Neoarius graeffei (lesser salmon catfish): 132882575
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Entry
132882575 CDS
T10798
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Pathway
ngra02010
ABC transporters
ngra04148
Efferocytosis
Brite
Transporters [BR:
ngra02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132882575
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DUF4162
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
132882575
NCBI-ProteinID:
XP_060771651
LinkDB
All DBs
Position
3:complement(54626045..54966995)
Genome browser
AA seq
2237 aa
AA seq
DB search
MGLLVQLRLLLWKNFTLRKRQKLRLVIELIWPLFLFFILVWVRSTNHPVHKGQCHYLNKP
MPSAGVLPWLQGIVCNIQNPCISELTPGETPGQVNNFNDSIIAKALIEVQTLFMDSSLLS
SIKLLSDDMNKWTSILENFNTDKARPIPLRSVLKDNETLSEYLKSNLSVSSATARRLMSV
KLQLNQLPALSRETDLRSTLCNSSIDRFLEFNSTSQRQEFQNITCSLTSDQLQQTRAVLV
QNLDNQKLMAAVPLALNLNPADFATLLANTGAHAAPLANQVSKFQTTSIINDMDSLDFRS
NPFGSLTLFMCGGNSSSNTSRAKPVVQLPPQATFSVNSTSSKGNSSEFCQNLIDTLKGTP
ALRLFWTSLRPLLQGQILYTPDTPFTQQVMAEANSTFNALAKVGELADTWLENEDEIWNF
FQNSRQINMVRALLQNPLFSAILDQRLNGTRWSSALIANFLFNGDEKDRLAGMLAFDWRN
VFNTTSQVARLIKQVMECFNLDKFEAVASEKLLVERALELLDQEKFWAGVVFTDLDAGNP
SLIRYKIRMDVEETERTDKIKDRSWFPSARDNPFNDLRYVRGGFVYLQDMLDRAIVQTHT
GVKETLGVYLQQMPYPCYVDDAFVSSIATILPMFLVLTFIYTVCQTIKGLVLEKELRLKE
VLRVVGVGNGALWFSWFMENITVLTVPCTLISIMLKYGKVLRYSDPSVIFVFLLVFCIAT
VMQCFFISVFFSRANLAAACGGLIYFLLYLPHVLCYAWRDVLTFPIKLATSLLSCVAFGY
GCENFARYEEQGIGIQWNNIMLSSQDDDPYTFIVSIIMILIDAVLYWILTWYIENVFPGQ
YGIPRPWYFPLTSSYWCGTPAGVDVESDHLDALEEQNGYLEKPPANLKAGVSIRNLVKIY
KTGKKLAVDKLTLDFYQDQITSFLGHNGAGKTTTMSILTGLFTPTSGTAYINGFDIRKDM
DNIRKTLGMCPQHNVLFNDLTVEEHIYFYARLKGRSSKEVKQEIDQMIKDVGLPHKRKDL
AKNLSGGMQRKLSVAIAFVGGSNVVILDEPTAGVDPYARRGIWELLLKYKMGRTIILSTH
HMDEADILGDRIAIISHGKVCCCGSSLFLKKTYGSGYYLTLARANQDIMTSQRHTGCKQP
SDASSLDEGIGSASISTMEPADVADVSSVIRLHVPEAEFLEVIGQELVYVLPYASSKDGS
FASLFKELDLEREQLGISSYGISDTSLEEIFLKVAEETGVDVESNGKGEILQRDWKRSSK
ESKSRRMSWAMEHRDSTDSKQAEKKERFSNRVEDGQRPACVNGKGSYVITGWPLIRHQFL
ALFIKRFHHARRSRKGIIAQVVLPALFVCLSLIFSLIVPPFVEYPSLELQPWMYGKPQNT
FYSADRMDVDEAVRVTRALLSEPGFGTRCMDGNPIPKYPCTPLGATDWFTPSVDPVILEI
FKNGNWSMQNPSPDCQCSTPKRKIMLPDCPPGAGGLPPPQKTQNTTDTLQDLTGRNMTDF
LLKTYAKSGKIRYGGISVGAINSQVKLNESEIIVLLSDLKTFFNSSQNNITERFFQDLEI
LLVDLGTKDNVKVWFYNQGWHAIVSFLNVATNAILRGNLPAGVQPKLYGISAFNHPLNLT
KQQLTTTLMSSSTDVVVAICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPAAYWV
ANFTWDMCNYVVPCLIVIVIFLCFQQKAYVSPQNLPALVLLLVLYGWAITPMMYPASFVF
SIPSTAYVVLTCINLFIGINGSIATFVMELFNDTNITNINNIVKQVLLIFPHFCLGRGLI
DMAKNQAMATFFISLGEDRFEDPLSWNMVGKNLFAMTIQGVVMFGFTLLIQYKFFCKPRL
ITGLPRSAGEEDEDVARERERVQRGKAQNDLLRICDLTKVYSGKKVPAVDRITVGVPAAE
CFGLLGINGAGKTTTFKMLTGDIRPSGGEAFLNGYSIRTEMSQVHQNMGYCPQFDAIDDL
LTGREHLEFYARLRGVPEREVTMVAEWGIQKLGLVKYSNKSAGTYSGGNKRKLSTAMALI
GCPPLVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMVNG
QFKCLGSIQHLKSRFGDGYTVIVRVQGSPADLSAVEEFVTQTFPGSVLKEKHHNTLQYQM
PHKEGALSHIFSQFSRNQHTLGVEDYSVSQTTLDQVFVNFARQQHDAEDRVYENPVDLSD
EIPMQTHTQTYRIKTEE
NT seq
6714 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctggtgcagcttagacttctgctctggaagaacttcactttgcgcaaaaga
cagaagttgcggttggtaattgagctaatatggcctctgttcctgtttttcattctggtg
tgggtgagatccaccaatcaccctgtccacaaaggccagtgccactacctcaacaagccg
atgccctcagctggggtgttgccatggttacagggcatagtctgcaacatccagaatcca
tgtatcagtgagctaacacctggagaaacccctggccaggtcaacaacttcaacgactcc
atcattgcaaaagcattaatagaggttcagactctcttcatggactcgtccctgctgtct
agcatcaaacttctctctgatgatatgaacaaatggacgtctatccttgagaatttcaat
acagacaaagctcgcccaattcctttgcgtagtgtgctgaaagataatgagacactctcc
gagtacctgaagagcaacctgtcagtatcaagtgcaactgcccggaggctgatgagtgtg
aagctccaactcaatcagttacctgctctctcacgtgagacggacttgcgctccactctg
tgtaactcctctattgaccgcttcctggagtttaactcaacaagtcagagacaggaattc
cagaacatcacatgctccctgacatcggatcagcttcagcagaccagagcagttctcgtg
caaaatctggacaaccaaaaactcatggctgctgtgcctttagcactgaatctgaaccct
gcagattttgctactctgctggccaacactggtgctcatgcagcccctctggcaaatcag
gtgtctaaattccagacgacatccatcatcaatgacatggactctctggacttccgctca
aatcctttcggcagtttgactctgttcatgtgtggtgggaattcaagctccaataccagc
cgtgcaaagccagttgttcaattgccaccacaagccacattctcagtaaactcaacctca
tccaaaggcaactcaagtgaattctgtcagaatttgattgacactttgaaaggcacaccc
gccctgcgtcttttctggactagtctccgcccacttcttcagggacaaatcctctacact
ccggacacgccctttacgcagcaggttatggcagaggccaacagcaccttcaacgctctg
gctaaagtcggtgaactggctgatacttggctggaaaatgaggacgagatctggaacttc
ttccagaacagcaggcaaatcaacatggtccgggctctgctgcaaaaccccctcttttca
gcaattcttgatcagcggttgaatggaaccagatggtcttcagcacttatcgctaatttt
ctgttcaacggtgatgaaaaagaccggcttgcagggatgctggcattcgactggagaaac
gtcttcaacaccaccagtcaagttgcgagactcatcaagcaggtcatggagtgcttcaat
ctggacaagtttgaggccgtggccagtgagaaattgttggtggaacgggccctcgaactg
cttgatcaggagaaattttgggctggagtagtttttacagacctggatgccggcaaccca
tcactcatcagatacaagatccgcatggatgtcgaggaaaccgagaggacggataagatt
aaagacaggtcctggtttccatcggctcgtgataacccctttaacgacctacgctatgtg
agaggaggttttgtgtatcttcaggacatgctggaccgtgctatcgtccaaacacacaca
ggtgtcaaggaaactctgggtgtctatttgcagcagatgccgtatccatgctatgtggat
gatgcctttgtgtcatccattgccaccatcctaccaatgttcctggtgctgaccttcata
tatacggtgtgccagaccatcaaaggtctggtcctggagaaggagctgcggctgaaggaa
gttctccgagtggtgggtgtgggaaatggagcgctctggttctcctggttcatggagaac
ataactgtgctaacggtgccatgcacactgattagcataatgctgaagtacgggaaagtt
ctgagatatagtgacccatcagtgatcttcgtgttcctgctggtgttctgtatagccact
gtcatgcagtgcttcttcatcagtgtctttttctcaagagcaaatctggctgctgcctgc
ggtggacttatctacttcctgctctacctgccccatgtgctctgttacgcctggagagat
gtcttgaccttcccaatcaagcttgctacgagcctgctgtcatgtgtggcgtttggttat
ggctgtgagaattttgcacgatatgaagagcagggcattggcattcagtggaacaacatc
atgctcagctctcaggatgatgacccttacaccttcatcgtctcgatcatcatgatactg
attgacgctgtgctgtactggatactcacctggtacattgaaaacgtcttcccagggcag
tatggaattcccagaccttggtatttcccattaacctcctcatactggtgtgggacacca
gctggtgtggacgtagagtcagatcatctcgatgcactggaggagcagaatggttacctg
gaaaaacctcctgctaacctgaaagcaggtgtgtctataaggaacttggtgaagatttat
aagactggaaagaaactggctgtggataaactcactctggacttctaccaagaccagatc
acatcattcttaggacacaatggtgcaggaaaaactactactatgtccattctcactgga
ctcttcaccccaacatccggcacggcttacattaatggcttcgatatccgcaaggacatg
gacaatatacgcaagacgcttggcatgtgcccacaacacaacgtcttatttaatgacctc
actgtggaggagcacatttatttctatgcccgtctcaagggcagaagctccaaggaagtc
aaacaggaaatagatcaaatgatcaaagatgtagggctgccacataagcgcaaggatctc
gccaagaacctttcaggtgggatgcagaggaagttgtcggttgccatagcatttgtgggt
ggctccaacgtagtgattctggacgaaccgacagctggagtggatccgtatgccaggagg
ggaatctgggaactgctgctaaaatataaaatgggacgtaccatcattctgtccacgcac
cacatggacgaggcagatattttaggtgatcgcatcgccatcatctcccatggcaaggtc
tgctgctgtggctcctccctcttcctgaagaagacctatggcagtggctattacctcact
cttgcacgggctaatcaggacataatgacatcacaacgccatacagggtgcaaacagccc
agtgatgcctccagtttagatgaagggattggttcagcaagcatcagcaccatggaacct
gcagatgtagcagatgtctcttctgtcatacgcttgcacgtcccggaggcagagttcctc
gaggtgataggtcaggagttggtgtatgtgttgccatatgctagctcaaaagatggcagc
tttgcctcgcttttcaaagagcttgatttggagagagagcagctggggatcagtagctac
gggatctcagacaccagcttagaggagatatttctgaaagtggcagaagagacaggagtt
gatgtggaaagcaatgggaagggagagattcttcagagagactggaagagaagctctaaa
gagtctaaatcacgtcggatgagttgggccatggagcacagagacagtactgattctaaa
caagcagaaaagaaagaaaggttctccaatcgagtcgaagatggtcagcggcctgcgtgt
gtgaatggcaaaggttcatatgttatcaccggctggcctctgatcaggcatcagttcctg
gcgttgtttataaagcggtttcaccacgcaagaagaagcagaaaaggaatcattgctcag
gtggtgctcccagcgctgtttgtgtgtctctctctgattttctctctgattgtcccacca
tttgtggagtaccccagtctggaactgcaaccctggatgtatggaaaaccacagaacact
ttctacagtgctgacaggatggatgtggacgaggcggtgagggtaacacgtgctctcctt
tctgaaccaggctttggcacccgctgtatggatggcaaccctatacctaaatacccatgc
actcctttgggagcgacagactggttcactccttcggtagaccccgtcatccttgagatc
tttaagaatggaaactggagcatgcagaatccatctccagattgccagtgcagcactccc
aaacgcaaaatcatgctgccagactgccctcctggtgctggaggattaccaccaccccag
aaaactcagaacaccacagacaccctgcaggacctcacaggtcgaaatatgactgacttc
ttgctcaagacctatgcaaagtctggaaaaatacggtatggagggatctcagttggagct
ataaactctcaggtcaaactcaatgaatctgagatcattgtacttctttcagacctcaag
actttcttcaactcatcacagaacaacataactgagaggttcttccaggacttggaaata
ttactggtagatttgggaacgaaggacaatgtaaaagtgtggttctataaccagggatgg
catgcaatagtatcattcctgaatgttgccactaatgccatcctcagaggaaatcttcca
gctggtgtgcagcccaaactgtatggcatttcagcctttaatcatccgcttaacctcacc
aaacagcagctcaccaccacattgatgtcaagctctacagatgtggtggtggcgatctgt
gtgatcttcgccatgtcgtttatccctgccagctttgtcctctttctcattcaagagcgt
gtcagcaaagcaaaacatctgcagtttgtcagtggagtcaatccagctgcgtactgggtg
gccaacttcacctgggacatgtgtaattatgtcgtcccatgtctcatcgtcattgtcatc
ttcctctgcttccaacaaaaagcgtatgtttcgcctcagaaccttcctgcacttgtcctg
ctgttggtgctctatgggtgggcaatcacaccaatgatgtacccggcctcatttgtgttc
agtattcccagcacggcatatgtggttctcacctgcatcaatctcttcattggcatcaac
ggcagcattgccaccttcgtcatggagctgttcaatgacacgaacatcactaatatcaat
aacatagtgaagcaagtgttgttgatcttccctcacttctgtctgggtcgtggcctgatt
gacatggccaagaatcaggccatggcaacattcttcatcagtctgggagaggacaggttt
gaagatcccctgagctggaacatggtggggaagaatttgtttgccatgacaatacagggt
gtagtcatgtttggcttcaccctcctcatccagtacaagttcttctgtaaacccaggtta
atcactgggctgccgagatctgcaggagaagaagatgaagatgtggctcgagagcgtgag
cgagtgcagagaggcaaagcccagaatgatctactcaggatttgtgacctcaccaaggtg
tactcgggtaaaaaggttccagcagtggacaggataactgtgggtgtcccggctgctgag
tgcttcggcctactgggaattaatggggcaggaaaaaccacaacttttaaaatgctgact
ggagacattcgaccctcaggtggagaagccttcctcaatggatacagtatccgtacagag
atgagccaggtccatcagaacatgggttactgtcctcagtttgatgccattgatgacctc
ctaacaggacgagagcatctggagttctacgcacgcctcaggggggtgccagagagggag
gtcactatggtagcagagtgggggattcagaaactgggtctagtgaaatactccaacaaa
tctgcgggtacctacagcggaggaaacaagcgcaagctatctacagctatggctctgatt
ggctgcccacctcttgtctttctggatgagccgaccacagggatggatcctaaagctcgc
cgtttcctgtgggactgcatcctcagtgtgatcaaagagggtcgctcagtcatcctcacc
tcacacagtatggaggagtgtgaggctttgtgcactcggatggccatcatggtcaatggc
caatttaagtgtttgggcagcattcaacatctaaagagcaggtttggtgacggttacact
gtaatcgtacgtgtccaaggcagtccagctgatctgagtgcggttgaggagtttgtgact
cagacgtttcctggcagcgtgttgaaagagaaacaccacaacacactgcagtatcagatg
ccccacaaagagggtgctctctcacatatcttcagccagttcagcagaaaccaacacaca
ctgggagttgaggactactcagtctctcaaaccacgctggatcaggtgtttgtgaatttt
gcacgacagcagcatgatgctgaagaccgtgtgtacgagaatcctgtagatttgagtgac
gaaataccgatgcaaacacacacacaaacatacagaataaagactgaggaatga
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integrated database retrieval system
