Neoarius graeffei (lesser salmon catfish): 132881840
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Entry
132881840 CDS
T10798
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a isoform X1
KO
K05636
laminin, beta 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132881840 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132881840 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
Alanine_zipper
ATG17_like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
132881840
NCBI-ProteinID:
XP_060770774
LinkDB
All DBs
Position
2:complement(68947032..68989281)
Genome browser
AA seq
1782 aa
AA seq
DB search
MIFHLAALLCLGARSLAELPELGDVCREGSCYPATGDLLIGRAHQLSATSTCGLEKTEPF
CIVSHLQEEKKCFVCDSRESYNEAEHTTSHRIENVVTTFAPNRLKTWWQSENGLENVTIQ
LNLEAEFHFTHLIMTFKTFRPAAMVIERSADFGKTWQVYRYFAYDCESSFPSISRGPMKK
VDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIDDPYSPRIQNMLKITNLRVKFTKLHTLG
DNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPINGTGEVVDGMVHGHCMCNHNT
MGLNCELCQDFYHDLPWRPAEGRNTNACKKCNCNHHSTSCHFDMAVYQASGNVSGGVCDD
CQHNTMGHHCEQCKPFFYQHPEKDIRDPNICDPCDCDPVGSLNGGICDALTDVSLGLIAG
QCRCKPNVEGERCDQCKQGHYGLSDDPLGCKVCTCNPVGTVPGGSPCDTISGSCYCKRLV
MGRDCDQCLPQHWGLSNDMDGCRPCDCDAGGALNNDCSPETGFCQCREHMSGRRCDQVES
GFYFIALDHYVYEAEDAKFGPGVTVVQRPYPQDRSPTWTGIGFVNVPEGAYLEFSIDNIP
FSMEYDILIRYEPQLPEQWEEVLMTVIRPHAITADSRCVNTVPDDDNQMVSLHPGSRYMV
LPRPVCFEEGLNYTVRLSLPRYSTSSDIQSPYTLIDSLVLMPHCKNLDIFSGSGSEGGDL
VTNSAWDTFQRYRCLENSQSVVKTPMPDICKNYIFSVSALLHQGAKACACDPQGSLSTVC
DPNGGQCQCRPNVVGRNCDKCAPSTYLFGPQGCRPCECDPQGSVHAFCHEATGQCECIPR
VYGRQCDRCLPGHWGFPNCRPCTCNGHAEQCDLQTGQCLDCRDHTTGHSCERCLHGYYGD
PVLGSGDHCRPCMCPDGPGSSRQFAGACYKSHDSDQVYCVCNQGYKGARCDECAPGYYGN
PHEAGGECRPCQCSNNIDMMDPGSCDARTGVCLKCLYHTEGESCSQCKLSYYGDALTQNC
RRCVCNHMGTRQDTCPSVGECHCDQNNGQCQCLPNVVGQHCDLCAPDTWNIASGQGCEAC
DCDPSHSFSSTCNEISGQCMCKPGFGGRTCRECRELFWGNPEVKCHACDCDPRGIAEQQC
NKATGHCLCVEGVSGPRCDTCARGYFGEFPHCERCHQCFAEWDVIVGDLTNQTHRLMQKV
NAIKSNGITGPYQDTINNVERSANSIRELLAQNPATQPLTEIQSLLEQAISLMAEMNEKL
NQTEELLSQISDNSTDSKLEALSDEAQKLQRTVKDLQDQVQFIKNSDVRGALDSVRKYMQ
ESETAEARVNASISDPESLVEQSASLRNYTEAMMNETKEEFQRKQDEHTKALDNLAGQLE
TLDLSELSEKTCGSRAGSEACADSPCGGLGCVDAEGNRKCGGEGCNGLTTLAHNAWQKAK
DFDQDIVSAMEEVDKLSKMVSEAKVKADEAKLNAQEVLQKTNETKQRVDDSNEELRRLIK
QIRDFLTQEGADLESIEAVANEVLQMQMPTTPAQLQNLTADIRERVSSLSDVADILNQSA
ADIERAETLLEQARKARKEASDVKSTAELVQEALDQAEKAQTAVTEALKQATSDIKGTQD
LLVSVESETADSEFKLSNATQRLLQLEKDVVLLKEKALKTSTTAETTERDIDSVNELAEQ
IKKDLDTELKDKYGTVEELITQKAQGVADAKKRAEMLQQEAKELLLQASDKLQLLKDLEK
SYDENQKILEDKANQLVDLEKAVKELLQEISQKATLYSTCLF
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgatattccatctcgcagcccttttgtgtttaggggcgcggtcattggccgagctgcct
gagcttggggatgtgtgcagagaaggaagctgttaccctgccactggagacctactgatc
ggcagagcccaccagctctcagccacttccacctgtggcctggagaaaaccgaacctttc
tgcatcgtcagtcaccttcaggaagagaagaaatgctttgtgtgcgattctagggagtcc
tacaatgaggctgaacatacaaccagccacagaatcgagaatgtggtgaccacgtttgct
cctaaccgacttaagacatggtggcagtcagaaaatggcttggagaatgtgaccatccaa
ctgaacctggaagcagagttccacttcacccatctcatcatgaccttcaagaccttccgg
ccagctgctatggtgatcgagcgctcagctgactttggaaagacatggcaggtgtaccgc
tactttgcctatgactgtgaatcctcctttccctcaatctctcggggccccatgaagaag
gtcgatgatgtcatttgcgattctcgctattctgatattgaaccatctacagagggagag
gtcatctttcgagtattggacccggcattcaggattgatgatccttacagcccaaggatc
caaaatatgctgaagattaccaacctgagagtgaagtttactaaactgcacacactggga
gacaatctgctggactcacgtattgagatcaaggagaagtactactatgctatttatgac
atggtggtgaggggtaactgcttctgctatggccacgcttctgagtgtgctcccatcaat
ggaactggagaggtggtggatggaatggtccatggccactgtatgtgtaaccacaacacc
atggggctgaactgtgagctttgtcaggacttctaccatgacctgccctggaggcctgca
gagggccgtaacaccaacgcctgcaaaaaatgcaactgcaatcaccatagtacctcgtgc
cactttgacatggcggtgtaccaggcctccggtaatgtcagtggaggagtgtgtgatgac
tgccagcacaacactatgggccaccattgtgagcagtgcaagcccttcttctaccagcat
cctgagaaggacatccgtgaccctaacatctgtgacccctgtgactgtgatcccgttggt
tctctgaatggaggcatctgtgatgcgctgacagatgtttctcttggactgatcgcggga
cagtgtcgttgtaagcctaatgtggagggggagcgttgtgaccagtgcaagcaaggccat
tatggccttagtgatgatcctctgggttgtaaagtttgcacctgtaaccctgtgggaaca
gtccctggtggaagcccttgtgacacaatttcagggagctgctactgtaagcgcttagtt
atgggaagagattgtgaccagtgcttgcctcagcactgggggctcagcaatgacatggac
ggctgtaggccatgcgattgtgatgctggaggtgctctcaataatgattgttctccagag
acagggttttgtcagtgtcgggagcacatgtcaggcagacgctgtgaccaggtggagtcc
ggtttttacttcattgctctggaccattacgtttatgaagcagaagatgcaaagttcgga
cctggtgtgacagttgtacagagaccgtatcctcaggaccgaagtccaacctggactggt
attggctttgtgaatgttccagaaggagcttatctggagttcagcattgacaatatcccc
ttttccatggaatatgacatccttattcgctatgagccccagcttccagagcagtgggag
gaagtactgatgactgtcatcaggcctcatgccatcactgctgacagccgctgtgtcaat
actgtgccagatgatgacaaccaaatggtgtccctacaccctggctccagatatatggtg
ttacccaggccggtgtgttttgaagagggattgaactacacagtgcgtctgagtcttcct
cgctactctaccagcagtgacatccagtccccatacacactcattgactcccttgtgttg
atgccacactgtaagaatctggatatcttctctggttctggatcggagggaggtgacttg
gtgaccaacagtgcatgggacaccttccaacgctaccgctgcttagagaatagtcagtct
gtggtgaagacccccatgcctgacatctgcaagaactatatcttcagtgtgtctgctcta
ctgcatcagggagctaaagcttgtgcgtgtgaccctcagggttctcttagtacggtttgt
gacccgaatggtggccagtgccaatgccggcccaacgtggtgggtagaaactgtgacaaa
tgtgccccttctacttacctctttggacctcagggctgcagaccatgtgagtgcgatcca
caaggttcagtgcatgcattctgccatgaggccactggtcagtgtgagtgtattcccaga
gtgtatggacgtcagtgtgatcgctgtctccctggacactggggcttccccaactgccgg
ccatgtacttgtaatggtcatgcggagcagtgtgacctccaaacggggcagtgcttagac
tgtagggaccacacaactggacacagctgtgagagatgtttgcatggttattacggtgac
cctgtcctgggatctggagaccactgccgcccctgtatgtgtccagatggccctggcagc
agccgacagtttgctggagcatgttataagagccatgactcggaccaggtctactgtgta
tgcaaccagggctataaaggtgcaaggtgtgatgagtgtgcaccaggctactatggaaac
cctcatgaggctggtggagagtgtcgtccctgccagtgcagtaacaacattgacatgatg
gacccaggatcatgtgatgcacgcacaggtgtctgcctcaaatgtctgtaccacacagag
ggcgagagctgcagccagtgcaagctgagttattatggagatgcccttacacagaactgc
aggcggtgtgtgtgtaaccatatgggcactaggcaggacacctgtccctccgtcggcgaa
tgccactgtgaccagaacaatgggcagtgccagtgcctgcctaatgtagttggacagcac
tgtgatttatgtgccccagacacttggaacatagccagtggtcaaggctgtgaggcctgt
gactgtgaccccagtcactcattcagctctacctgcaatgagataagtggccagtgtatg
tgtaagcctggatttggaggaagaacatgcagggagtgcagagagctcttttggggtaac
cctgaagtcaaatgtcatgcatgtgactgtgaccctagaggaattgctgagcagcagtgt
aacaaagccacaggacactgtttgtgtgtggagggtgtgtcagggccccgctgtgacact
tgtgctcggggttactttggtgaatttccacactgtgaacgttgtcaccagtgcttcgct
gaatgggatgtgatcgtaggagacctcactaaccagacacacagactgatgcagaaagtt
aacgccattaaatccaacggcatcacagggccctaccaggacaccatcaacaacgtggag
aggagtgccaattcaatccgtgagcttctggcccagaaccctgccactcagccactcact
gagatccagagcctgctggagcaagctatatccttgatggctgaaatgaatgagaagctg
aatcagacagaggagctcttgtctcagatctctgacaacagcacagactcaaagctggaa
gcactcagtgacgaagctcagaaactgcagcgcactgtaaaggacctgcaagaccaagtt
cagtttataaagaattcagatgtgcgaggagcattagacagtgtgaggaaatacatgcag
gagtcagaaacagcagaggctcgtgtgaatgcctccattagtgatcctgagagcctggtg
gagcagtcagcctcacttcgcaattacacagaggccatgatgaatgagactaaagaagag
tttcagagaaagcaagatgagcataccaaggcactagacaatctggctggccagcttgag
acactggacctttctgaactcagtgagaagacttgtggcagtcgtgctggctcggaggcc
tgtgctgactctccgtgtggaggtctgggctgtgtggatgctgaaggaaacaggaagtgt
ggaggagagggatgtaatggtctcaccacattggcccataatgcctggcagaaagccaag
gactttgaccaggacatcgtcagtgccatggaggaggtggacaagctttccaagatggtg
tcggaagcaaaagtaaaagcagatgaagccaagctgaatgctcaagaggtgctgcagaag
accaatgagaccaagcaacgtgtggatgacagcaacgaggagctgcgcaggctcatcaaa
cagatccgagacttcctcacccaagaaggagcagatctggagagcattgaggctgtggct
aacgaggtgctgcagatgcagatgcccaccacgccggctcagctgcagaacctgactgcc
gatattcgtgagcgtgtgtccagcctgtctgatgtggcggatatcctaaaccagagtgct
gctgatatcgagagagccgagacgctgctggagcaggcccgcaaagccaggaaagaagct
tctgatgtcaagagcacagctgagctggtacaggaagctctggaccaggcagaaaaagct
cagacagctgtgactgaggcgttgaagcaggctactagtgacatcaaaggaacacaggat
ctgcttgtgtctgtagagtccgagacggcagattcagagttcaagctgagtaatgctacc
cagaggctacttcagctggaaaaggacgtggttcttttgaaagaaaaagccctcaaaact
tccaccactgctgaaacgacagagagagacatagacagcgtcaatgagctggcagagcag
atcaaaaaggatctggacacagagctgaaggataagtatggtactgtggaggagctcatc
actcaaaaggctcagggtgtagcagatgctaagaaaagagctgagatgcttcagcaagaa
gccaaagagctgctgctgcaagctagtgacaaactacaacttctcaaagatttagaaaaa
tcctacgatgaaaaccagaagattctggaagacaaagccaaccagctggtggatctagaa
aaggctgtgaaagagttacttcaagaaattagccagaaagccaccttatacagcacctgt
ctgttttaa
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