Neoarius graeffei (lesser salmon catfish): 132881975
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Entry
132881975 CDS
T10798
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra04620
Toll-like receptor signaling pathway
ngra04621
NOD-like receptor signaling pathway
ngra04622
RIG-I-like receptor signaling pathway
ngra04623
Cytosolic DNA-sensing pathway
ngra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
132881975 (irf7)
04621 NOD-like receptor signaling pathway
132881975 (irf7)
04622 RIG-I-like receptor signaling pathway
132881975 (irf7)
04623 Cytosolic DNA-sensing pathway
132881975 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132881975 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ngra03000
]
132881975 (irf7)
Transcription factors [BR:
ngra03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
132881975 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
132881975
NCBI-ProteinID:
XP_060771087
LinkDB
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Position
2:complement(85001761..85014338)
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AA seq
436 aa
AA seq
DB search
MAIMNSAGRPQLGQWLLEQVQSGRYGGLYMLDRDTFRIPWKHNSRKDCGDEDNRIFREWA
VVSGKINEYPNDKAKWKTNFRCALNGLTQFKMIHDNSKDLENPHKIYRIVRPEKHQQCSN
SNPQQCSNIQIKAMYSSTNSQCEEMEYDLPNHMDTLHLNQQPTEIQYWQPYQQPIQNLAG
HTNYGVPQMPVVPVPQHCLPNNMPASAPILAQLPYNTVHQSLIMHSINDLEISIHYRRTE
MLKVQCVGPRIQLHSQCDQSELRGVSVPFPSTEELIDHKQIQYTKRLLDNIKRGLLLEVF
PSGIYGFRQDKCNVFISTCDPAEIQNPEPRKLLQNQNELLFSFDKYKKDLMDFKENKRGS
PEYTIYLCFGEKFPDGKPLERKLIVVKVVPLICRELHKAAQLEGASSLQNDNISLQLSHN
SLFELIEATFSPPPAV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcaataatgaacagtgcagggagaccgcagttgggacagtggctcctcgagcaagtg
cagtccggacggtatggtggactttacatgctcgacagggacacattccgcatcccgtgg
aaacacaactcgaggaaagactgtggagacgaggacaaccgaatattccgagaatgggct
gtggttagtggtaagatcaatgagtatcccaatgacaaggcaaagtggaagaccaacttc
cgctgtgccctcaacggccttacacagttcaagatgatccatgacaactccaaggacttg
gagaatccccataaaatctaccgtatcgtccgtcctgaaaaacatcagcagtgctcaaat
tcaaatcctcagcagtgctcaaacattcaaattaaagcaatgtacagctccacaaacagc
caatgtgaagaaatggagtatgatttgccaaaccatatggataccttgcatctaaatcaa
cagcccacagaaatacaatattggcaaccctatcaacaacctatccaaaacctagcaggt
cacaccaactatggtgttccccaaatgccagttgtaccagtaccgcagcattgccttccg
aataacatgcctgcttcagcaccaattttagcacagctaccctacaatacagtgcaccag
tctttaatcatgcattctatcaacgacctggagatctccattcactacaggagaacggag
atgctgaaggtgcagtgtgtaggtccacgcattcagctccactcacagtgtgatcaatca
gagctcaggggcgtgtccgtgcccttccccagcacagaggagctcattgaccacaaacag
atccagtacactaagcgtctcctggacaacatcaaaagaggtcttctcctagaggtcttc
ccctcaggtatctacggcttccgccaggacaagtgcaatgtgttcatcagcacctgcgat
ccagccgagatccagaacccagagcccagaaagctgctgcagaaccagaatgaactgctg
ttcagcttcgacaagtacaagaaagatctcatggacttcaaagagaataaacgtggctct
cctgagtacaccatctatttgtgctttggggagaagtttccagatggaaagccactggag
aggaagctgatcgttgtgaaggtcgtgcctctgatttgtcgcgagttgcataaggcagca
cagctggagggagcgtcgtctttgcaaaatgacaacatcagcctgcagctctcccacaac
agcctgtttgaactgattgaagccactttctcaccacctcctgctgtatag
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