Neoarius graeffei (lesser salmon catfish): 132876076
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Entry
132876076 CDS
T10798
Symbol
arhgef12b
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04270
Vascular smooth muscle contraction
ngra04625
C-type lectin receptor signaling pathway
ngra04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
132876076 (arhgef12b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
132876076 (arhgef12b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
132876076 (arhgef12b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ngra04131
]
132876076 (arhgef12b)
Membrane trafficking [BR:
ngra04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
132876076 (arhgef12b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
OmpH
Motif
Other DBs
NCBI-GeneID:
132876076
NCBI-ProteinID:
XP_060769310
LinkDB
All DBs
Position
28:42842329..42995442
Genome browser
AA seq
1458 aa
AA seq
DB search
MSGSQSTIADRFPKKPTRPGSILNKDHPPDKKPKSEKVSVLPTHDFDPTGLVQRCVIIQK
DKNGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLPQIPLSEGEGDGNPVSSLSSPHSPGLTIAERSSSSSTSPSDCITSP
LPAWEDSGAVFNRKVDVLQKMLMKEQQDLQAMKEEYNRNPTARLLKDIQEAQKHIPLLQG
QLSKATTAGQDGLLSPRLGEGDAEEGGGLGDVDASPSWQSDSESPMNSNSTPVTPSMIPE
SLYQRDTPCHSPKSTPRISLNSCPSPDGEDVVDLDSNYQCSVGSPSSRLPPPIIGAEDDD
FNTEQEQMNGQCSCFQTIELLKSRPAHLAAFLHHVVSQFDPAPLLCYLYAELYKQSNPKD
TRRIFGELHSTFMDRSAQLKVVAPDSILADMDRWKPDLIPEDVQRQHVQQLQDTLLPDIQ
KHLEDFRQKRSMGLTLAEAELNRLDVRVRDRVALERERSCSEHIISKINEVLLTPSATEE
EKCTAMQFVIQAYMKHLGVKVKESRGFEPKPKLINLLPKIKKTIKPEKDGGVEEKLKKSR
FQIMRSHNKRPSRTDISSITKALEQNKQRTQKQHSLSSVGPTDQAETPAAGRARSSQSSE
GPDGSMGSVSSPLFSPFSAPSFDSAVRELEPGTAPLSALPRPGEVGSQGEGQDSSSSGTH
FDFTYPLDHLQEEEPETDRNPDGGTPRPLRRMELLSSGEVQSEDDQAFEVEPEQDPPHWQ
TLVSTDVLALLPPHEIKRQEVINELFYTERAHLRMLKVLDNVFYQRMTREAILPPADIKN
IFTNLEEIVQLHVSITEQMTAIRKKNETAVVDLIGDDLLSWFSGTEEEKIKRAVGTFCSN
QPFALELIKSKQKKDQRFAAFVQEAESNRQCRRLQLKDIIPVEMQRLTKYPLLLENIAKY
TDDAEEKSKVKRACECCRQILNHVNEEVKEAENKQRLEDYQRRLDLSSLKQSEYPMIAEF
KNLNLTERKMVHEGPLSWKVNKDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTA
ETKHIFSPIIKLSTVLVRSVATDNKSFFVVSMSDYGAQIYELMAQTVSEQKTWHDLIGQR
ADCMKSLPQNDGEREGDDEMSSGMPKMNKDPDRISTGSIPSPEKDAASCSEIMQMPPAGR
NPFDTKSEDEGEAEGEGESERSLQVQDEEEEEEEEEEEAFLDPELADRLPFLKQRTRHAI
AVEEKDFETFDLPPLMADEALRTLAALRQLLINHMDGQEDRERGEARLREPRAASLQGSE
ENPAPSGSVENGAERTENRHELPSGDTGFFETSEDFVGSYMVLEGYGGSGESSTDDDGQV
CSTDPAAAGDSGIDLKKLLSSASSQSRGPNFSRQVMTHLRLLQANLQQLKDVESKYNQLC
QRHSEQAATESEENKDKS
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctcacagtccacgatagctgacaggtttcccaaaaaaccaaccagaccagga
agtattctcaacaaggaccaccccccagacaagaagcccaagagtgagaaggtgtcagtg
cttcctacacatgactttgaccccacaggacttgttcagcggtgtgtgatcatccagaaa
gataagaatggcttcgggttgaccgtgagcggagataacccagtatttgtccagctggtg
aaagaagatggagctgctatgcgagctggtgttcagacgggtgatagaattattaaggtc
aacgggacgttagtaacgcattccaatcatgtcgaagtcgtgaagttaataaaatcgggt
tcatacgtggctctgacggtgctggggagacccccgggcctgccgcagatccccttatca
gagggagagggagatggaaaccctgtctcgtccctcagctcccctcactcccccggccta
actatagccgagcgctcatcctcttcctcaacctctccctccgactgcatcacctcccca
ctgcctgcatgggaggacagcggcgcggtgtttaatcggaaagtcgacgtcctgcagaag
atgctgatgaaggagcagcaagacctgcaggctatgaaggaggagtacaacagaaaccct
acagcgagactactgaaggacatccaggaagcccagaagcacattcctctgcttcaaggc
cagctcagtaaagccactacggctggacaggatggcttgctttctccaagactgggagaa
ggagacgcagaggaaggaggagggttaggagacgtagatgcgtctccgtcctggcagtct
gactccgagtcacccatgaacagcaactcgacaccggtcacgcccagtatgatcccagaa
agcctgtaccaaagagacacgccatgccacagcccaaagtcaacgccgcgcatcagcctc
aactcgtgcccgtctcccgatggcgaggacgtggtcgacctggactcgaactaccagtgc
agcgtgggaagcccgtcgtcccgtctgccgcctcccatcataggagctgaggacgacgac
ttcaacacggagcaggagcagatgaacggccagtgtagctgttttcagaccatcgagctg
ctgaagtctcggcctgctcacctcgcagccttcctgcatcacgtggtctctcagtttgac
cctgcacctctgctgtgctacctctacgctgagctctacaagcagagcaaccccaaagac
acacggcggatattcggggagctccattccacgttcatggaccgatcagcgcaactgaaa
gtagtggcgccagactcgatcttggctgacatggatcgatggaagcctgacttaattcca
gaggacgttcaaagacagcatgtgcagcagctacaggacacactcctaccggacatccag
aaacacctggaagacttcaggcagaagcgcagtatgggcctgactctagccgaagctgag
cttaaccgactcgatgtgcgcgtacgagaccgtgtggccctggagagagagcgctcgtgc
tcggagcatatcatctccaagatcaatgaagtcttgttgacgccatcagccacagaggag
gagaagtgtaccgccatgcagttcgtcatccaggcctatatgaagcaccttggggtgaag
gtgaaggaatctcgggggtttgagcccaaacccaagctaataaaccttctcccgaaaatc
aaaaagactataaaaccagagaaggatggaggtgtggaagagaagctgaaaaagtcccgc
ttccagataatgcgcagccataacaagaggcccagccgaaccgacatctcctcaattacc
aaggctctagagcagaataagcagcggacgcaaaagcagcactcgctgagctctgtcggg
ccgaccgatcaggctgaaacacccgcagcaggccgagcacggagcagccagtctagcgaa
gggccagacggcagcatgggctccgtcagctcccctcttttcagccctttctctgccccg
agcttcgacagcgctgtcagagagttagagccaggcactgcgcccttgtcagcattaccc
agacccggagaggttggttctcagggtgaaggacaggactcctcttcctcgggcacgcac
tttgacttcacctatcctctggaccatctccaagaggaggagcctgaaacagacaggaat
cctgacggagggacgccacggccactcagaaggatggagctgttgagctcaggcgaggtt
cagagtgaggatgatcaggcgtttgaggtggaaccggagcaggatcctcctcactggcag
acgctggtgagcacagacgtcctcgccctgctgccaccgcatgagatcaagagacaggaa
gtgatcaatgagttgttctacacggagcgtgctcacctgcgcatgctgaaggtcctggat
aacgtgttctaccagaggatgacccgagaggccattctgccccctgcagacatcaaaaac
atcttcaccaacctggaggagatcgtccagctacacgtgtctataacggagcaaatgacg
gccattcggaagaagaacgagacggcggtcgtagacctcataggagacgatttgctgtcc
tggttcagcggaacagaagaggagaagatcaagcgggcagtgggaaccttctgcagcaac
cagccctttgctctggagctaataaagagcaagcagaagaaggatcagcgatttgctgcc
tttgtgcaggaggcggagagtaatcggcagtgtcgaagactgcagctgaaggacatcatt
cctgtggagatgcagagactcaccaaatacccgcttctgctcgaaaacattgcgaaatac
accgacgatgccgaggagaaaagcaaagtgaaacgagcctgcgaatgctgccgtcagatc
ctcaaccacgtcaatgaggaagtaaaagaggctgaaaacaaacagagattagaggactac
cagagaaggctggatctctcgtcactgaagcagagcgagtaccccatgatcgcggagttt
aagaacctcaacttaaccgaacggaaaatggtgcatgagggcccactgtcctggaaagtg
aataaagacaagactattgagctctacacactcctgctcgaggacatcttggtgctgctg
cagaggcaggatgagaagctgatcctgaagtgccacagtaagaacctggcaggcacggcc
gagaccaaacacatcttcagtccgatcatcaagctcagcaccgtcctggtgcgctccgta
gcaacagacaacaagtcgttctttgtggtgtccatgtccgattatggcgcgcagatctac
gagctgatggcacagaccgtgtccgagcagaaaacgtggcatgatctcatcgggcaaaga
gcagattgtatgaagagtctgcctcagaacgatggggagcgggaaggcgatgatgagatg
agctctggcatgccgaaaatgaacaaagatccagatcgcatctccaccggaagcatcccg
tctccagaaaaagatgctgcttcctgctccgagatcatgcagatgcctccagcaggaagg
aacccatttgacaccaagtcagaagatgagggagaggcagaaggagagggtgagagtgag
cgctcgctgcaggttcaggatgaagaagaagaagaggaggaggaggaagaggaggccttc
ctggaccccgagcttgcagacagacttccgttcttgaagcagcgcacgaggcacgccatc
gctgtagaggagaaggactttgaaacctttgacctgcctccactgatggcggacgaagca
cttcgaaccttggctgctctgaggcagctcctgatcaatcacatggacggtcaggaggac
agggagaggggggaggctcggctgcgtgagccgagggcggcgtctctgcagggctctgag
gaaaaccccgcccccagtggctcagtggagaacggcgctgagaggacagagaaccgtcac
gagctgccctcaggagatacaggcttctttgaaacctcagaggactttgtaggtagttac
atggtgctggagggttacggcggttcaggtgaaagcagcactgatgatgatgggcaggtc
tgcagtaccgaccctgctgcagcaggagactcgggcatcgacctgaagaagctcctgtcc
tccgcttcgtctcaaagcagaggacccaacttcagcaggcaggtcatgacccacttgcgc
ctgcttcaggcgaacctgcagcagctgaaggacgtagaatcaaaatataaccaactatgc
caaaggcactcagagcaagcagctactgaatcagaagaaaacaaagataaaagctag
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integrated database retrieval system
