Neoarius graeffei (lesser salmon catfish): 132881465
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Entry
132881465 CDS
T10798
Symbol
irf4a
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132881465 (irf4a)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
132881465 (irf4a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
132881465
NCBI-ProteinID:
XP_060769929
LinkDB
All DBs
Position
1:complement(106166531..106199475)
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AA seq
462 aa
AA seq
DB search
MRKGMNVDGDCSMSVNCGNGKLRQWLIEQIDSGEYPGLVWENEEKTIFRIPWKHAGKQDY
NRDEDAALFKAWALFKGKYREGVDKPDPPTWKTRLRCALNKSNDFDELVDRSQLDISDPY
KVYRIIPEGAKRGAKSSSIEDNSSHVTSLSYSMHSPYPPLQPQMSSYVLQPDRRDWRDFS
PEQTHHPPPHAEIPYGPYPSRPLQWHTQPCDNGYQISGSFYTYTHPESHPVSVDPSMRSA
ETMAISDFRLHVSLYYRESLVKEVTTSSPEGCRISSSPSPSSPSSPSSPCIEDRLFGGPE
PVLFPFPYPQSQRRGADKLPNVLERGVLLWLSPDGLYAKRLCQSRVYWEGPLAPYSDKPN
KLEKEQTCKLLDTQHFLSELQGYIHNGRPMPRYQVVLCFGDEYPDPQRQSKMITAQVEPM
FARQLVYYAGQTNGHYLRGYELPAQGTLPVEEYPRSLQHMQE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaagggatgaacgtagatggggactgcagcatgtcagtcaactgcggcaatggg
aagctccggcagtggctcatcgaacagatcgacagcggtgagtatccaggcctggtgtgg
gagaacgaggagaaaaccatctttaggatcccatggaaacacgcaggaaagcaggactac
aaccgagacgaggacgcagcactgttcaaggcttgggctctgtttaaggggaagtacagg
gaaggcgtggacaagccggaccccccgacttggaaaacgagactccgctgtgctctcaac
aagagcaacgactttgatgaacttgtggacagaagccaactggacatttcggacccttat
aaagtctataggatcatccctgagggagcaaagagaggcgccaagtccagcagcattgag
gacaactcatcacacgtgacgtctctcagttactccatgcactctccttatcctcctcta
cagcctcagatgtctagctacgtgctgcagccggacaggagagactggcgagacttcagc
cctgagcagacacaccacccgccaccgcacgcggagataccgtacggcccgtatccgtcc
cggcccctgcagtggcacacgcaaccctgcgacaacgggtaccagatatccggatccttc
tacacgtatactcatccagagtcgcatcctgtgtccgtggacccgagtatgagatccgca
gagaccatggcaatctctgatttccgcctgcacgtgtcactgtactaccgcgagtctctg
gtaaaagaggtcaccacctccagtcctgaaggttgccggatctcgtcctctccctccccg
tcctctccgtcctccccgtcgtccccgtgcattgaggacaggctcttcggcgggcccgaa
cctgtgctgttccccttcccgtacccgcagtcgcagcggcgcggtgctgataagcttccc
aacgtgctggagcgtggcgtgcttctctggctctcgcctgacggactctatgccaagcgc
ctgtgccagagcagggtgtactgggaaggaccgctagcgccatactcagacaaacccaac
aagctggaaaaggagcagacctgcaagctcctggacacacagcacttcctgtcagagttg
cagggatacatccataacggacgcccgatgcccaggtaccaggtggtgctttgctttgga
gatgaatatccagatcctcagcgacagagcaagatgatcacagctcaggtggagccgatg
tttgccagacagctggtgtactacgccggtcagaccaatgggcattacctgcggggttac
gagctgcccgctcagggaaccctgcccgtggaggagtacccgaggagtctgcagcacatg
caggagtga
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