Neoarius graeffei (lesser salmon catfish): 132881980
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Entry
132881980 CDS
T10798
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ngra03016
]
132881980 (elp1)
Transfer RNA biogenesis [BR:
ngra03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
132881980 (elp1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR35_TULP_N
Beta-prop_EML_2
Beta-prop_WDR19_1st
WD40_CDC20-Fz
Beta-prop_NUP159_NUP214
TPR_GEMI5
nec1
PQQ_2
Motif
Other DBs
NCBI-GeneID:
132881980
NCBI-ProteinID:
XP_060771093
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All DBs
Position
2:85514255..85600281
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AA seq
1321 aa
AA seq
DB search
MRNLKLLKCVCMSELQSPGSPQCVSVRIDTDTMLIASHFSITELEPRTGQVVNEVSLTME
NYLPEDGSGVIVGIQDLPDQESVCVATAQGDVILWNLNTNQLECVGSVDSGLTAMSWSPD
QELATFCTGQETIILMTKDFEPITEVAIHQDEFGEGKFITVGWGKKETQFHGSEGKQAAQ
RKAAEVQPAVPWDDRIPRITWRGDGQLFAVGAICPQTGARKVRVWNRECVLQATSEVING
LEEALCWKPSGSLIACTQRLPNKYSVVFMEKNGLLHGDFTLPFAKDQVKVKELLWNSDST
VLAVWLEDLSPGLNSNPNTYIQLWTVGNYHWYLKQSLHFGSEPSKAPVCVCWDPVKPLHL
RLLTHDWSCYTYDWGWSTDRSQGYDSHDHANVAVIDGDKVLVTAFRQSVVPPPMCSCELQ
FPAPVNLVTFHAQPPSTNALAALTADGCLHIAGRGGEDASEPVKDASGFRVVSKPLVLQK
TYSVAVAREGVLALRLLLWLKEDVFVAVACGDELNQSRLLMLTPAETQSSEPRLDVRSEV
KVEGHVINMCHSSKSDTLALQLEDGQIRRVKWDSSEITVSEWKDSSGFSVNFPQPCVHTA
LCTINGEEYLAGLTERSHLYIGNSAVASNISSFVVYDEFLLLTTYTHTCCCFHLTTMSIN
DVQVALSSEASQNDESVRRVERGSRIVTVVPQDTRLILQMPRGNLETIHHRALVLAQVRK
CLDDLKFRDAFECMRKLRINLNLIYDHNPSVFLENVELFLKQIASVNYINLFLTELKEED
TTKTMYPCPVNSSVTSRGGQGKRKVDTVCDALRSAMETLDPHKYCLCILTSHVRKTTPEL
EIALQKVHELRVNPPSAENAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAEKSQ
KDPKEYLSFLNMLKTLEPNYQRYTIDKHLKRYKKALHHLRKCGEEHFTELVNLVKDQKLY
TEALQLYPADSQQYKALSVAYAEHLLEDQEAEQAGLLLWRCGEMPRALQAFITCTSWRHA
LTVATHIPVPPTQLTQLARDLAEKLLEMRRHMEAALLLEQYAKDCEEAISALIEGAAWEE
ALRLIYLYNRPDLIETNLKPALLEAHSTQMAFVDSQRALFTRHKNRLAVVREQKEKARLE
FADEDGPDCADAELYSEASSILTGSRLGSKYSHSNSRVSSRSSKNRRKAEGKKHSLKEGS
PFEDIALLHAIIQIIHVVDKMREEIHNLLKALVLFQFDKLASSLQSDYSELLQLIETGIP
EIWHEGLQQSQTPITGPNSTVNSIMASFQQPRPATVPQQDAAILTPPKMRQSVKWKLSIL
Q
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctaaagctgctgaaatgtgtgtgcatgtcggagctgcagagtccaggctct
cctcagtgtgtttctgtgaggatagatacagacaccatgctaatcgcctctcacttctcc
atcacagagttggagccccggacaggccaggtagtgaatgaagtgtctctaaccatggag
aactacctcccagaggatggcagtggtgttattgtgggtattcaggatctacctgatcag
gaatctgtttgtgtggccactgcgcagggagatgtcattctgtggaaccttaacactaat
cagctggagtgtgtaggaagtgtggatagtggactcactgccatgagttggagtccagac
caggagctggcgacgttctgcacaggtcaggagacaatcatcttgatgactaaagacttc
gagcctataactgaggtggccattcaccaggatgagtttggagaaggtaaattcattacc
gtaggttggggtaagaaggagacgcagtttcacggctcagaggggaagcaagcggcacag
aggaaagcagcagaagtgcagcctgcagtgccgtgggatgaccgcataccaaggatcaca
tggagaggcgatgggcagctctttgcagtcggtgccatctgtccacagacaggggctaga
aaagtcagagtgtggaatagagagtgtgtcctgcaggccactagtgaagttatcaatggc
cttgaagaagctctgtgctggaaaccttcaggtagcctgatagcctgcacccagcggctc
ccaaacaaatacagtgttgtgtttatggaaaagaatggcctgctgcatggagactttact
ctgccctttgccaaggaccaggttaaggtgaaggagttgctttggaacagtgactccact
gtgctggctgtttggcttgaggatctgagcccaggactgaacagcaaccccaacacatac
attcagctatggacggtagggaattaccactggtatctgaaacagagtctgcattttgga
agtgagccctcaaaggctccagtctgtgtgtgttgggaccctgtgaagccactccacctc
cgcctgctgactcatgactggagctgttacacatatgactggggctggagcacagatcgt
agccaaggatatgattcacatgatcatgccaatgtggcagtgattgatggagataaagtt
ttagtgacagcgtttcgtcagagtgtggtgcctccacccatgtgttcctgtgaactgcaa
tttcctgctcctgtcaacctggttacttttcacgcacagcctccgagtaccaatgcactt
gcagcgttaacagcagacgggtgtttgcatatcgctggcagaggcggtgaagatgccagt
gagcctgttaaggatgcatctggatttagagtcgtttctaaaccactggttttacaaaag
acgtacagtgttgcagtggcccgtgagggggttctggctctccgtctgctgctctggctg
aaggaggacgtgtttgtggccgtagcatgtggagatgaactaaaccagtcgcgtctactc
atgctgaccccagcagagacccagagctcagagcccagactggatgtcaggtcagaagtc
aaggttgaaggtcatgtgatcaacatgtgccacagctctaagagtgacacattggctctg
cagctggaggatggacagatcaggagagtgaaatgggactcttcagagataacagtgagt
gaatggaaggattcttcagggttcagtgttaactttccccagccctgtgttcacactgca
ctgtgtaccatcaacggagaggagtatttagcaggtctgacagaaagatcccacctctac
atcggtaacagtgcggtcgcttcgaatatttcctcctttgtggtgtatgatgagttcctc
cttctcaccacgtacactcacacttgctgttgcttccacctgaccacaatgtcaatcaac
gacgtgcaggtggctctgagttcagaagcatctcagaatgatgagagtgtgcgcagggta
gagagaggatctcgcatcgttaccgtggtgccccaggacaccagactcatcctacagatg
ccccgtggtaacctagagaccatccatcatcgagcgcttgtgctggctcaagtcaggaaa
tgtcttgacgatctgaaatttagagatgcttttgaatgcatgaggaagctgcggatcaac
ctgaacctaatctacgaccacaatcccagcgtgttcttggagaatgtcgagctgtttctg
aaacagattgcctcagtcaattacatcaacctttttcttacagaactcaaagaggaagat
actaccaagacgatgtacccgtgtccagtgaattcttcagtaacatcgagaggtggtcag
gggaagaggaaagtagacactgtctgtgatgctctgcgatcagccatggagactcttgat
cctcataaatactgcttgtgcattttaacatctcatgtgaggaagacgacaccagaactg
gaaattgctctacagaaggtccatgaattgcgtgtgaacccacccagtgcagaaaatgca
gtgagtgcagaggaggctctgaagtatctcttgttcctggtcaacgttaatgagctgtat
gaacactctctgggaacctacgactttgacctggtgctcatggtagccgaaaagtctcag
aaggaccctaaagaatatctttccttcctaaacatgctgaaaaccctggaacctaattat
cagcgatataccatagacaaacacctgaagagatacaagaaggccttacatcacctcagg
aagtgtggtgaggagcacttcactgagttagtaaacttggtgaaggatcagaagctgtac
actgaagctctgcagctctaccctgcagatagtcagcaatataaggcgctaagtgtggcc
tatgctgaacacctgttggaggatcaggaggctgagcaggcagggttgttgctatggcga
tgtggagaaatgccccgtgctttgcaggccttcatcacttgcaccagctggagacacgcc
ctcaccgtggcaacacacatccctgtaccgcccacacagctgacacagctcgcacgagat
ctagcagagaagcttctggaaatgaggagacatatggaagctgctctgctgctggagcag
tatgctaaggactgtgaggaggccatttctgccctgattgagggcgctgcatgggaggaa
gctctcagactaatttacctttacaacagaccagacctcattgaaaccaatctgaagcct
gcgctattggaagctcacagtactcagatggcctttgtggactctcagagggctctgttc
acgcgccataaaaacagactggctgttgtgcgagagcagaaagagaaggctagactggag
ttcgctgatgaggacggccctgactgtgcagacgctgaactctactcagaggccagcagc
atcctgaccggcagccgtctcggatcaaagtactcgcacagcaactcccgcgtctcctcg
agatcatctaagaaccgcaggaaagctgaaggaaagaagcacagtctgaaggaaggaagc
ccctttgaggacattgcccttctccatgccattatccaaatcatccatgtcgtagacaag
atgagggaggagatccacaacctcctgaaggcactggtactgtttcagtttgacaaactg
gccagcagcctgcagtcagactatagtgagctgctccagctcatcgaaacgggcatccct
gagatctggcacgaaggacttcaacaaagccaaactccaatcacaggacccaattcaaca
gtcaacagcattatggcttcgtttcagcagcccagacctgccacagttccccagcaggat
gcagcaatcctcacaccacccaagatgcgccagtctgtcaaatggaagctctcaatccta
caatag
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