgagcgttgtggggatggttactatgggaacgcactgactggcagcccagga
gactgtgcgccctgcccctgcccaggccgtaccacttgtgcccaggtgccagagacaggg
gaggtggtatgtaccagttgcccagcaggacaaaggggaatcagatgtgagttatgtgag
gacggtttctacggtgacccacttggctggcgtggtgaggtgcagctgtgtgtaaggtgt
gagtgtaatgagaacacggactccaatgctgtaggtgtgtgcgaccacgtgactggacgc
tgcctcaaatgtttaggaaacacagatggggaccaatgtgaaaaatgtcaaagcggttac
tatggaaatgctctggataggagcctgaggccttcccaaaagtgtctgccctgtgtctgt
aaccctgctggcactttggggtcagtgaatgagtgtgatactcgcacaggaagatgtctg
tgcctgaggcatgtgacaggaagagactgtggacagtgtgagttcggctacttcaacctg
cggccagggctgggctgtgataactgtaactgtaatctcattggctcctcatccccagcg
tgccacccaatcacaggccagtgtatgtgccagacaggtattgagggcaaaatgtgtgat
gcctgtcaaatggggttttttggcttttcctccagaggctgcagagcctgtaattgtgac
ccaatgggatcagtgtccatgcagtgccacaccaatgggacatgttcgtgtcgccaaggt
tttgttggttataagtgtgataagtgtgagctgaaccactaccaaaaccccttgacacac
caatgtgaggagtgccctgtatgctacagtctcatcagagaccaggcaactaaactcaaa
agtcaactgtacagtttagagagattgctttccaagtatgactgcaagagcttcaggcat
caaatctatgtgcgtccaaaacatgtactccagcatcacaggctcgagaatcacttgcat
gggcatcaaggggaggattacttacccaatgctctggaggattttctcactatccaagag
acacgggaagctttcatccgccagttcacacagctggaaacatctgcacaagccctgcag
ctgcagctgcatgactttgccagtagaatgaactgcagcctcctgaaggaagaaggaagc
acaagcagtgaggaagagaacagtgcgctgaaggcaactaacaagtgtcgagctcttgtg
gacacatttgctgctgttacagaatcgcaggcacagcttcagaagatgatctcagacctt
aacagtttagtaatcccattcataatcccaaaaggacagacagagtggaacatccttgtg
aatgaatcagaagctttgatgaagagtcacaaagaaatggctgctcatatcgaagggcta
gctggagaggctttaaaagtgtctaataaaacttattccatactgctggatctactggag
gataactcaacagagcaccatttacaagagcttactgagcaactgttagagatgcagcgg
ctgaaggagactctaacacgacaggcaaatgagacccatgctgcctacctgtcagtggag
gagcagaacaaagaaacagaggccattttacaaaacgtcacctccactctccccaaacag
aacaaggacataaataacatctctctgaacacaacatctgcagagcagctcagtgaagca
gatgatacaataatacggaatacacagttgatccagactctagacctgaccgacaggatg
gctgagctggatttgctaatccagtccaaggaacagttgctaaataagaccagaggggag
ttggaaccacaactagaaaatgcacgcaacaatctaaacaccactgaagagttccagcag
ctgacggcacttgcccaggggctcagagagacagcccttacttctgtcgtggaaggaaag
aaaatagagtcagaggcatcctctctgcaaagacatataaaaggcttagagaaggagtgg
gctgttgtgcgtactcagacccgggcagctctgaagcgagagggcatagtgaaggagaag
atcctgacagaggtgaagaagaaggtgatgcatggtaagagagcactgagacctgcactg
gagaatgcgatacaagcaagagatgcagcaacgcaggtccagaagacagctaattccgca
gctaaggatgctaaagcatctttgtcacagggaaagcagaagaagaaggtgtctgcccaa
ctgaacacagctgtgaacgcagccatgcagcagttgacagagcaggaaaatttagctgct
caggtggcaggagatgtgcaagacgaggctgatgtttctttaaagagagtgataggcagc
atggaatcagccaagagccagctggagggtttcacgcacatgctagccaagctgcttggt
caaatagaaaggaacacagacgtggaaaagtatgaccgcgtgctgaatgagacagctgca
cgtctccaggttctccggggcaatgtggagagcccagtgctgaacaggaagttccagata
cttcttggagcagctgaagctcaacaaaaacaactcatggagcttgaaaagaatctgcag
gacatccaaggagagcgagacagcctgactgatattgcccagaatctgcctaaaacatgc
ccaaagaggagctaa
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