Neoarius graeffei (lesser salmon catfish): 132875804
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Entry
132875804 CDS
T10798
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03022
Basal transcription factors
Brite
Transcription machinery [BR:
ngra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132875804 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
132875804 (taf6)
Chromosome and associated proteins [BR:
ngra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132875804 (taf6)
STAGA complex
132875804 (taf6)
TFTC complex
132875804 (taf6)
SAGA complex
132875804 (taf6)
SLIK complex
132875804 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
132875804
NCBI-ProteinID:
XP_060768861
LinkDB
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Position
28:240356..264761
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AA seq
623 aa
AA seq
DB search
MAEERRQKACSVLFSTESMKVMAECVGVSQLQEESCVALSEEISYRIKEITQDAVKFMHH
GKRRKLTTSDIDHALKLKNVEPLYGFQTQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIDGVQPAIPENPPPVSKEQQKSESSEPLKAVKPGQEEDGSIQN
KAQGTASAEVKGKEKLRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIATDP
GLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMMKALMDNPTLYLEKYLHELLPAVMT
CIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFSKAWLDDKTQW
TTRYGCIAGLSELGPDVIKTLIIPRLSVEGARIKAVMEGPVVSNIDKIGADHVQSLLLKH
CASVICKLRSAPDVVDQYRADYGYLGPMLCSHVIKARAQNVLQSQSVNRTTLTITQSRPS
LSVSQSNVNNVSGSRTPSIIKVPSSLTLMSTRPATPTQPSPPATKYIVMATSAGPASTQQ
VITLSSSQSSSTVTSTVPSGSAPLQPLVKLEPGVTGSVSGSRPVQKYIVVSLPSSSSSSL
EKSSTSPISTESKPEHTDTHMTG
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggagcgtaggcagaaggcttgttcggtgctgttttccactgagtctatgaag
gtgatggcggaatgtgttggtgtgtcccagctgcaggaggagagctgtgtagccctcagt
gaggagatcagctacaggataaaagagattactcaggatgcagtgaagttcatgcaccat
ggcaaacgacgcaaactgacaacaagtgacatcgaccatgccctcaaactgaaaaatgtg
gagcctctgtacgggtttcagactcaggagtttattccgtttcgttttgcgagtggtgga
gggcgtgagcttcacttttatgaggagaaggaggtggacctgagtgacatcatcaacaca
ccccttccccgcgtgcccctcgatgtctcactcaaggctcactggttgagtattgatggt
gttcaacctgcaatcccagaaaatccacctccagtatctaaggagcagcagaagtcggag
tcgtctgagcctctgaaggcggttaaacccggtcaggaggaggacggctccattcagaat
aaggctcagggcactgcctctgcagaggtcaaaggaaaggagaagttgcgactgaagccc
cgcagtacacatgagctctctgtggaacagcagctctattataaagagatcactgaggcc
tgtgtggggtcttgcgaggccaagagagctgaggcgctgcaaagtatagccacagacccg
ggtctgtaccagatgctgccccgtttcagcaccttcatctctgagggggtgcgtgtgaat
gtggttcagaataatctggcattgttgatttacctgatgaggatgatgaaggctctgatg
gataacccaaccctttacctggagaaatatctgcatgagcttctccctgcggttatgacg
tgtatagtgagtaaacagctgtgtctgaggccagatgtggataatcactgggctctcagg
gactttgcggcacgtctcatggcacagagctgcaaaaccttcagcaccaccaccaacaac
atccagtcccgcatcactaagaccttcagcaaggcatggttagatgataagacccagtgg
acgactcgttacggttgtattgctggtctgtcagagctcggccctgatgtgataaagaca
ttgataatccctcgtttatcagtggaaggtgctcgaattaaggcagtgatggagggacct
gttgtgtccaacattgataagatcggtgctgatcacgtccagagtttactgctgaagcac
tgtgcgagtgtgatctgtaagctgcgttcagctcctgatgtagtggatcagtaccgagct
gattacgggtatttgggtccaatgctgtgttcacatgtcattaaagctcgagcgcagaac
gtcctgcagagtcagagtgtgaacagaaccacactgaccatcacacagtccagaccgtcc
ctgtctgtttctcagagtaacgtgaacaatgtgagtggatctcggactcctagcataatt
aaagtgcccagctctctcacactcatgtccactcggccggctacgcccactcagccatcg
cccccagcaaccaaatacattgtcatggccaccagcgcaggccccgcctccacgcagcag
gtgattactctaagctcctcccagtccagctctactgtcaccagcacagtgcctagtggc
tctgcccccctgcagccacttgttaaactggagccaggggtcacgggctcagtctcaggg
tcacgacctgtacagaagtacatagtagtgtctttgccttcatcatcatcatcgtcgctg
gagaagagcagtacatcaccaatcagcaccgagagcaaacctgaacacacagacacacac
atgacgggttga
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