Neoarius graeffei (lesser salmon catfish): 132882237
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Entry
132882237 CDS
T10798
Symbol
nup42
Name
(RefSeq) nucleoporin NUP42
KO
K14321
nucleoporin-like protein 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132882237 (nup42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ngra03019
]
132882237 (nup42)
Messenger RNA biogenesis [BR:
ngra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132882237 (nup42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
132882237
NCBI-ProteinID:
XP_060771483
LinkDB
All DBs
Position
2:121971879..121983179
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AA seq
383 aa
AA seq
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MTVCSYFLEGRCRYGDKCWNEHPRGGRNHPNRGGGGSVNRVWVNPSHRSGGGMVQPSSFS
HGGGDWGRGSSGSGRDDQNFSFNTQNRFSTLSNTQSGYGRTGGGGDDTDKQLEVIQKDME
MWQSSGQWLFSCYSILKASITGFVELSPEELRMEYYTSRATGDLQSYVNSVQQLANQWRS
RVQELRSMSANTRTAMIAELNNPRVAQASSGGGIFSSSASTGFGSSAASTGFGSSTSGFR
VGGFSSNVQSSAAGFSFSASNPGFGSSGAQPASSGFGSSAPSASTFSFAAPVGATASKSS
ATGFSFSSAAAGGFSSSSTAPAGGGFGGGASVTGSTEDRKSGGDSLYTAQSELSEDELRE
FTAKRFTLGRIPLRPPPAELLTV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggtgtgtagttactttctggaagggagatgtcggtatggagataaatgctggaat
gagcacccgagaggagggagaaaccacccgaaccgcggcgggggaggctcagtgaaccgg
gtgtgggtgaacccatctcaccgctcagggggaggcatggtccagccctcatctttctcc
catggaggaggggattggggcagagggagcagcggatcagggagagatgaccagaacttc
agctttaacacacagaaccggttctccaccctgagcaacacgcagagtggatatgggaga
accggaggaggaggagacgatactgataaacagctagaggtgattcagaaggacatggag
atgtggcagagctcgggacaatggctcttctcctgctattccatcctcaaagcctccatc
acggggtttgtcgagctatctccagaggaactgagaatggagtactacaccagcagagcc
actggagacctacagtcttatgttaattcagtccagcagctggccaatcagtggagatcc
agagttcaggaactgagaagcatgagcgcgaacacacggaccgccatgatagcagagttg
aacaaccccagagttgcacaggcatcctcaggtggagggattttcagttcttcagcatcg
acagggtttggatcttcagcagcgtcgacagggtttggatcttcaacatctgggttccga
gttggaggatttagctcgaatgttcagagtagtgctgctgggttcagcttctctgcatcc
aatcccgggtttggatcatccggggctcagccagcttcatctgggtttggctcgtcggct
ccctctgcctctaccttctccttcgccgcgcctgtaggagcgacggcgagtaaaagctct
gccacagggttcagcttctcgtctgcggcggcaggaggcttcagcagctcatccactgct
cctgctggggggggatttggtggtggagcgagtgtgactgggagtacagaggacaggaaa
agtggaggagacagcttatacactgctcagagtgaactctcagaagacgagctccgagag
ttcactgcgaaacgattcacactgggacggattccactcagaccgccacctgctgaactg
ctcactgtctga
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