Neoarius graeffei (lesser salmon catfish): 132882790
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Entry
132882790 CDS
T10798
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
ngra Neoarius graeffei (lesser salmon catfish)
Brite
KEGG Orthology (KO) [BR:
ngra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ngra04515
]
132882790 (pcdh10a)
Cell adhesion molecules [BR:
ngra04515
]
Cadherins
Protocadherins
132882790 (pcdh10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
132882790
NCBI-ProteinID:
XP_060771882
LinkDB
All DBs
Position
3:38981100..39005246
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AA seq
998 aa
AA seq
DB search
MRMIWLLMSLLAGTHAQLRYTVPEEQERGTVVGNVAEDLGLDVTKLSARRFQTVPVPSSP
RTSPPPALLEVDLESGALVVRERVDREELCGRNTPCLLHLEMFLEEPLELFRVETEVLDV
NDNAPHFPRADIAVEISESATPGTRFPVDGAFDPDVGTNSLSAYAITSNEHFRLDVQTQG
DGSRYAELVLEKPLDREKQAVHRYVLTAVDGGQPQRTGTALLVVTVLDSNDNPPVFDQSV
YSVTMRENSPVGTLIIQLNATDADEGTNGDVVYTLSSHNPPHVRELFAVDARTGRVEITG
EVDYEEISTHQIHVQARDMGPNAVPAHCKVLFKLVDVNDNAPEIVFSTVTESVSERAAPG
TVVAMLSVSDRDSGENGRVTCELLGGGESEDAPPFKLKPSSLKNYYTVVTDGALDREHVE
LYTLTVVARDNGTPPLTTSKSIHVRVADENDNAPRFAQAIYEVHVTENNVPGAYIYAVTA
TDVDAGENARVTYSIEEREIQGMSVLTYVSINAENGYVYALRSFDHEQIREFTFTAHATD
CGTPELTTNATVLVIVVDQNDNAPSVIAPLGKNGTAARAPLPRSAEPGYLVTRVISTDAD
DGENARLSYSIAHGNDFGLFRMDWRSGELRTARRVTGGKRDSLLQSQLHPRAYELLIEVR
DHGQPPLSCSARIDVVLVDGAAVTLDEEGGEKEGRRSRGGARGSARSDEGAPEMTLVLLV
ALGSVSSVFLLAMIALAVQCRRKDKKFSALTCLTGDCCSCCSSCCGRRSRVRQKKLTKSD
IVLVQSKTAAQVPVEESGTGGSGAFGTHLHQHHHHCYQVCLTRESANTTDLMFLQPCCSP
SRSTTDTEHNTARGATAVLLTDQQPDIISNGSVLSGEIKHQRTELSYLDRPRRVNSSVFQ
EDIVSSKDSGHGDSEQGDSDHDATNRLHSSDLFSNCTDECKALGHSDRCWMPSFVPGDGR
HGADYRSNLHVPGMDAVMDGEHVRGFPSTFCTDVASET
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagaatgatttggttattaatgtcacttttggctggaacacatgcgcagttgcgctac
acggtgccggaggagcaggaacgcggcacagtggtgggtaatgtggctgaggatctgggc
ttagatgtcaccaagctgtctgcacgccgtttccagacggtgccggtcccaagctcgcca
cgtacatctccacctccagcactacttgaggtggacctggagagcggagcgctggtggtg
cgtgagcgtgtggaccgagaagagctgtgtggcaggaatacaccatgcctcttacatctg
gagatgttccttgaggagccgcttgagcttttccgtgtagagacagaagtgctggatgtg
aatgacaatgcaccccattttccacgtgctgacattgccgtggagatcagtgagagtgcc
acgccaggaacacgcttccctgtagacggtgccttcgacccagatgtgggcacaaactcg
ctgagtgcatacgctatcacaagcaatgagcacttccgcctggacgtacagacacaaggt
gacgggagcaggtacgcggagttggtgcttgaaaaaccactagatcgtgagaagcaggca
gtgcaccgatatgtgctcacagccgtagacggaggacagcctcagcggactggaaccgcg
ctcctggtggttaccgtgctggattcaaatgacaatccgcccgtcttcgaccagtctgtg
tattcagtcacaatgcgggagaactcccctgtgggcacgctcatcatccagctaaatgcc
actgatgcagacgagggcactaacggagacgtggtgtacacgctgagcagtcataaccca
ccacatgtacgtgaactgtttgctgttgatgcacgcacaggccgtgtggaaatcaccggg
gaggtggattacgaggagatcagcacacatcaaattcacgtccaggcccgagacatgggg
ccaaacgcagtccctgcacattgtaaggtcctgttcaaacttgtagacgtaaacgataat
gcacctgagatcgtattcagcactgtgacggagtctgttagcgagcgtgcggctcccggc
actgtagtcgccatgcttagcgtctctgacagagactcaggtgaaaatgggcgtgttacc
tgtgagctacttggtggaggggagagcgaggatgctccacccttcaagctcaagccttcc
tcgctgaagaactactacaccgtggtaacagatggagcactggaccgtgagcacgtggag
ttatacacgcttacggtggtagcacgagataatggtactccaccactgaccacgagcaag
tccatccacgtgcgtgttgcagacgagaacgacaacgcaccacgttttgcgcaggccatc
tatgaggtgcacgtgactgagaataatgtgcctggtgcgtatatctatgctgtgactgca
acggatgtggatgctggtgagaacgcacgtgtaacttactctatagaggagcgtgagatc
cagggcatgtctgtgctgacttatgtgtccatcaacgcagagaacggctacgtgtatgca
ctacgcagttttgatcatgagcaaatcagagaatttacctttacagcgcatgcaacagac
tgtgggacccctgagcttacaacaaacgccactgtcctggtgattgtagtggaccagaat
gacaatgcaccatctgtaatcgcaccactgggcaaaaacggtacagcagcacgtgccccc
ttgccccgatcagcagagccaggctatttggtgacacgagtgatctcgacagatgcagac
gatggtgaaaacgcacgtctctcatacagcattgcacatggaaatgacttcggcctgttc
cgtatggactggaggagtggtgaattgcgcaccgcacgccgagtgactggtgggaaacgg
gactcattgctgcagtcacagttacatcctcgtgcctatgagctactgatcgaggttagg
gatcatggacagccaccgctctcctgctctgcccgcattgatgtggtgcttgtggatggc
gctgcagtgaccctggatgaggaaggaggggagaaggagggtagaagatcacgtggcggg
gctcgaggttcagccaggtctgatgagggagcaccagagatgacgcttgtgctccttgtg
gcgcttggttccgtgtcatctgtatttctactcgccatgatagcgctggctgtgcagtgc
cgccggaaggacaaaaaattcagtgcacttacatgcctgacaggagattgctgctcctgt
tgtagctcgtgttgtggccgacggtcacgtgtacggcagaagaagctcaccaagtcagat
attgtgctagtgcagagcaaaacagcagcacaggtgcctgtcgaggaatctgggaccggg
ggcagtggtgcattcggcacgcaccttcatcagcaccatcaccactgctaccaggtgtgc
ctcactcgcgagtctgccaacactactgacctgatgttcctgcagccgtgttgcagcccg
tcacgcagcaccacagacacggagcacaacactgcacgtggagccaccgctgtccttctt
actgaccagcaaccggacatcatatccaatggcagtgtcttatccggagaaataaaacat
cagaggacagaactcagttacctcgatagaccacgccgtgttaacagttctgtctttcag
gaggatatagtcagctctaaagacagtgggcatggagacagcgagcagggagacagtgac
cacgatgctacaaaccgtctgcattcctctgacctgttctcaaactgtacagatgaatgt
aaagctctcggacattcggaccgttgctggatgccctcgtttgtccccggtgatggtcgc
catggtgctgattaccgtagcaacctacatgtcccggggatggatgcagtgatggacgga
gagcacgtaagaggatttcctagcacgttctgcacagacgtcgcgtcagaaacatag
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