Neoarius graeffei (lesser salmon catfish): 132881841
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Entry
132881841 CDS
T10798
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
KO
K06245
laminin, beta 4
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04510
Focal adhesion
ngra04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132881841 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132881841 (lamb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
LAMININ_IV_B
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
132881841
NCBI-ProteinID:
XP_060770776
LinkDB
All DBs
Position
2:complement(68996460..69047827)
Genome browser
AA seq
1876 aa
AA seq
DB search
MARSAADSQTVNELHLLEFLSVPTNAKATMCRRWMSVVLLLFLVVPAHFQEECEWSSCHP
TLGDLMVGRAAQLSASSTCGLTGPQNYCILGYLEDEQKCFTCDSRSPYNRDNNPNSHQIE
NIITTFEPEHKMKWWQSENGVHQVSIQLDLETMFQFSHLVMTFKSFRPAAMLVERSKDFG
RTWKVFRYFSADCPTNFPRISTGPAKTIDDLICDSRYSGAEPSTDGEVVLKALDPTFQIE
NPSDPTIQELISMTNLRVNFTRLLTLGDDLLGRKRRNPQEKYYYALYEMVVRGSCFCNGH
ASQCMPVYNARGDTLNEPGMVHGRCMCQHNTMGNHCEKCQDFYNDAPWRPAGSTDPHVCR
RCNCNGHSERCHFDLQRYITTGQVSGGVCDDCRNNRIGVECELCKPYYYQDPLRSLNDPY
ACIPCTCHSAGSVDGRLCDPVSGRCVCKQNVEGERCDRCKTGYYRLSQEDPSGCQRCMCN
FLGTISTSPCDQNTGHCNCDHFAHGPECNQCVPGYWGLGNTVYGCQPCDCDIGGAFSTLC
ISENGQCQCRANMVGNRCSEPAPGYFLAPLDFYLYEAENAFPLDTRCSTYLVRPNVSPAP
QLYPTTSRPHQHCPQGTTAREPTPPSYHQTEPTEQEPHNPYPTEPSPYENSWPPVAYYTT
RPAVTLPSCVNYFRSRGYDVEFRDGRFVVVKRESRRKRRQGQRTIPLQPGSLHQVILRPH
TPVEPIAWTGPGVVRVQDGAGLRFIVTNIPVTLNYHLVVRYEPQSTDDWTANVKIVSLGS
LDENCPFDPSEKTLTLPSTSRAAMLDPSVCLSSGVQYYVDITFENPDPDCSSHILIDSMG
LIPKLESLPNFCSDASLAQYQQHHCVELGARAGEHTPPEVCANLIASMSAYIHNGAIPCR
CNPVGSFSSSCSKFRGQCDCKPNVVGRCCDTCASFTYGFGQNGCSPCNCEPSGSKAEFCD
HKTGQCQCRDGVTGRRCDGCLPGYYGFPNCRPCQCNGLADRCDQSTGVCLNCREHSTGSH
CERCVEGYFGDPAVRETCKPCLCPDVKGSGRFFAHSCRKDPNSRTLICHCKTGHQGLHCD
KCAPGYYGNLLLPGASCKECPCNNNINPHDGEACDALTGKCLRCLHNTFGPQCQTCKPGY
YGNALLQDCKECSCNRQGTDVTKCPLGRPCICDEVTGQCPCRHGAAGVRCNHCEDGYWDL
NGKAGCQPCNCHTGHSVSNLCDKVTGQCPCETGYGGKQCKECAANHFGNPDIQCIFCDCN
MQGSIYPGCDPDTGECLCRPGVSGNFCEKCAPEHDPVFPACEPCHPCYHLWQSNVTDISQ
AMKNMQSWLSKHGGNLLLSNKRHQEKIQMLNEKLTSLVSMLSTDEVDLGNIENFLNEIRN
LTETTDPNTIIIDPSQLLETEIDNIYQEFKRLLDNLQKKIKDAQKIDLKEMNEMLEKIRN
LHSDFLKDEERVKKVKNKLDASRQTREDTKKELAKCQLRPLDVLEKKVKELSVAKLNEEI
CGTPGDAECEKAVCGGALCGKCGGPSCTGSLPVALNATDIAKKIRAGIQSLLQNLTEAET
KIKDIENINKDVKNKAQYMMNKIINSKNKFEKAKNDTKNLIESVREYLRAETMEPGDIDK
VASAVLAIKPPSSPDEIKRMIEDIQKIMENYTHITEDLKDLEDKAQLAKDLKNKADEILN
RSKGIDVSDVEKAMNDTAQLHDKIKQKLNKTKDNQNITAELLDKSDTKLKNAEDNLNMSR
TKTLQEEIEALKNKTEMNRAQALEAKTAADAALANVTDTNKDLKEVEDLLKKLKNNTQGQ
NDTITEHLKNITMEAENMAKDVETKMKQIEVLEKRIQNALQNKMNKTKELEDLLVEAMSL
KEYIVEKVSNYSQCAT
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaagcgctgcagatagtcagacagttaatgaactgcatctgctggaattttta
tcagtgcctacaaatgccaaagcaacaatgtgcagaaggtggatgtctgtagtcctgctc
ctttttctagtggtgccagctcacttccaggaagaatgtgagtggagctcatgccacccc
accctaggtgatcttatggtgggccgtgctgctcaactctctgcttcatccacctgtggt
ctaactggaccccagaactactgcatcctgggatacctggaggatgaacagaaatgtttc
acgtgtgattcaaggagcccctacaatcgagacaacaatcctaacagccatcaaatcgaa
aatatcattaccacctttgagccagagcacaagatgaaatggtggcagtctgagaatggt
gtgcatcaagtcagcattcaactggacttggagactatgtttcagtttagtcatttagta
atgacatttaagagtttcagacctgctgcaatgctggtggagcggtcaaaggattttggt
cgtacttggaaggtgtttcgatacttctcggcagactgtcctaccaactttcccagaatc
tccactggaccagcaaaaacaatagatgacctcatctgtgacagccgctactctggagct
gagccttctactgatggcgaagtggtgttaaaggctttggaccccacctttcaaattgaa
aatccatctgaccctaccattcaagagctcatctccatgactaacctgcgagtgaacttt
acacgtttactcacactgggtgatgacttgttggggcggaagagaaggaatccacaggag
aaatactactatgctctctatgagatggtggtcagagggagctgcttctgcaatggccat
gccagtcagtgcatgcctgtttataatgcgcgcggagataccttgaatgaacctggcatg
gttcatgggcgatgtatgtgtcaacataacaccatggggaaccactgtgagaagtgccag
gatttttacaatgatgccccctggaggccagctggaagcactgacccacatgtttgcaga
aggtgcaactgtaatggccactctgagagatgtcactttgacctacagcgctacataacc
actgggcaagtcagtggtggcgtgtgtgatgactgcagaaacaaccgcataggtgttgag
tgtgagctgtgcaagccatattactaccaggaccctctgcgttctctaaatgatccttat
gcctgcataccttgcacctgccactctgcagggtctgtggatggtaggttgtgtgatcca
gtgagtggtagatgtgtgtgtaagcagaatgtagaaggtgagcgctgtgaccggtgcaag
actggatactatagactcagccaggaagaccccagtggctgtcagaggtgtatgtgtaac
ttcttgggcactataagcacctccccatgtgaccagaacacaggccactgtaattgtgac
cactttgcccatggaccagagtgtaaccagtgtgtaccaggatactggggactaggaaat
acagtctatggttgtcaaccttgtgactgtgacataggaggagccttcagtactctgtgc
atctcagagaatggacagtgtcaatgcagagccaacatggtgggaaatcgctgcagtgaa
ccagctcctgggtacttcctggcccctcttgatttctatctctatgaagctgaaaatgct
tttcctttggacaccagatgttccacttacctggttagacccaatgtttcccctgcaccg
cagctgtatcctactacatctcgtccacatcaacactgtccccaaggaaccacagctcgt
gagcctacaccaccgtcttatcaccaaactgagcctacagagcaggagcctcacaacccc
taccctactgaaccttctccatatgagaattcttggcctcctgtagcatattacactaca
cgtcctgctgtcactctgcctagctgtgtgaactacttcagaagcagaggctatgatgtt
gagttcagggatgggagatttgtggtggttaagcgtgagagccgccgaaaacgaagacaa
ggccagagaaccattcccctgcagccaggatccctccatcaggtcattctacgaccacat
acaccagttgagcctattgcttggactggaccaggagttgtgcgggttcaagatggagca
ggactccgattcattgtcaccaacatcccagtaactcttaactatcatctcgttgttcgc
tatgagccacagtccacagatgattggacagccaatgtaaagattgtgtcattaggatct
cttgatgaaaactgtccatttgatccatcagagaaaactttaacacttccaagtactagc
agggcagccatgttggatccttctgtatgtctcagctctggtgtgcagtactatgtggat
atcacatttgaaaatcctgaccctgactgcagctcacatattctaattgattctatgggg
cttattccaaagttggagtctctgccaaatttctgctctgatgcatccctggctcagtac
cagcagcatcactgtgtggagttgggtgcacgggcaggagaacataccccacctgaggtg
tgtgcaaatctgattgccagcatgtcagcatacatccataatggcgcaattccttgtaga
tgtaatcctgtggggtcttttagctcatcctgcagtaaatttagaggacagtgtgactgc
aaacctaatgtggttggccgctgttgtgacacctgtgcatctttcacctatgggtttgga
caaaatggttgctcaccctgtaactgtgagccatcgggctccaaagctgagttctgtgac
cataaaaccggacagtgccaatgccgtgatggggtcacaggccgacgatgtgatgggtgt
ctgcctggatactatggttttcctaactgcagaccttgccagtgtaatgggctggctgac
cgctgtgaccaaagtactggtgtctgtctaaactgcagggaacattcaactgggtcccac
tgtgaaaggtgtgttgaaggttactttggtgatccagcagtaagggaaacctgcaagcca
tgcctgtgtccagatgtgaaaggcagtggccgtttctttgcccactcctgcagaaaggac
ccaaattctcgaaccctgatctgtcattgcaagacggggcatcaaggcttacactgtgat
aagtgtgcacctggttactatggtaacctgcttttgccaggtgctagctgcaaagagtgt
ccatgcaacaacaacatcaatccccatgatggtgaggcatgtgatgctttaactggcaag
tgtctccgctgcttgcataacacttttgggcctcagtgccagacctgtaaaccaggatac
tacggcaatgcactactccaggactgcaaagaatgctcatgtaaccggcagggcacagac
gtgactaaatgcccactgggccgcccctgtatatgtgatgaggtgaccgggcagtgccca
tgccgtcatggtgcagcaggagttcggtgtaatcattgtgaggatggatactgggatttg
aatggaaaggctggatgtcagccttgtaactgtcacacaggccactctgtcagtaatctg
tgtgacaaggttactggccagtgtccttgtgaaacaggatatgggggtaaacagtgcaaa
gaatgtgcagctaatcattttggaaaccctgacattcagtgcatattctgcgactgtaac
atgcagggctcgatctacccaggctgtgatcctgacactggcgagtgtctgtgccggcct
ggagtaagtggcaatttctgtgaaaagtgtgccccagagcatgatccagtcttccctgcc
tgcgagccctgccacccttgttaccatttatggcaaagtaatgtcacagacatctcacag
gctatgaaaaacatgcaatcctggctctctaaacacggaggaaatctgttactcagcaac
aagcgacaccaggaaaagatacaaatgttgaatgagaagcttacgagcctggttagcatg
ctaagcactgatgaggttgatctgggaaacatagagaatttcctgaatgaaatcaggaac
ttaacagaaaccacagatccaaacacaattattatcgatccatctcagctgctggaaact
gaaattgataacatttatcaagagttcaagaggttactggacaatctgcaaaagaaaatt
aaagatgcacaaaaaatagatctaaaagagatgaatgaaatgctggagaagatccgtaat
ctccattctgacttcctgaaagatgaagaacgggtgaagaaggtgaaaaataagttagat
gcttccaggcagaccagagaggacactaaaaaagaactagccaaatgccagctgaggccc
ttggatgtattggagaagaaggtcaaagagctcagtgtggccaaactcaatgaggagatt
tgtggaacaccaggcgatgcagagtgtgaaaaggctgtgtgtggtggtgctttgtgtggg
aagtgtggtggtccatcttgtaccggaagtctacctgtcgccctcaatgccacagacata
gcaaagaagatcagagcaggcattcaaagcctgctccaaaatctcacagaggcagaaaca
aagatcaaagacatcgaaaatattaataaagatgtgaaaaacaaggcacagtacatgatg
aataaaatcatcaatagcaaaaataagttcgaaaaggccaagaatgacaccaaaaatctt
atcgagagtgtcagggaatacctcagagcagagacaatggaaccaggagacattgacaag
gtagcctctgctgtgttggctattaagcctcctagttctccagatgagatcaagaggatg
atcgaggatattcagaaaataatggaaaattacacgcacattacagaagacctgaaggac
ttggaagacaaggcccaattagccaaagacttgaaaaataaagctgatgaaatcctaaac
agaagtaaggggattgatgtcagtgacgtagagaaagccatgaatgacacggcccaactc
catgacaagataaagcagaagctaaacaagaccaaagacaaccaaaatattactgctgaa
ttacttgacaagagtgacacaaaactaaagaatgctgaagataatttaaacatgtctcgg
accaaaaccctccaagaggaaattgaggctctgaagaataaaacggaaatgaatcgagct
caagctttggaggcaaaaactgcagctgatgcagcattagccaatgttacagacactaac
aaggatctcaaggaagtagaagacctgttaaaaaaactgaaaaacaacactcagggtcaa
aatgatacaataactgagcacctgaagaacataacaatggaggctgaaaatatggcaaaa
gatgtggaaactaaaatgaagcaaattgaagtcttggagaaaaggattcaaaatgcatta
caaaataaaatgaataaaacgaaagaactggaggatctgttggtagaggcgatgagcttg
aaggaatatattgttgaaaaagtgagcaattattcgcagtgcgccacctaa
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