Neoarius graeffei (lesser salmon catfish): 132881948
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Entry
132881948 CDS
T10798
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
132881948 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ngra04812
]
132881948 (lsp1a)
Cytoskeleton proteins [BR:
ngra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
132881948 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
132881948
NCBI-ProteinID:
XP_060771027
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All DBs
Position
2:80888804..80918729
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AA seq
591 aa
AA seq
DB search
MSSAILRRNSSKQGLQNLLRVTAQRSIEDAEEIERERRRRAREALRKEHSITGSPQDSSG
PTEECLFESELKPSSSGTLEEDEGFSDWTQRLERGRRVRQEENDPREEDMEVERTMNGGS
RREEICSTALNQQYRGQGEVEEAVDYMPGRKSSEKCMLFGEKAGSLRTRETPEWKEDFIR
INKRQEEEPHVEDKVKEVRKEVKVSYTSKVFLQQDRTPSTNNEDPAGEEVTSHLLKSRKT
TSRIIGQGSELREQAEACLETEQKLEKIRRSHQEKESQELEQLRQRQAEAEVELEELKKR
REERRRVREEEERRKEEEEQQRLAKEEEEKRQMKEDIERRRMEAAERRMKSLNMSSFDGD
ESFNPLSPKSPTFKREHEERLTAESTCSEQGKNCIMDRTESLNRSLKKSNSFKKTQPPLL
LSKIDDKLEQYTHAVESSSKDPKTPKSTVVDMPSVPEPVVAKKNLFEAGEAWNQGMAKGT
SSKDTDGLKVGVAGLITQWVKGSPDGGNRYAQSRPCDVKTGDVLQKKNMWEIIGEGSATD
RSGQAGKGISSGKRYKFVVTGHGKYEKISIDDDHYSDYPNGKSRDLCHNDL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgcaatcttgagaagaaactccagcaagcaaggcttgcagaacctcctcaga
gtgactgctcagcgcagtattgaggatgcagaagagattgagagggagcgacgacgcagg
gcccgagaggctctcagaaaggaacacagtatcaccggctctcctcaggatagctctgga
cccactgaggagtgtctctttgagagcgaactgaaacccagcagctctggaacactagaa
gaggatgaaggtttcagtgactggactcagaggttggagaggggaagacgggtcaggcag
gaggaaaacgaccctagagaggaggacatggaggtggaaagaaccatgaacggaggaagc
agaagagaggagatctgctccactgcactaaatcaacagtataggggacagggtgaagtg
gaagaagcggtggactacatgccaggaaggaagagcagtgagaagtgcatgctgtttgga
gagaaggcaggcagccttaggaccagagagacaccagaatggaaggaagatttcatcaga
attaacaagagacaagaggaggagccacacgtggaggataaggtgaaagaagtgagaaaa
gaagtgaaggtctcatatacatctaaagttttcctgcagcaagatagaacacccagcacc
aacaatgaggatcctgctggagaggaagtgacatcacatctgctcaaatctagaaagact
acaagcaggatcataggtcagggctcagagttgagggaacaggcagaggcctgtctggag
acggagcagaagttggagaagatccggcggagccaccaggaaaaggagagtcaggagctg
gagcagcttcgccagcggcaggctgaggctgaggtggagctggaggagctcaagaagagg
agagaggaacgcagaagagtgcgtgaggaagaggaacgcaggaaggaagaggaagagcag
caacgtcttgcaaaggaggaggaggaaaaaaggcagatgaaggaggatattgagaggaga
aggatggaggcagctgaaaggaggatgaagagcctgaacatgtcctccttcgatggggat
gagtcattcaaccctctcagtccaaaaagtcccactttcaagagagagcatgaggagaga
ttgacagctgaaagtacatgctcggagcagggcaagaactgtatcatggacagaacagag
tccttgaatcggtccttaaagaaaagcaacagttttaaaaagacccagccaccactactc
ctgtccaagattgatgacaaactggagcagtacactcacgctgtggagagctcgtcaaaa
gatccaaagacccccaagtcaactgtagtggacatgcccagtgttcctgaaccagtggtt
gccaaaaagaacctgtttgaggcaggagaggcctggaaccagggaatggccaaaggaact
tcatcaaaggacaccgatggactgaaagtgggtgtggctggtctgatcactcagtgggta
aaaggaagcccagacggtggcaacagatacgcacagtccagaccatgtgatgttaaaaca
ggagatgtgctccagaagaagaacatgtgggagatcataggggaaggatcagcaaccgat
cggtcaggacaagcagggaagggcatctcttctggcaaacgctacaagtttgttgtgacc
ggccatggcaaatatgagaagatttccattgatgatgaccattacagtgactatccaaac
ggaaaatcaagggacctgtgccacaatgacttgtaa
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