Neoarius graeffei (lesser salmon catfish): 132882015
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Entry
132882015 CDS
T10798
Symbol
spock1
Name
(RefSeq) testican-1 isoform X1
KO
K08136
testican
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ngra00535
]
132882015 (spock1)
Proteoglycans [BR:
ngra00535
]
Extracellular matrix (ECM) proteoglycans
Others
132882015 (spock1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
132882015
NCBI-ProteinID:
XP_060771170
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Position
2:89985932..90685115
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AA seq
478 aa
AA seq
DB search
MLCVLLLPIAAFLLRAEAAVGIININNNNNNNGDAADTDKWISDKDKYWSRFRDDDYFRT
WGPSKAQDKESENRPRRHGEPGSKTHPVQAKWRTDDGLDMTKDPCMNVHCPPHKACVSHD
HQTAICTNHKPPQHSIRPRKGSHLRKQWMGANNHGKCKPCPIVHPRPVCGSDGHTYTSKC
KLEFQACISGKSILAKCEGPCPCLPGQEVFKPHAERNGRHETLRGDMELYACTDADLKSL
ASRLKDWFGVLHMDANRDLKISASDNGQGRFDTSILPICKDSLGWMFNKLDMNYDLLLDQ
SELSAIYLDKYELCMRPLFNSCDSFKDGKLSNNEWCYCFQKPDGLPCQNEINRIHTQSRR
KSLIGAYVPRCTEDGYFKATQCHSSTGQCWCVDKYGNEIAGSRKQGNPICEEDQETSGDF
GSGGAIILLDDQEEEEEEPPQNRRRRQKEKRGRLRPRGAIEDDEDEEDDKEDEIGYIW
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgtgctgctgttaccgatcgccgctttcctgctgcgcgcggaggcggcggtc
ggcatcatcaacatcaacaacaacaacaacaacaacggggacgcggcggacacggacaag
tggatcagtgacaaggacaagtactggagcagattccgtgacgatgattacttcaggacc
tggggcccaagcaaagcacaagacaaagagtcagagaataggcccaggagacatggggaa
ccagggtccaaaacacatccagtgcaggctaaatggaggactgatgatggtttggacatg
actaaagatccttgtatgaatgtgcactgtcctcctcacaaagcctgtgtgagtcatgac
caccaaacggccatctgcaccaatcacaaacctccacagcacagcattaggccaaggaaa
ggcagtcatctccgtaagcaatggatgggagcaaataatcatgggaaatgtaaaccttgt
cctattgtccatcctcgtccagtgtgtggctcagatggtcatacctacacttcaaagtgt
aagctggagttccaggcatgtatttcaggaaagagcattttagcgaagtgtgaaggacca
tgtccctgcctgcctggacaggaagtcttcaagccacacgctgaaaggaatgggagacat
gagacgttgaggggagacatggagctttacgcttgcactgatgctgatctgaagagtttg
gcgtctcgactgaaggactggttcggtgtgctgcacatggacgccaaccgagatctgaag
atttctgccagtgacaacggtcaaggacgttttgacaccagcatcctccctatctgtaaa
gactctcttggttggatgttcaacaagttggacatgaactatgacctcttgctcgatcag
tcagagctcagcgccatttatctggacaagtacgagctgtgtatgcgcccactcttcaat
tcctgtgattcctttaaggatgggaagctttccaacaatgagtggtgctactgcttccag
aaaccagatggtctgccctgtcagaatgaaataaataggattcacactcaaagccgacgg
aagtctctcataggagcatatgtcccacgctgtacggaggacggctactttaaggccaca
cagtgtcacagtagcacaggccagtgttggtgtgttgataaatatggcaatgagattgca
ggctccaggaaacaaggcaacccaatctgtgaggaggatcaggagacctcaggggatttt
ggcagcggaggagccatcattcttcttgatgaccaagaggaggaggaggaggagcctcca
cagaacaggcggcgcagacagaaggagaagcgaggcaggctccgcccccgcggggccatc
gaggatgatgaagatgaagaggacgacaaagaagacgagattggctacatctggtag
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