Neoarius graeffei (lesser salmon catfish): 132875841
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Entry
132875841 CDS
T10798
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132875841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ngra04121
]
132875841
Enzymes [BR:
ngra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132875841
Ubiquitin system [BR:
ngra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132875841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
EphA2_TM
DUF6192
FANCL_C
Motif
Other DBs
NCBI-GeneID:
132875841
NCBI-ProteinID:
XP_060768930
LinkDB
All DBs
Position
28:16846789..17058213
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AA seq
801 aa
AA seq
DB search
MRLAAQRLAGLWPWLFTAALQVALGHAGLEVAATRALIKVTLLNPKATEKPITLEGVFAG
SSSGFAEGKLMQSHPLSLCNTSEDERQENFFISIVKLESPESKVPQCLPLLEKARLALNR
GAQAVIFDITDDVNAAIELNSGLLKKPVVMVKAADAEKLMGLVNKNEEAKVEINIMMETP
KWPHYEVGILLTVVLVVVAIIMIFAFRSRCRSNRTWDSVHQQTMRAISRLETRTYSSQGC
SGGSHHPRGGRGSNSSSNSGPMCAICLEEFLDGQDLRIISCAHEFHKECVDPWLLQHRTC
PLCMHNIMAGAEPSGRQPQRVRGHPPAEHSQAFLHPHPQHYPASHSFPQHPIPFSLRPHY
PRTLSGPYPQLGAYGGSPPYHTRLLSTSCSYHLAPDGQRARPRHSCRNVGHHYTSPRRPC
HHCHANRTRHQNHHQNQRHGGSQGRQDEGSCSGASYGTERSGYFPDGPGSDSSSGPCHGS
SSDSVLNCTDVSLQGVYGSCSTFRSSLSSEYDPFVYHNTGSEGPTGSTRPRSLDSGVNQT
SGGLGFEEPQQQQAVFSHVHYHRHRHHYYEEGEPSQGPGRGSDEEQGPSGVAAGNSPMSK
DSTLCQGAHVACHCPKMDPIDRCGPPGGVDDRDAAPPSPTSSLPGTSLLIPAPACCHPGH
PHCQKNPNCSLEASAPPIPAVHFHQRVDLQDDCSIHIHYGQSPTGYCCPSPLGTASTLLP
VPVILDSSGMAEWPCCRGARRGWQKQVQQAHSEPQLMGTGTLFDTPLCRGHHSAGHELPT
EICLYCQSVHNNQGSEEESGV
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgccgcacagcgcctggccgggctctggccgtggctgttcacggccgccctg
caggtggcgctgggccatgcgggcctggaggtggcagcgacccgcgccctcatcaaggtc
acgctgctcaaccccaaagccacagagaagcccatcaccctggaaggggtgtttgcggga
agcagcagcggtttcgctgagggtaaactcatgcagtctcatccgctgtctctgtgtaac
accagtgaagatgagcggcaagaaaacttcttcatcagcattgttaagctggaaagtcca
gagagcaaagtgccccagtgcctgccacttctggagaaggctcggctggctctcaacagg
ggagctcaggctgtcatttttgacatcaccgacgatgttaacgctgctattgagttgaat
tctggcttactgaagaagccagtggtgatggtgaaggcagcagacgctgagaagctgatg
ggactggtcaataagaacgaggaggccaaggtcgagatcaacatcatgatggagacacca
aaatggcctcattatgaagtgggaatcctcttgacagtcgtcttggtcgtggtggcaatc
attatgatctttgcctttcgttctcgctgcaggtccaaccgaacttgggactcggtgcac
cagcagaccatgcgggccattagcaggctggagacgcgtacctacagctctcagggctgc
tcaggaggatcccatcatccacgtggtggtcgagggtcaaatagcagctccaactctggc
cctatgtgtgccatctgcctcgaggagttcctggatggacaggacctgaggatcatctca
tgtgcgcatgagttccacaaggagtgtgtggacccttggctgcttcagcaccggacatgt
ccgctctgcatgcacaacataatggcaggtgcagagccaagtggccgtcagcctcagcga
gttcgtggacatccacccgcagagcacagccaggcttttcttcaccctcacccacagcat
tacccagcttctcactctttcccccagcaccctattcccttctccctacgaccccattac
ccccgcaccctctcgggaccctatccacagcttggagcttatggtggctcccctccctac
cacactcgcttattgagcaccagctgcagttatcatcttgcccctgatgggcaacgtgcc
cgacctcgccacagctgccgcaatgttgggcaccactacacgtcaccgcgtcgtccatgc
caccactgccatgccaaccggacgcggcatcaaaatcaccaccaaaaccagcgccacgga
ggctctcaggggcgccaggatgagggcagctgttcaggggccagttatggcacagaacgc
agtggctacttccctgatggacctgggagtgactcgagctcaggcccgtgccacggctca
tccagtgactcagtgctaaactgcaccgacgtaagcctgcagggtgtctacggcagctgc
tccacctttcgtagttcgctcagcagcgagtatgacccatttgtctaccacaataccggt
tctgaaggtccgacaggtagtaccaggccccgatctctagattcaggagttaatcagact
agtggagggcttgggtttgaagaaccacagcagcaacaggctgtattcagccacgtgcac
taccatagacacagacaccactattacgaagagggtgagcccagccaaggaccaggaaga
ggctctgatgaggagcaagggccttcaggagtagcagcaggcaattcgcccatgagtaag
gactcaactttgtgtcagggagcacatgttgcctgccattgccccaaaatggaccctata
gacaggtgtggacctcctggtggagtggatgatcgggacgcagctcctccatctcccact
tcttccttgcctggcacctcattgctgatccctgcaccagcctgctgccacccagggcac
ccacactgccaaaaaaaccccaactgcagcctggaagcttctgccccacccattccagcg
gtgcactttcatcagagggtggatctacaggacgattgcagcatccatatccactatggg
caaagtcccacaggttactgctgcccctctcctctgggtacagcgtccacactgctaccc
gtacctgtaatcctggactcaagtgggatggcagagtggccctgctgtaggggggcacga
agggggtggcaaaagcaggtgcaacaggctcactctgagccacagctaatggggacaggc
actctatttgacacacctctgtgcagagggcatcacagtgccgggcatgagctgcccaca
gaaatctgtctctactgccaaagtgtacacaataatcagggatcagaggaagagtctggt
gtttga
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