Neoarius graeffei (lesser salmon catfish): 132881785
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Entry
132881785 CDS
T10798
Symbol
thoc5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
ngra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132881785 (thoc5)
09122 Translation
03013 Nucleocytoplasmic transport
132881785 (thoc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132881785 (thoc5)
03041 Spliceosome [BR:
ngra03041
]
132881785 (thoc5)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132881785 (thoc5)
Spliceosome [BR:
ngra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132881785 (thoc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
DUF2542
Motif
Other DBs
NCBI-GeneID:
132881785
NCBI-ProteinID:
XP_060770654
LinkDB
All DBs
Position
2:complement(64558310..64584595)
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AA seq
684 aa
AA seq
DB search
MSSEPLKKRKTKVIRSDGSTPETKRARGEGDQDVRTYNEELELEARDPEQDYALYKNTCE
ALATLMSEIQELKASGAKEGSIEVEAKRRQGCVHFITLKKLNRLSHMRLKKARDQTHEAK
QKVDVLHLQLQNLLYEVMHLQKEIGKCLEFKSQHEEIELVSVDEFFKEAPAEISRPHLTK
DDPHQLTLARLDWELEQRKRLAEQYKSSLCTKEKILKGIELKKEYLSSLQPGLQAIMQAS
LPVQEYLSMPFEHVQKQAEIARHLPPPLYVLLVQASAYGQACDKNLSVSISGDVDEAKAL
SRPPEDSQDDESDSDAEEEQQNTKRRRGTVGVQLDDKRKEMLKRHPLSLCIDLKCKDGSV
LHLFFYYLMNLNILTVKAKVSASTDLSGAISAGELLNPESLLNCLYANDDGRETPNPTNR
YQFDKVGITTFADYVSELGHPYIWVQNLGGLQFSSDTPQVEGVRSSLSASHMENTVKLLR
GRLLSRLALHKQFSSLEHSIVPVSTECQHLFPAKVVSRLARWTMMSCQDFLELDFVQHVV
KAGLVRETDLFFMAVVERGTARLQAAVVLNPRYPEITPIFSLSLLWKGERSGRTDDNLRA
LESEVNVFRSELQGPRPGLQLLTNQIQRLCVCLDVYLETESQVCDGSEGPREFPREKMCL
RSARGPNRLKPFKYNHPQGFFSHR
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgagcctctcaaaaagcgcaagaccaaagtgatccgcagtgacggcagcact
cctgaaactaaacgggctcggggagaaggagaccaggatgtgcgtacatataatgaagaa
ttggaactggaggctcgagaccctgaacaggattatgccctgtataaaaacacctgtgag
gcgctggctacactaatgagtgaaatccaagagctgaaagccagtggagctaaagaaggg
agtatcgaggttgaggcaaaacgcaggcaaggatgtgttcacttcatcactctgaagaag
ttgaatcgtctgtcacacatgaggctgaagaaagcacgggatcagacacatgaggcgaag
cagaaagtggacgtgttgcacctacagcttcagaatcttctctatgaagtcatgcatctt
cagaaagaaattggaaaatgcctcgagttcaagtcccagcatgaagagattgagttagtc
agtgtggatgagttctttaaggaggccccagctgaaatctcccgccctcatctcaccaaa
gacgaccctcaccagctcacacttgctcggctcgattgggaactggagcagaggaaaagg
ttggctgagcagtataagagctcgctatgcactaaggagaagatcttgaaaggaattgag
ctgaagaaggagtacctgagcagtcttcagccaggcctgcaggccatcatgcaggcgtct
ctgcccgtgcaggagtacttgtccatgccatttgagcatgtgcagaaacaggctgagatt
gcgcggcaccttccacctcctctgtacgtgctgcttgtgcaagccagtgcttatggacaa
gcctgtgacaagaatctgtctgtgtccatcagtggagatgtggatgaagccaaggctctt
tccagaccacccgaggattctcaagatgatgagagtgattctgatgcagaggaggaacaa
cagaacactaaacgacggcgaggaactgttggtgttcagcttgatgacaagcgtaaagaa
atgctgaaacggcatcctctttcattgtgcatcgacctcaagtgtaaagatggcagtgtg
ttgcatctgtttttttattacctgatgaacctcaacattctcactgtgaaagcaaaagtt
tcagcctccacagacctttcaggagccatcagcgcaggggagctgctgaacccagaatct
ctgctgaactgcctgtatgctaatgatgatggccgagaaacccccaatcctaccaaccgc
taccagtttgacaaagtgggcatcacaacttttgctgattatgtgtctgaacttggacat
ccgtacatttgggtgcagaatctgggaggattacaattttccagtgacacaccacaggtg
gaaggggtacgcagttctctcagtgccagtcatatggagaacaccgtgaagctgctgaga
ggacgcttgctgtctcgcctggctttgcacaaacagttcagctctctagagcatagcata
gttcctgtctccaccgagtgccagcatctcttcccagctaaagtggtctctcgcctggct
cgctggactatgatgagctgtcaggatttcctggagttagactttgtgcagcatgtggtg
aaggctggcctggtgcgggagactgacctgttcttcatggcagtagtggagaggggaaca
gctcgtcttcaggcggcggtggtgttgaatcctcgctatccagagatcacgcctatcttt
tcactttccctgctctggaaaggagaacgcagtggccgcacagatgataacctgcgggcg
ttggagagcgaggtgaatgtgtttaggtctgaactccagggaccccgaccaggcctacag
ctactgaccaatcagatccagcgtctgtgtgtgtgtctagatgtctatctggagaccgaa
agccaagtgtgtgacggttctgagggcccgagagaattcccaagggagaaaatgtgctta
cgttctgccaggggacctaatcgtctgaagccttttaagtacaaccaccctcagggcttt
ttcagtcatcgttaa
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integrated database retrieval system
