Neoarius graeffei (lesser salmon catfish): 132882108
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Entry
132882108 CDS
T10798
Symbol
zc3h12ab
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132882108 (zc3h12ab)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
132882108 (zc3h12ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
132882108
NCBI-ProteinID:
XP_060771344
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All DBs
Position
2:complement(111215962..111249197)
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AA seq
628 aa
AA seq
DB search
MSIGVNVIPTAFPPVLDPYLWPDNCSTTCVSSFIHTDALTWASSSCPSTLFVKMEQTQPE
EQADLSTEFQPQLDLFRKLGFSDVQVRAVLLKLGLHTDTDRILGELIQMRAAGMEGSVGS
PALVPHGESQRKNHSVSSLPAEQDDTDQDEDALKPIVIDGSNVAMSHGNKEVFSCLGIQL
AVKYFLDRGHTDVTVFVPSWRREQPRPDVPITDQQILRELERKKILVFTPSRRVAGKRVV
CYDDRFIVKLAYDVDGIIVSNDTYRDLQGEKPEWKRFIEERLLMYSFVNDKFMLPDDPLG
RHGPTLENFLRKTPRATKKLPCPYGKKCTYGIKCKFSHPERGKQSQRSLADELREKAKMP
SSAQNLYLAGANSSHEASLEEVMEQKLLLNQSGPLKKTHTSENLLVVKNTQQSTSRKSPS
KRDRSSQYSPTNPDCISASSQEYLDSGLGSYECHSEHQCGGEQRKSKNPSNRRLRHPLTC
SQSLNQCNLQSNTGYHPQHMSIAASQNPNNMPYSYPHYHSYGGVPYPPGNFPQYSVPHEY
HHRSMPPPQSRYWSEDYRHFGHVPPGPVQGDGTLWNHPMPEREQVRKKLRAVFNARLVDR
AMEMFPNIMDPQKLAVEIINLQSYEGVL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagtataggtgtcaatgtcattcctactgcctttcctccagttttggatccttatctt
tggcctgacaattgcagcaccacgtgtgtgtcctctttcatccacacagacgccctcaca
tgggcgtcttcgtcctgtccatccacactatttgttaaaatggaacaaactcagcccgag
gagcaagcggacctgagcacggagtttcagcctcagctggatctttttaggaagttgggc
ttctctgatgttcaggtccgagctgtgctgctcaaactgggcctccacactgacactgac
cggattctgggagagctgatacagatgagagcggcagggatggagggctccgtcggttct
ccagcgctggttccgcatggggaaagccagaggaaaaatcacagtgtttcatctctacct
gctgaacaagatgacacggatcaggatgaagatgccctcaagccaatcgtgatagacggc
agcaacgtagcaatgagtcatgggaacaaggaagttttctcctgcctgggaatccagctg
gctgtgaagtacttcctggatcgcgggcacacagacgttactgtgtttgtgccctcatgg
cgacgggaacagcccaggccggacgtgccgatcacagatcagcaaattctccgtgagctg
gaacggaaaaagattctggtcttcaccccatcaaggcgcgtggcaggaaagcgggtggtg
tgctatgatgatcgcttcatcgtaaagcttgcatatgatgtggatggcatcattgtgtcc
aatgatacctaccgagacctgcagggggaaaagcccgagtggaaacgtttcatagaggag
cggttgctcatgtactcttttgtcaatgacaagtttatgctcccagatgatccacttggg
agacatggacctactttggaaaactttctacgcaagactccccgagcgactaaaaaactc
ccctgcccctacggtaagaaatgcacctatgggatcaagtgcaagttcagccatccagaa
cgtggcaagcaatcccaacgttccttggcagatgagttgcgtgagaaagccaaaatgccc
tcctctgcccagaacctgtacttggcaggtgcaaattcttcccatgaagcctctctggag
gaagtgatggagcaaaaactccttttgaatcaaagtggacccctcaaaaagacccatacc
agtgagaatttgctggtggtgaagaacacacaacagtctacttcaagaaaatccccttca
aagcgagatcgttccagccaatattccccaacaaatccagattgcatctctgcttcttct
caggagtacctggactccggtctgggctcatacgaatgccacagtgagcaccaatgtgga
ggagagcaaaggaagtccaagaatccttctaatagaaggttacgacatcctctaacttgc
agccagtctttaaaccaatgtaatttacaatccaatacaggttaccatccccaacacatg
agtatagctgcgtcccaaaacccaaataacatgccatactcgtacccgcattatcactcc
tatgggggagtaccttacccaccagggaactttccccagtatagtgtaccccatgagtac
caccacagaagcatgcctcctcctcaaagcaggtactggtccgaggattacagacacttt
ggccacgtacctccaggacctgtgcaaggtgacggcactctctggaaccatcccatgcca
gagagggagcaggtgaggaagaagctgcgagccgtttttaatgcccgtcttgtggacaga
gcaatggagatgttcccaaacataatggaccctcagaaactggctgtggaaatcatcaac
ctgcagtcctatgaaggggttttgtga
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