Neoarius graeffei (lesser salmon catfish): 132882740
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Entry
132882740 CDS
T10798
Symbol
prom1b
Name
(RefSeq) prominin 1 b
KO
K06532
prominin 1
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ngra04147
]
132882740 (prom1b)
04090 CD molecules [BR:
ngra04090
]
132882740 (prom1b)
Exosome [BR:
ngra04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132882740 (prom1b)
CD molecules [BR:
ngra04090
]
Proteins
132882740 (prom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
Tweety
Claudin_2
DUF1218
Motif
Other DBs
NCBI-GeneID:
132882740
NCBI-ProteinID:
XP_060771823
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Position
3:24190682..24298466
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AA seq
888 aa
AA seq
DB search
MMRESVLQRLGLSPALGLMMMMMMICWSAAREPGAPRGDALDFGFVPAVVYETRAHYEPG
AADLLFQVVHMFLNTVQPNPFPADLIVKLLQQNMKGLTPEELQKPENIVLTLQAIYYEIG
FIVLAMLGVVFMLLMPLVGLFFCLCRCCDNCGGEMHQRHHKNADCQRGFYTFSLITSSVF
IAVGVLVAYTGSYNITSQMKNTKQLLSSNIKDLKSLASHTPAQIEYLTAQYTTAKNKILS
DLDNIGPLLGARIHNQLNRDVMPALDNVLHMAAVKVESAIKAMRDTKEALENVSMSRETL
QEATTELHRSLEAERTSLSNTLNDPACRSGNATHMCNSIQDALDRLTVSANFSGLPNVSL
QLAKLETVMETDLSYIVQKGYSAFNDTSRIVSEQTEDIVATLPKMKALLEKSGAEIIDFT
NTFPVESAVGNFTRFLTETEKDIEAFYPQIDQFDFYRWIGCVVLCCMVVLILAFNSLGLM
CGMCGHDKNATPTTRGCLSNTGGNLLMASIGFSFIFSWVLMGVVVTTFVTGGNVEKLVCE
PLANRQLFKIIDSPYLVHPGQKNFLPGMLFQNPNIDLTVGSMYSDCYENKGIYSALQLEN
QFHFFQFINRTVNNHDLAEIFEGVNVDLEGIILLGEEGKDNLINFANTGLGEINYKAYLS
EVNKGVTVVDLLSFANELETEADHLPRGALANALKGHASSIRQIHKEQIVPMEQVMKFVR
ARSSLSQSIRFLQTTAEELPTKVTNVLSAIDSAEYLITNNASHVVKKETDKYTKNLMGYL
KQYVNWVQLSLLMEVAQCKPISNIIDSLEIVGCSFIVESVNTFWFGLGGCCFFLIPSIIV
SVKLAKFYRRMDTEDVFEDKDTNIIGYLTEQLCGINYLMMSSGTETWS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgatgagggaaagtgtgctgcagaggctgggtctgtcacctgcgctggggctcatgatg
atgatgatgatgatctgctggagtgcggcgcgtgaacccggggctcctcgcggggacgcg
ctggacttcggctttgtcccggctgttgtgtacgagacacgcgcgcactacgagcccgga
gccgcggatctgctctttcaagtagtgcacatgtttctaaacacggttcagccaaaccca
ttcccagcagatctaattgtcaagcttttgcaacaaaacatgaaaggactcacaccagag
gagcttcagaagcctgagaacattgtcctaacactacaggccatttattatgagatcggc
ttcattgtgctggcaatgctgggtgttgttttcatgctgctgatgccgctggtgggttta
tttttctgcctgtgtcggtgctgtgacaactgcggaggcgagatgcaccaaagacaccac
aaaaatgctgactgccaacgaggcttctatacattctcacttatcacctcatctgtgttt
attgcagtgggtgtactggttgcctacactggaagctacaacatcacatcccagatgaaa
aataccaaacaacttctcagctccaacataaaagacctgaaatcactggccagtcataca
ccagcgcaaatcgagtatctgactgcacaatacacaacagccaaaaataaaattctgtcc
gatctagacaatattgggccattgttgggtgcacggatacacaaccagctgaatagagat
gtgatgccagctttagacaatgtactgcatatggcagcagtcaaagtggaaagtgctatt
aaagcaatgcgagacactaaggaggctttagagaatgtgagcatgtcccgagagacacta
caagaagcaactactgagctgcacaggtctttagaggcagagcgcacttcactttcaaac
acactcaatgatccagcctgtcgcagcggaaacgccacacacatgtgcaacagcatccag
gacgcacttgaccggctcactgtcagtgccaacttcagtgggctaccgaatgtcagtctt
cagttagcaaagctagaaactgtgatggagacagatctcagctatattgtacagaagggc
tactctgcttttaacgacacttccaggatagtgagtgaacagacagaagatattgtggcc
acactgcccaaaatgaaggctttgttggagaagtcaggagcagagattattgatttcact
aatacattcccagtggaatcagcagtagggaacttcactcgtttcctaacagaaaccgag
aaggacatagaagctttctacccacagattgaccagtttgacttttacagatggataggg
tgtgtggtgctgtgctgcatggttgtgctgatcctggcatttaactctctgggtttgatg
tgtggaatgtgtggccacgataagaacgccacacctacaacacgtggctgcctctcaaac
acaggcggcaatctcctcatggcaagcattggctttagcttcatcttttcatgggtgctg
atgggagttgtggtcactacatttgttactggaggaaatgtggagaagcttgtgtgtgag
cctctggccaacagacaactgtttaagatcatagactcaccatatttggtccatcctggc
caaaagaatttcctcccaggaatgctgtttcaaaaccccaatattgatcttactgttggc
agtatgtacagtgattgttatgagaataaaggcatatattctgcactacaacttgagaac
cagttccatttcttccagttcatcaacagaaccgtgaacaaccatgacctggcagagata
tttgagggggtaaatgtagatttggaaggaataatcctgctgggggaagaaggaaaagac
aatctcatcaattttgctaatacaggccttggagaaatcaactacaaggcctacctctca
gaggtcaataaaggagtaactgttgtagatcttctctcctttgccaatgaattggagact
gaggcagaccatctgccacgtggtgctctcgcaaatgcactaaagggtcatgctagcagc
atcagacagatccataaagagcaaatcgtgcccatggagcaagtcatgaaatttgtcaga
gccaggagctcattaagtcaaagtatcaggttcctacagaccacagctgaagaacttcct
acaaaagtgactaatgtgctgagtgccattgattcagctgagtatctaattaccaacaac
gcctcacatgtggtcaaaaaggagacagataaatacacaaagaatctgatgggatacctc
aaacagtatgttaactgggttcagctatcgttactgatggaggtagctcaatgcaaacct
atcagtaacatcattgactcattggagattgtgggttgcagtttcatagtggagtcagtg
aacacattctggttcggtctgggtggctgctgttttttccttatccccagtatcatcgtg
tctgtcaaacttgccaaattctaccgtagaatggacacagaggatgtatttgaagataag
gacaccaatatcattggttatcttactgagcaattatgtggcataaattacctcatgatg
agcagtggtacagagacctggagttaa
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